FC875341

Overview
NameFC875341
Unique NameFC875341
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length674
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HS7C4_DICDI (Heat shock cognate 70 kDa protein 4 OS=Dictyostelium discoideum GN=DDB_G0293678 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.232e-61
Identity = 80/117 (68.38%), Postives = 94/117 (80.34%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPAD-KPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRL GR++SD+ VQ DMKLWPFKVIA   D KP+I V++KGE K F+ EEISSMVL KM+EI E +LG  + +AV+TVPAYFND QR ATK AG I+ LNV+RIINEPTA AIAYGL
Sbjct:   69 KRLFGRKYSDSVVQSDMKLWPFKVIANKFDDKPLIQVDFKGETKTFSPEEISSMVLSKMKEIVEQHLGEPVTDAVITVPAYFNDRQRHATKYAGTISNLNVLRIINEPTATAIAYGL 185          

HSP 2 Score: 100.908 bits (250), Expect = 1.232e-61
Identity = 49/68 (72.06%), Postives = 56/68 (82.35%), Query Frame = 1
Query:  130 PAIGIDLGTTYSCVGVW-QHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            P++GIDLGTTYSCVGV  +  R+EIIANDQGNRTTPSYV F + E LIGD A NQVAMNP NT+FD +
Sbjct:    2 PSMGIDLGTTYSCVGVCNEKGRIEIIANDQGNRTTPSYVSFNNRECLIGDDAMNQVAMNPVNTIFDVK 69          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: BIP4_TOBAC (Luminal-binding protein 4 OS=Nicotiana tabacum GN=BIP4 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 1.604e-61
Identity = 84/117 (71.79%), Postives = 94/117 (80.34%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYK-GEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F D  VQ DMKL P+K++     KP I V  K GE K F+ EEIS+M+L KM+E AEAYLG  IK+AVVTVPAYFND+QRQATKDAGVIAGLNV RIINEPTAAAIAYGL
Sbjct:  104 KRLIGRKFDDKEVQRDMKLVPYKIV-NKDGKPYIQVKIKDGETKIFSPEEISAMILTKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGL 219          

HSP 2 Score: 103.219 bits (256), Expect = 1.604e-61
Identity = 49/68 (72.06%), Postives = 56/68 (82.35%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            G  IGIDLGTTYSCVGV+++  VEIIANDQGNR TPS+V FTD ERLIG+AAKN  A+NP  TVFD +
Sbjct:   37 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDGERLIGEAAKNLAAVNPERTVFDVK 104          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: GRP78_CANGA (78 kDa glucose-regulated protein homolog OS=Candida glabrata GN=KAR2 PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.727e-61
Identity = 77/116 (66.38%), Postives = 93/116 (80.17%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIG +F+D SVQ D+K  PFKV+     KP++ V  KGE++ F  EEIS M+L KM++IAE YLG  + +AVVTVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAAIAYGL
Sbjct:  103 KRLIGLKFNDRSVQRDIKHLPFKVVDKDG-KPVVQVKVKGEDRVFTPEEISGMILGKMKQIAEDYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGL 217          

HSP 2 Score: 107.457 bits (267), Expect = 2.727e-61
Identity = 49/68 (72.06%), Postives = 57/68 (83.82%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            G  IGIDLGTTYSCV V ++ + EI+AN+QGNR TPSYV FTD ERLIGDAAKNQ+A NPTNT+FD +
Sbjct:   36 GTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQIAANPTNTIFDIK 103          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: BIP5_TOBAC (Luminal-binding protein 5 OS=Nicotiana tabacum GN=BIP5 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.555e-61
Identity = 82/117 (70.09%), Postives = 93/117 (79.49%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYK-GEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F D  VQ D KL P++++     KP I V  K GE K F+ EEIS+M+L KM+E AEAYLG  IK+AVVTVPAYFND+QRQATKDAGVIAGLNV RIINEPTAAAIAYGL
Sbjct:  103 KRLIGRKFDDKEVQRDKKLVPYEIV-NKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGL 218          

HSP 2 Score: 105.531 bits (262), Expect = 3.555e-61
Identity = 49/68 (72.06%), Postives = 57/68 (83.82%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            G  IGIDLGTTYSCVGV+++  VEIIANDQGNR TPS+V FTD ERLIG+AAKNQ A+NP  T+FD +
Sbjct:   36 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDGERLIGEAAKNQAAVNPERTIFDVK 103          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: GRP78_CHICK (78 kDa glucose-regulated protein OS=Gallus gallus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 4.636e-61
Identity = 83/117 (70.94%), Postives = 94/117 (80.34%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKG-EEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR ++D SVQ D+K  PFKV+   A KP I V+  G + K FA EEIS+MVL KM+E AEAYLG  + +AVVTVPAYFND+QRQATKDAG IAGLNVMRIINEPTAAAIAYGL
Sbjct:   94 KRLIGRTWNDPSVQQDIKYLPFKVVEKKA-KPHIQVDVGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGL 209          

