FC875348
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875348 vs. ExPASy Swiss-Prot
Match: RS7_THEGJ (30S ribosomal protein S7P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rps7p PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.057e-31 Identity = 79/191 (41.36%), Postives = 108/191 (56.54%), Query Frame = 1 Query: 148 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNN----------------GKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYA 672 ++K+F RW+ EDV VND SL YI ++ +PH+ GR++ K F KAQ IVERL N +M G ++ KK+ A +VK A II T QNPIQV++ A+ NS PRED T I G+ AVD+SPLRR++ A+ + GA +RN T A+ LA+E+I AA S+A Sbjct: 14 ELKVFGRWSVEDVTVNDPSLRPYIALEPR----ILPHSHGRHAKKPFGKAQVHIVERLINKVMRSGASHYKAGGHFMRREHRSIMSKKMKAYEVVKEAFMIIERRTKQNPIQVLIRAIENSAPREDTTTIAFGGIRYHMAVDVSPLRRLDVALKNIALGASIKCYRNKTTYAQALAEEIIAAANRDPKSFA 200
BLAST of FC875348 vs. ExPASy Swiss-Prot
Match: RS7_CENSY (30S ribosomal protein S7P OS=Cenarchaeum symbiosum GN=rps7p PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.180e-30 Identity = 78/183 (42.62%), Postives = 111/183 (60.66%), Query Frame = 1 Query: 157 LFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMH---------GRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIK 678 LF +W D++V D L I ++ +P+T GR ++KRF KA IVERL N MMH GR GKK+ ++ VK A EII+L T +NP++V+V AV NS P ED TRI G V +VD+SPLRRV+ A+ + G +E+AFR K++ E LA+ LI AA ++++ ++K Sbjct: 9 LFRKWDLSDIEVVDPGLKTAISLRKMT----LPYTYGRSALKRFNKADANIVERLANK-MMHFGKKYAKNTGRMAGKKMGSINTVKTAFEIINLKTGRNPVEVLVRAVENSAPNEDTTRIVYGGTVYHVSVDVSPLRRVDLALRFIADGVKEAAFRKPKSLEEFLAEHLILAANNTTDAPSVK 186
BLAST of FC875348 vs. ExPASy Swiss-Prot
Match: RS7_THEVO (30S ribosomal protein S7P OS=Thermoplasma volcanium GN=rps7p PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.542e-30 Identity = 70/173 (40.46%), Postives = 111/173 (64.16%), Query Frame = 1 Query: 157 LFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAI 675 LF+++ V+V+D + YI V++A + HT GR+S K +VERL N LM + GKK A +I K A +II T QNP+Q++++A+ N+GPRE+ TR+ G+ ++VD+SP RRV++A+ + TGA ++F++ K+I CLADE++ AAK ++S+AI Sbjct: 2 LFDKYDVNSVEVHDPGMVKYINVKSALNL----HTGGRFSSYYAGKINMNVVERLINKLMRTEKWTGKKYSAYKITKDAFDIIADKTKQNPLQILINAIENAGPREEVTRLKYGGIAVPKSVDVSPSRRVDEALRNIATGATNASFKSKKSIVNCLADEIMLAAKNDASSFAI 170
BLAST of FC875348 vs. ExPASy Swiss-Prot
Match: RS7_THEON (30S ribosomal protein S7P OS=Thermococcus onnurineus (strain NA1) GN=rps7p PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.013e-30 Identity = 78/191 (40.84%), Postives = 107/191 (56.02%), Query Frame = 1 Query: 148 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNN----------------GKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYA 672 ++K+ RW+ EDV VND SL YI ++ +PH+ GR++ K F KAQ IVERL N +M G ++ GKK+ A +VK A II T QNPIQV + A+ NS PRED T I G+ AVD+SPLRR++ A+ + GA +RN + A+ LA+E+I AA S+A Sbjct: 14 ELKVMGRWSVEDVVVNDPSLRPYINLEPR----ILPHSHGRHAKKPFGKAQVHIVERLINKVMRSGASSHKVGGHFMRREHRSLMGKKMKAYEVVKEAFMIIERRTKQNPIQVFIRAIENSAPREDTTTIAFGGIRYHMAVDVSPLRRLDIALKNIALGASAKCYRNKTSYAQALAEEIIAAANKDPKSFA 200
BLAST of FC875348 vs. ExPASy Swiss-Prot
Match: RS7_PYRFU (30S ribosomal protein S7P OS=Pyrococcus furiosus GN=rps7p PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.013e-30 Identity = 79/194 (40.72%), Postives = 109/194 (56.19%), Query Frame = 1 Query: 139 PHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRN----------------NGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYA 672 PH ++K+ RW+ EDV+V D SL YI ++ +PHT GR++ K F KA IVERL N +M G + N KK+ A +VK A +II T +NPIQV+V A+ N+ PRED T + G+ AVDISP+RR++ A+ + GA +RN + AE LA+E+I AA SYA Sbjct: 12 PH-EIKVMGRWSTEDVEVRDPSLKPYINLEPR----LLPHTHGRHAKKHFGKANVHIVERLINKIMRSGGSHYKVAGHFMRREHRSLNSKKVKAYEVVKEAFKIIEQRTGKNPIQVLVWAIENAAPREDTTSVMFGGIRYHVAVDISPMRRLDVALRNIALGASAKCYRNKMSFAEALAEEIILAANKDPKSYA 200
BLAST of FC875348 vs. ExPASy Swiss-Prot
