FC875375
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: MRP_CLOPE (Protein mrp homolog OS=Clostridium perfringens GN=mrp PE=3 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 3.808e-24 Identity = 64/140 (45.71%), Postives = 87/140 (62.14%), Query Frame = 2 Query: 302 ISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENR---LLEMNPEKRTI----IPTEYLGVKLVSFGFSGQGR---AIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 I N++ V S KGGVGKSTV LA LA G +VG+ DAD+ GPS+P + ++ M+ E + + + TE LG+K++S + I RGPMV+GV+NQ+ T+W ELDYL+IDMPPGT DI LT+ Q Sbjct: 37 IKNVIGVISGKGGVGKSTVTGILATQLAKKGYKVGVLDADITGPSMPRFFGINEKRADIVAMDSEGKQVKFVPVKTE-LGIKVISMNLLMEVEDDPVIWRGPMVTGVLNQMFKDTDWEELDYLLIDMPPGTSDITLTVMQ 175
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: MRP_RICTY (Protein mrp homolog OS=Rickettsia typhi GN=mrp PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.973e-24 Identity = 62/159 (38.99%), Postives = 92/159 (57.86%), Query Frame = 2 Query: 221 VNKVNVTMSAQPARPIFAEQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTEYLGVKLVSFGF--SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 VN + + + + A++ ++ + I+ V+S KGGVGKST++ +A L+ +VGI DAD+YGPS+P + + E R IIP ++++S GF I RGPM S +I QLL+ T W LDYL+IDMPPGTGDI L++ + Sbjct: 69 VNNITIVFTQKKTIDKKAQKPKHFVENVKKIILVASGKGGVGKSTISALIAQQLSLENYQVGIVDADIYGPSIPHIFGINE--IPKTVEGR-IIPILAQNIQIISIGFFVKAHSAIIYRGPMASKIIYQLLSNTRWNNLDYLIIDMPPGTGDIHLSMLE 224
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NUBPL_MOUSE (Nucleotide-binding protein-like OS=Mus musculus GN=Nubpl PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.495e-24 Identity = 63/140 (45.00%), Postives = 86/140 (61.43%), Query Frame = 2 Query: 293 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGAR--VGIFDADVYGPSLPTMVSPENRLLEMNPE---KRTIIPTEYLGVKLVSFGFSGQGRA--IMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 ++ + ++ V+S KGGVGKST AVNLA LA + VG+ D DVYGPS+P M++ L NPE + P G+ +S GF + A + RG MV I +LL +WG+LDYLV+DMPPGTGD+QL++ Q Sbjct: 63 IEGVREVIVVASGKGGVGKSTTAVNLALALAANDSSKAVGLLDVDVYGPSIPKMMN-----LRGNPELSPNNLMRPLLNYGIACMSMGFLVEETAPLVWRGLMVMSAIEKLLRQVDWGQLDYLVVDMPPGTGDVQLSVSQ 197
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NUBPL_HUMAN (Nucleotide-binding protein-like OS=Homo sapiens GN=NUBPL PE=1 SV=3) HSP 1 Score: 109.383 bits (272), Expect = 1.890e-23 Identity = 61/140 (43.57%), Postives = 86/140 (61.43%), Query Frame = 2 Query: 293 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGAR--VGIFDADVYGPSLPTMVSPENRLLEMNPE---KRTIIPTEYLGVKLVSFGFSGQGR--AIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 ++ + ++ V+S KGGVGKST AVNLA LA + +G+ D DVYGPS+P M++ L+ NPE + P G+ +S GF + + RG MV I +LL +WG+LDYLV+DMPPGTGD+QL++ Q Sbjct: 63 IEGVKQVIVVASGKGGVGKSTTAVNLALALAANDSSKAIGLLDVDVYGPSVPKMMN-----LKGNPELSQSNLMRPLLNYGIACMSMGFLVEESEPVVWRGLMVMSAIEKLLRQVDWGQLDYLVVDMPPGTGDVQLSVSQ 197
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NUBP2_NEMVE (Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Nematostella vectensis GN=v1g229988 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.600e-22 Identity = 57/143 (39.86%), Postives = 87/143 (60.84%), Query Frame = 2 Query: 281 LPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTII---PTEYLGVKLVSFGF---SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 +P+GL+ + +I+ V S KGGVGKSTVA L++ L G +VG+ D D+ GPS+P M++ EN + + + P + LGV +S GF S + + RGP + +I Q L+ WG++DYL+ID PPGT D +T+ + Sbjct: 5 VPQGLRSVKHIILVLSGKGGVGKSTVATQLSWALYNQGNKVGLLDIDLCGPSIPRMMNVENNDVHQCSDGWVPVYTGPDQRLGV--MSIGFLLHSKEDAVVWRGPKKNAMIKQFLSDVCWGDIDYLIIDTPPGTSDEHITVVE 145
