FC875341

Overview
NameFC875341
Unique NameFC875341
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length674
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP70_BRELC (Heat shock 70 kDa protein OS=Bremia lactucae GN=HSP70 PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.812e-72
Identity = 83/116 (71.55%), Postives = 96/116 (82.76%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            K LIGR+FSD  VQ D+K WPFK+ +G     ++ V +KGE K F  EEISSMVLIKMRE+AEA++G  +KNAV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYGL
Sbjct:   74 KPLIGRKFSDPIVQADIKHWPFKLTSGWRQAQIV-VQFKGESKTFQPEEISSMVLIKMREVAEAFIGKEVKNAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGL 188          

HSP 2 Score: 128.257 bits (321), Expect = 8.812e-72
Identity = 62/74 (83.78%), Postives = 66/74 (89.19%), Query Frame = 1
Query:  109 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            MA    G ++GIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMN  NTVFDA+
Sbjct:    1 MAQSVSGYSVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNAHNTVFDAK 74          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP70_THEAN (Heat shock 70 kDa protein OS=Theileria annulata GN=TA11610 PE=3 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 1.499e-71
Identity = 87/116 (75.00%), Postives = 99/116 (85.34%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F D +VQ DMK WPFKV  GP  KP I V ++GE+K F AEEISSMVL KM+EIAE++LG ++K+ V+TVPAYFNDSQRQATKDAG IAGLNVMRIINEPTAAAIAYGL
Sbjct:   70 KRLIGRKFDDRTVQEDMKHWPFKVTNGPNGKPNIEVTFQGEKKTFHAEEISSMVLTKMKEIAESFLGKSVKDVVITVPAYFNDSQRQATKDAGTIAGLNVMRIINEPTAAAIAYGL 185          

HSP 2 Score: 116.701 bits (291), Expect = 1.499e-71
Identity = 55/68 (80.88%), Postives = 60/68 (88.24%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            GPAIGIDLGTTYSCV V++ + VEII NDQGNRTTPSYV FTDTERLIGDAAKNQ A NP NT+FDA+
Sbjct:    3 GPAIGIDLGTTYSCVAVYKDNNVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQEARNPENTIFDAK 70          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP70_NEUCR (Heat shock 70 kDa protein OS=Neurospora crassa GN=hsps-1 PE=2 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 1.955e-71
Identity = 87/116 (75.00%), Postives = 97/116 (83.62%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+FSD  VQ DMK +PFKVI     KP+I V +KGE K F  EEIS+M+L KM+E AEAYLG T+ NAVVTVPAYFNDSQRQATKDAG+IAGLNV+RIINEPTAAAIAYGL
Sbjct:   69 KRLIGRKFSDPEVQADMKHFPFKVI-DRGGKPVIQVEFKGETKVFTPEEISAMILQKMKETAEAYLGGTVNNAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL 183          

HSP 2 Score: 123.635 bits (309), Expect = 1.955e-71
Identity = 57/67 (85.07%), Postives = 63/67 (94.03%), Query Frame = 1
Query:  130 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            PA+GIDLGTTYSCVGV++ DR EIIANDQGNRTTPS+V FTDTERL+GDAAKNQVAMNP NTVFDA+
Sbjct:    3 PAVGIDLGTTYSCVGVFREDRCEIIANDQGNRTTPSFVAFTDTERLVGDAAKNQVAMNPANTVFDAK 69          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP74_PARLI (Heat shock 70 kDa protein IV OS=Paracentrotus lividus GN=HSP70IV PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.325e-71
Identity = 80/116 (68.97%), Postives = 95/116 (81.90%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRF+D+S+Q DMK WPF+VI     KPM+   Y GE K  + EE+SSMVL KM+E AEAYLG  + +AV+TVPAYFND+QRQATKDAGVIAG+NV+RIINEPT AA+AYGL
Sbjct:   71 KRLIGRRFNDSSIQADMKHWPFRVI-NKDGKPMLQAEYMGETKTLSPEEVSSMVLTKMKETAEAYLGKKVTSAVITVPAYFNDAQRQATKDAGVIAGINVLRIINEPTRAALAYGL 185          

HSP 2 Score: 128.257 bits (321), Expect = 3.325e-71
Identity = 60/68 (88.24%), Postives = 66/68 (97.06%), Query Frame = 1
Query:  127 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            GPAIGIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNPTNT+FDA+
Sbjct:    4 GPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTIFDAK 71          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP68_DROME (Heat shock protein 68 OS=Drosophila melanogaster GN=Hsp68 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 4.337e-71
Identity = 84/116 (72.41%), Postives = 96/116 (82.76%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGRRF D+ +Q D+K WPFKVI     KP I V +KG  K F+ EEISSMVL KM+E AEAYLG T+K+AV+TVPAYFNDSQRQATKDAG IAG+NV+RIINEPTAAA+AYGL
Sbjct:   68 KRLIGRRFDDSKIQEDIKHWPFKVI-NDNGKPKISVEFKGANKCFSPEEISSMVLTKMKETAEAYLGTTVKDAVITVPAYFNDSQRQATKDAGAIAGINVLRIINEPTAAALAYGL 182          