HSP 2 Score: 106.301 bits (264), Expect = 4.636e-61
Identity = 52/69 (75.36%), Postives = 59/69 (85.51%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAR 330
            G  +GIDLGTTYSCVGV+++ RVEIIANDQGNR TPSYV FT + ERLIGDAAKNQ+  NP NTVFDA+
Sbjct:   26 GTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAK 94          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP76_YEAST (Heat shock protein SSB2 OS=Saccharomyces cerevisiae GN=SSB2 PE=1 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 4.639e-61
Identity = 81/116 (69.83%), Postives = 94/116 (81.03%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRF D SVQ DMK WPFKVI    + P+I V Y  E K F+ +EIS+MVL KM+EIAEA +G  ++ AV+TVPAYFND+QRQATKDAG I+GLNV+RIINEPTAAAIAYGL
Sbjct:   73 KRLIGRRFDDESVQKDMKTWPFKVIDVDGN-PVIEVQYLEETKTFSPQEISAMVLTKMKEIAEAKIGKKVEKAVITVPAYFNDAQRQATKDAGAISGLNVLRIINEPTAAAIAYGL 187          

HSP 2 Score: 99.7525 bits (247), Expect = 4.639e-61
Identity = 49/66 (74.24%), Postives = 55/66 (83.33%), Query Frame = 1
Query:  133 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            AIGIDLGTTYSCV  ++   VEIIAN+QGNR TPS+V FT  ERLIGDAAKNQ A+NP NTVFDA+
Sbjct:    9 AIGIDLGTTYSCVATYESS-VEIIANEQGNRVTPSFVAFTPQERLIGDAAKNQAALNPRNTVFDAK 73          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP75_YEAST (Heat shock protein SSB1 OS=Saccharomyces cerevisiae GN=SSB1 PE=1 SV=3)

HSP 1 Score: 156.377 bits (394), Expect = 4.639e-61
Identity = 81/116 (69.83%), Postives = 94/116 (81.03%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRF D SVQ DMK WPFKVI    + P+I V Y  E K F+ +EIS+MVL KM+EIAEA +G  ++ AV+TVPAYFND+QRQATKDAG I+GLNV+RIINEPTAAAIAYGL
Sbjct:   73 KRLIGRRFDDESVQKDMKTWPFKVIDVDGN-PVIEVQYLEETKTFSPQEISAMVLTKMKEIAEAKIGKKVEKAVITVPAYFNDAQRQATKDAGAISGLNVLRIINEPTAAAIAYGL 187          

HSP 2 Score: 99.7525 bits (247), Expect = 4.639e-61
Identity = 49/66 (74.24%), Postives = 55/66 (83.33%), Query Frame = 1
Query:  133 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            AIGIDLGTTYSCV  ++   VEIIAN+QGNR TPS+V FT  ERLIGDAAKNQ A+NP NTVFDA+
Sbjct:    9 AIGIDLGTTYSCVATYESS-VEIIANEQGNRVTPSFVAFTPEERLIGDAAKNQAALNPRNTVFDAK 73          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: GRP78_APLCA (78 kDa glucose-regulated protein OS=Aplysia californica PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.044e-61
Identity = 82/116 (70.69%), Postives = 90/116 (77.59%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR F D SVQ D+K +PFKV     +KP I       ++ FA EEIS+MVL KMR+IAE YLG  I NAVVTVPAYFND+QRQATKDAG IAGLNVMRIINEPTAAAIAYGL
Sbjct:  106 KRLIGRTFDDKSVQHDIKFYPFKV-TNANNKPHIQAATGEGDRSFAPEEISAMVLSKMRDIAEEYLGKKITNAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGL 220          

HSP 2 Score: 105.145 bits (261), Expect = 6.044e-61
Identity = 51/69 (73.91%), Postives = 58/69 (84.06%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAR 330
            G  IGIDLGTTYSCVGV+++ RV+IIANDQGNR TPSYV FT D ERLIGDAAKNQ+  NP NT+FD +
Sbjct:   38 GTVIGIDLGTTYSCVGVFKNGRVDIIANDQGNRITPSYVAFTADGERLIGDAAKNQLTSNPENTIFDVK 106          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP75_CANAL (Heat shock protein SSB1 OS=Candida albicans GN=SSB1 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 6.048e-61
Identity = 81/116 (69.83%), Postives = 93/116 (80.17%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR F D SVQ D+K WPFKV+     +P+I V Y  E K F+ +EISSMVL KM+EIAEA +G  ++ AVVTVPAYFND+QRQATKDAG IAGLNV+RIINEPTAAAIAYGL
Sbjct:   73 KRLIGRAFDDESVQKDIKSWPFKVVESNG-QPLIEVEYLDETKTFSPQEISSMVLTKMKEIAEAKIGKKVEKAVVTVPAYFNDAQRQATKDAGAIAGLNVLRIINEPTAAAIAYGL 187          