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: CFD1_KLULA (Cytosolic Fe-S cluster assembly factor CFD1 OS=Kluyveromyces lactis GN=CFD1 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.940e-22 Identity = 59/143 (41.26%), Postives = 83/143 (58.04%), Query Frame = 2 Query: 281 LPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEK--RTIIPTEYLG-VKLVSFGFSGQGR---AIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 +PE L+ I +I+ V S KGGVGKS+V A TL G +VG+ D D+ GPSLP M EN+ + + +PT G +KL+S GF R + RGP S +I Q + +WG+LDYL+ID PPGT D +++ + Sbjct: 10 MPESLKDIKHIILVLSGKGGVGKSSVTTQTALTLCLKGYKVGVLDIDLTGPSLPRMFGLENKQVYQASKGWIPVSVPTTSGGELKLMSLGFLLDDRGNSVVWRGPKKSAMIKQFIKDVDWGDLDYLIIDTPPGTSDEHISIAE 152
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: Y949_PYRHO (Uncharacterized ATP-binding protein PH0949 OS=Pyrococcus horikoshii GN=PH0949 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.940e-21 Identity = 65/152 (42.76%), Postives = 91/152 (59.87%), Query Frame = 2 Query: 275 EQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEK-----RTIIP--TEYLG----VKLVSFGF--SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 +++ E +K +AV S KGGVGKSTVAVNL LA MG VGI DAD++GP++ M+ + E+ EK +IP T+++G +K++S G I RGP+V+ I QLL +WG LD+++ID PPGTGD LT+ Q Sbjct: 20 QRIKEKEKKWKYKIAVLSGKGGVGKSTVAVNLTAALAKMGYFVGILDADIHGPNVAKMLGVDKE--EVYAEKFDDGHFEMIPPTTDFMGQVTPIKVMSMGMMVPEDQPVIWRGPLVTKAIKQLLGDVKWGSLDFMIIDFPPGTGDEILTVVQ 169
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: CFD1_YEAST (Cytosolic Fe-S cluster assembly factor CFD1 OS=Saccharomyces cerevisiae GN=CFD1 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.940e-21 Identity = 56/139 (40.29%), Postives = 82/139 (58.99%), Query Frame = 2 Query: 293 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPE--KRTIIPTEYLG-VKLVSFGF--SGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 L I +I+ + S KGGVGKS+V A TL MG +VG+ D D+ GPSLP M EN + PE + + T G + ++S GF +G +++ RGP + +I Q ++ WGELDYL+ID PPGT D +++ + Sbjct: 13 LAGIKHIILILSGKGGVGKSSVTTQTALTLCSMGFKVGVLDIDLTGPSLPRMFGLENESIYQGPEGWQPVKVETNSTGSLSVISLGFLLGDRGNSVIWRGPKKTSMIKQFISDVAWGELDYLLIDTPPGTSDEHISIAE 151
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: CFD1_CANGA (Cytosolic Fe-S cluster assembly factor CFD1 OS=Candida glabrata GN=CFD1 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.721e-21 Identity = 58/141 (41.13%), Postives = 82/141 (58.16%), Query Frame = 2 Query: 287 EGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTEYLG---VKLVSFGF--SGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 + L I +I+ V S KGGVGKS+V A TL GMG VG+ D D+ GPSLP M E+ + + + IP E G + +VS GF +G +++ RGP + +I Q + WGELDYL+ID PPGT D +++ + Sbjct: 16 KSLSLIKHILLVLSGKGGVGKSSVTTQTALTLCGMGYNVGVLDIDLTGPSLPRMFGIEDSSIYQSADGWMPIPVETNGKGKLCVVSLGFLLGSRGTSVVWRGPKKTSMIRQFIKDVTWGELDYLLIDTPPGTSDEHISIAE 156
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: CFD1_ASHGO (Cytosolic Fe-S cluster assembly factor CFD1 OS=Ashbya gossypii GN=CFD1 PE=3 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 6.721e-21 Identity = 59/143 (41.26%), Postives = 82/143 (57.34%), Query Frame = 2 Query: 284 PEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEK--RTIIPT--EYLGVKLVSFGFSGQGR---AIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 PE L++I +IV V S KGGVGKS+V L LA G +VGI D D+ GPSLP MV E + + P +PT E ++++S GF R + RGP + +I Q ++ WG LDYL+ID PPGT D +++ + Sbjct: 9 PESLREIEHIVLVLSGKGGVGKSSVTTQLGMALACRGLKVGILDIDLTGPSLPRMVGMEGKSVLQGPRGWIPVDVPTGMEQGCLRVMSLGFLLDDRGDSVVWRGPKKTAMIKQFISDVYWGALDYLLIDTPPGTSDEHISIAE 151 The following BLAST results are available for this feature:
BLAST of FC875375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875375 ID=FC875375; Name=FC875375; organism=Citrus clementina; type=EST; length=693bpback to top |