HSP 2 Score: 122.865 bits (307), Expect = 4.337e-71
Identity = 58/67 (86.57%), Postives = 64/67 (95.52%), Query Frame = 1
Query:  130 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            PAIGIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNP N+VFDA+
Sbjct:    2 PAIGIDLGTTYSCVGVFQYGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPKNSVFDAK 68          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP70_HYDMA (Heat shock 70 kDa protein OS=Hydra magnipapillata GN=HSP70.1 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.655e-71
Identity = 83/116 (71.55%), Postives = 93/116 (80.17%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F+D SV  D K WPF VI     +P I V +KGE K F  EEISSMVL+KM EIA+AYLG  + + V+TVPAYFNDSQRQATKDAGVIAGLNV+RIINEPTAAAIAYGL
Sbjct:   71 KRLIGRKFNDPSVTSDRKHWPFNVI-DDGSRPKIQVEFKGETKSFYPEEISSMVLLKMEEIADAYLGKKVTDVVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 185          

HSP 2 Score: 127.872 bits (320), Expect = 5.655e-71
Identity = 60/69 (86.96%), Postives = 66/69 (95.65%), Query Frame = 1
Query:  124 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            + PAIGIDLGTTYSCVGV+QH +VEIIAN+QGNRTTPSYV FTDTERLIGDAAKNQVAMNP+NTVFDA+
Sbjct:    3 KAPAIGIDLGTTYSCVGVFQHGKVEIIANEQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPSNTVFDAK 71          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HS7C3_DICDI (Heat shock cognate 70 kDa protein 3 OS=Dictyostelium discoideum GN=DDB_G0293674 PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.656e-71
Identity = 84/117 (71.79%), Postives = 96/117 (82.05%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPAD-KPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+FSD+ VQ DMK WPFKVI    D KP+I V++KGE K F+ EEISSMVL KM+E AE+YLG  + NAV+TVPAYFND QRQATKDAG I+ LNV RIINEP+AAAIAYGL
Sbjct:   68 KRLIGRKFSDSVVQSDMKHWPFKVITNKNDDKPLIQVDFKGETKTFSPEEISSMVLSKMKETAESYLGKPVNNAVITVPAYFNDGQRQATKDAGTISKLNVQRIINEPSAAAIAYGL 184          

HSP 2 Score: 124.79 bits (312), Expect = 5.656e-71
Identity = 59/66 (89.39%), Postives = 62/66 (93.94%), Query Frame = 1
Query:  133 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            +IGIDLGTTYSCVGVW +DRVEIIANDQGNRTTPSYV F DTERLIGDAAKNQVAMNP NTVFDA+
Sbjct:    3 SIGIDLGTTYSCVGVWLNDRVEIIANDQGNRTTPSYVAFNDTERLIGDAAKNQVAMNPINTVFDAK 68          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP7C_DANRE (Heat shock cognate 71 kDa protein OS=Danio rerio GN=hspa8 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.636e-70
Identity = 82/115 (71.30%), Postives = 90/115 (78.26%), Query Frame = 3
Query:  330 RLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            RL GR+F D  VQ DMK WPF VI     +P + V YKGE K F  EEISSMVL KM+EIAEAYLG T+ NAV+TVPAY NDSQRQATKDAG I+GLNV+ IINEPTAAAIAYGL
Sbjct:   72 RLNGRQFDDGVVQSDMKHWPFNVI-NDNSRPKVQVEYKGESKSFYPEEISSMVLTKMKEIAEAYLGKTVSNAVITVPAYSNDSQRQATKDAGTISGLNVLVIINEPTAAAIAYGL 185          

HSP 2 Score: 129.798 bits (325), Expect = 1.636e-70
Identity = 61/68 (89.71%), Postives = 65/68 (95.59%), Query Frame = 1
Query:  124 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDA 327
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNPTNTV DA
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVLDA 70          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP76_PIG (Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.782e-70
Identity = 82/116 (70.69%), Postives = 99/116 (85.34%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F+D +VQ D+K WPF+V++    KP + V+Y+GE+K F  EEISSMVL KM+E AEAYLG  +++AV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYGL
Sbjct:   73 KRLIGRKFADPTVQSDLKHWPFQVVS-EGGKPKVRVSYRGEDKAFYPEEISSMVLSKMKETAEAYLGQPVRHAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGL 187          