Match: RS7_PYRKO (30S ribosomal protein S7P OS=Pyrococcus kodakaraensis GN=rps7p PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.629e-30 Identity = 79/191 (41.36%), Postives = 105/191 (54.97%), Query Frame = 1 Query: 148 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNN----------------GKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYA 672 +VK+ RW+ EDV V D SL YI + A +PH+ GRY+ K F KA IVERL N +M G ++ KK+ A +VK A II T QNPIQV+V A+ NS PRED T I G+ +VD+SPLRR++ A+ + GA +RN T A+ LA+E+I AA S+A Sbjct: 14 EVKVMGRWSVEDVTVEDPSLKPYINLDAR----ILPHSHGRYAKKPFGKANVHIVERLINKVMRSGASHYKAGGHFMRREHRSIMSKKMKAYEVVKEAFMIIERRTKQNPIQVLVKAIENSAPREDTTTIAFGGIRYHMSVDVSPLRRLDIALKNIALGASIKCYRNKTTYAQALAEEIIAAANKDPKSFA 200
BLAST of FC875348 vs. ExPASy Swiss-Prot
Match: RS7_HALMO (30S ribosomal protein S7P OS=Halococcus morrhuae GN=rps7p PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.434e-30 Identity = 73/192 (38.02%), Postives = 112/192 (58.33%), Query Frame = 1 Query: 115 AQSQDPSQPH-----YDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAI 675 +++ +P QP KLF RW ++ +D S YI V T V HT GR++ K+F+K++ IVERL N LM N GKK A RIV++A ++I T+++P+QV+V AV N+ PRE+ R+ G+ QAVD++P RRV+QA+ + G ++F++ E LA++L AA +YA+ Sbjct: 4 SEAPEPDQPAGAEEATGAKLFERWDVTGIEYDDPSTERYITV------TPVEHTMGRHAGKQFQKSEISIVERLINRLMQTDENTGKKQQATRIVRNAFDLIAERTEESPVQVLVSAVENAAPREETVRLKYGGISVPQAVDVAPQRRVDQALKFIAEGTHSASFKSPTDAHEALAEQLTGAANYDVQTYAV 189
BLAST of FC875348 vs. ExPASy Swiss-Prot
Match: RS7_THECE (30S ribosomal protein S7P OS=Thermococcus celer GN=rps7p PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.485e-30 Identity = 77/191 (40.31%), Postives = 106/191 (55.50%), Query Frame = 1 Query: 148 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNN----------------GKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYA 672 ++K+ RW+ EDV VND SL YI ++A +PH+ GR++ K F KA IVERL N +M G + KK+ A +VK A II T QNPIQV+V A+ NS PRED T I G+ AVD+SPLRR++ A+ + GA +RN + A+ LA+E+I AA ++A Sbjct: 14 ELKVMGRWSVEDVTVNDPSLRPYINLEAR----LLPHSHGRHAKKAFGKANVHIVERLINKVMRSGATSHKAGGHFMRRDDRSLMSKKMKAYEVVKEAFMIIERRTKQNPIQVLVRAIENSAPREDTTTIAFGGIRYHMAVDVSPLRRLDIALKNIALGASAKCYRNKTSYAQALAEEIIAAANADPKTFA 200
BLAST of FC875348 vs. ExPASy Swiss-Prot
Match: RS7_THEAC (30S ribosomal protein S7P OS=Thermoplasma acidophilum GN=rps7p PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.485e-30 Identity = 68/173 (39.31%), Postives = 109/173 (63.01%), Query Frame = 1 Query: 157 LFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAI 675 LFN++ V+++D + YI V++A + HT GR+S K +VERL N LM + GKK A +I + A +II T QNP+Q++++A+ N+GPRE+ TR+ G+ ++VD+SP RRV++A+ + TGA ++F++ K+I CLADE++ AA+ S+AI Sbjct: 2 LFNKYDVNAVEIHDPGMVKYINVKSALNL----HTGGRFSSYYAGKINMNVVERLINKLMRSEKWTGKKYSAYKITEEAFQIIAEKTKQNPLQILINAIENAGPREEVTRLKYGGIAVPKSVDVSPSRRVDEALRNIATGATNASFKSKKSIVNCLADEIMAAARNDPTSFAI 170
BLAST of FC875348 vs. ExPASy Swiss-Prot
Match: RS7_PYRHO (30S ribosomal protein S7P OS=Pyrococcus horikoshii GN=rps7p PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.650e-30 Identity = 79/194 (40.72%), Postives = 108/194 (55.67%), Query Frame = 1 Query: 139 PHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRN----------------NGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYA 672 PH ++K+ RW+ EDV+V D SL YI ++ +PHT GR++ K F KA IVERL N +M G + N KK+ A +VK A +II T +NPIQV+V A+ N+ PRED T + G+ AVDISPLRR++ A+ + GA +R + AE LA+E+I AA SYA Sbjct: 15 PH-EIKVMGRWSTEDVEVKDPSLKPYINLEPR----LLPHTHGRHAKKHFGKANVHIVERLINKVMRSGGSHYKVAGHFMRREHRSLNSKKVRAYEVVKEAFKIIEKRTGKNPIQVLVWAIENAAPREDTTSVMFGGIRYHVAVDISPLRRLDVALRNIALGASAKCYRTKMSFAEALAEEIILAANKDPKSYA 203 The following BLAST results are available for this feature:
BLAST of FC875348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875348 ID=FC875348; Name=FC875348; organism=Citrus clementina; type=EST; length=679bpback to top |