HSP 2 Score: 99.3673 bits (246), Expect = 6.048e-61
Identity = 49/66 (74.24%), Postives = 54/66 (81.82%), Query Frame = 1
Query:  133 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            AIGIDLGTTYSCV  +    VEIIAN+QGNR TPS+V FT  ERLIGDAAKNQ A+NP NTVFDA+
Sbjct:    9 AIGIDLGTTYSCVATYD-SAVEIIANEQGNRVTPSFVAFTSEERLIGDAAKNQAALNPKNTVFDAK 73          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP75_ZYGRC (Heat shock protein SSB OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=SSB PE=3 SV=3)

HSP 1 Score: 155.992 bits (393), Expect = 6.048e-61
Identity = 80/116 (68.97%), Postives = 94/116 (81.03%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRF D SVQ D K WPFK+I    + P++ V Y GE K F+ +EISSMVL KM+EIAEA +G  ++ AV+TVPAYFND+QRQATKDAG I+GLNV+RIINEPTAAAIAYGL
Sbjct:   73 KRLIGRRFDDESVQKDRKTWPFKLIDVEGN-PVVEVQYLGETKTFSPQEISSMVLTKMKEIAEAKIGQKVEKAVITVPAYFNDAQRQATKDAGSISGLNVLRIINEPTAAAIAYGL 187          

HSP 2 Score: 99.7525 bits (247), Expect = 6.048e-61
Identity = 49/66 (74.24%), Postives = 55/66 (83.33%), Query Frame = 1
Query:  133 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            AIGIDLGTTYSCV  ++   VEIIAN+QGNR TPS+V FT  ERLIGDAAKNQ A+NP NTVFDA+
Sbjct:    9 AIGIDLGTTYSCVATYESS-VEIIANEQGNRVTPSFVAFTPEERLIGDAAKNQAALNPENTVFDAK 73          
The following BLAST results are available for this feature:
BLAST of FC875341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HS7C4_DICDI1.232e-6168.38Heat shock cognate 70 kDa protein 4 OS=Dictyosteli... [more]
BIP4_TOBAC1.604e-6171.79Luminal-binding protein 4 OS=Nicotiana tabacum GN=... [more]
GRP78_CANGA2.727e-6166.3878 kDa glucose-regulated protein homolog OS=Candid... [more]
BIP5_TOBAC3.555e-6170.09Luminal-binding protein 5 OS=Nicotiana tabacum GN=... [more]
GRP78_CHICK4.636e-6170.9478 kDa glucose-regulated protein OS=Gallus gallus ... [more]
HSP76_YEAST4.639e-6169.83Heat shock protein SSB2 OS=Saccharomyces cerevisia... [more]
HSP75_YEAST4.639e-6169.83Heat shock protein SSB1 OS=Saccharomyces cerevisia... [more]
GRP78_APLCA6.044e-6170.6978 kDa glucose-regulated protein OS=Aplysia califo... [more]
HSP75_CANAL6.048e-6169.83Heat shock protein SSB1 OS=Candida albicans GN=SSB... [more]
HSP75_ZYGRC6.048e-6168.97Heat shock protein SSB OS=Zygosaccharomyces rouxii... [more]

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Properties
Property NameValue
Genbank descriptionC31402H03EF CTVClemen1 Citrus clementina cDNA clone C31402H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875341 ID=FC875341; Name=FC875341; organism=Citrus clementina; type=EST; length=674bp
GAGAACCCATACAAGTTTTTTATTTTTTAGATTTGAGATCTATTTTTGTT
TTTCTTCGCTGTCAAAGCAAACTACTTTATTCTCCTTTTCCTTGCTTGAG
TTTTGATAATGGCCGGAAAAGGAGAGGGACCAGCGATCGGTATCGATTTG
GGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATGACAGAGTCGAGAT
TATCGCCAATGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGGTTCA
CCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCGCCATG
AACCCCACGAACACCGTCTTTGATGCAAGAGGTTGATTGGTAGGAGATTC
AGCGATGCATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAGGTGAT
TGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAG
AGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATG
CGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCAGTCGT
TACTGTCCCTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATG
CCGGTGTCATTGCTGGGCTTAATGTGATGCGTATCATCAACGAGCCCACT
GCTGCTGCCATTGCTTATGGCCTT
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