HSP 2 Score: 120.939 bits (302), Expect = 2.782e-70
Identity = 56/66 (84.85%), Postives = 62/66 (93.94%), Query Frame = 1
Query:  133 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            AIGIDLGTTYSCVGV+QH RVEI+ANDQGNRTTPSYV FTDTERL+GDAAK+Q A+NP NTVFDA+
Sbjct:    8 AIGIDLGTTYSCVGVFQHGRVEILANDQGNRTTPSYVAFTDTERLVGDAAKSQAALNPQNTVFDAK 73          
BLAST of FC875341 vs. ExPASy Swiss-Prot
Match: HSP72_CANAL (Heat shock protein SSA2 OS=Candida albicans GN=SSA2 PE=1 SV=3)

HSP 1 Score: 170.244 bits (430), Expect = 3.628e-70
Identity = 88/116 (75.86%), Postives = 98/116 (84.48%), Query Frame = 3
Query:  327 KRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 674
            KRLIGR+F D  VQGD+K +PFKV+   A KPMI V YKGE K F+ EEISSM+L KM+E AE +LG T+K+AVVTVPAYFNDSQRQATKDAG IAGLNVMRIINEPTAAAIAYGL
Sbjct:   69 KRLIGRKFDDHEVQGDIKHFPFKVV-DKASKPMIQVEYKGETKTFSPEEISSMILGKMKETAEGFLGTTVKDAVVTVPAYFNDSQRQATKDAGTIAGLNVMRIINEPTAAAIAYGL 183          

HSP 2 Score: 116.316 bits (290), Expect = 3.628e-70
Identity = 55/66 (83.33%), Postives = 60/66 (90.91%), Query Frame = 1
Query:  133 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAR 330
            A+GIDLGTTYSCV  + +DRVEIIANDQGNRTTPS+V FTDTERLIGDAAKNQ AMNP NTVFDA+
Sbjct:    4 AVGIDLGTTYSCVAHFANDRVEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMNPANTVFDAK 69          
The following BLAST results are available for this feature:
BLAST of FC875341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_BRELC8.812e-7271.55Heat shock 70 kDa protein OS=Bremia lactucae GN=HS... [more]
HSP70_THEAN1.499e-7175.00Heat shock 70 kDa protein OS=Theileria annulata GN... [more]
HSP70_NEUCR1.955e-7175.00Heat shock 70 kDa protein OS=Neurospora crassa GN=... [more]
HSP74_PARLI3.325e-7168.97Heat shock 70 kDa protein IV OS=Paracentrotus livi... [more]
HSP68_DROME4.337e-7172.41Heat shock protein 68 OS=Drosophila melanogaster G... [more]
HSP70_HYDMA5.655e-7171.55Heat shock 70 kDa protein OS=Hydra magnipapillata ... [more]
HS7C3_DICDI5.656e-7171.79Heat shock cognate 70 kDa protein 3 OS=Dictyosteli... [more]
HSP7C_DANRE1.636e-7071.30Heat shock cognate 71 kDa protein OS=Danio rerio G... [more]
HSP76_PIG2.782e-7070.69Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6... [more]
HSP72_CANAL3.628e-7075.86Heat shock protein SSA2 OS=Candida albicans GN=SSA... [more]

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Properties
Property NameValue
Genbank descriptionC31402H03EF CTVClemen1 Citrus clementina cDNA clone C31402H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875341 ID=FC875341; Name=FC875341; organism=Citrus clementina; type=EST; length=674bp
GAGAACCCATACAAGTTTTTTATTTTTTAGATTTGAGATCTATTTTTGTT
TTTCTTCGCTGTCAAAGCAAACTACTTTATTCTCCTTTTCCTTGCTTGAG
TTTTGATAATGGCCGGAAAAGGAGAGGGACCAGCGATCGGTATCGATTTG
GGGACGACGTACTCCTGCGTCGGAGTCTGGCAGCATGACAGAGTCGAGAT
TATCGCCAATGACCAAGGGAACCGGACGACGCCGTCTTATGTGGGGTTCA
CCGACACGGAGCGTTTGATCGGGGACGCTGCTAAGAACCAGGTCGCCATG
AACCCCACGAACACCGTCTTTGATGCAAGAGGTTGATTGGTAGGAGATTC
AGCGATGCATCAGTCCAAGGCGATATGAAGCTATGGCCATTTAAGGTGAT
TGCTGGACCTGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAG
AGAAGCAGTTTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATG
CGTGAGATTGCTGAGGCTTACCTTGGCGCAACTATTAAGAATGCAGTCGT
TACTGTCCCTGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATG
CCGGTGTCATTGCTGGGCTTAATGTGATGCGTATCATCAACGAGCCCACT
GCTGCTGCCATTGCTTATGGCCTT
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