FC875375
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NUBP1_DICDI (Cytosolic Fe-S cluster assembly factor NUBP1 homolog OS=Dictyostelium discoideum GN=nubp1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16 Identity = 50/141 (35.46%), Postives = 79/141 (56.03%), Query Frame = 2 Query: 278 QLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLA-GMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEK-RTIIPTEYLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 ++ E ++ + N + V S KGGVGKST + L++ L+ VG+ D D+ GPS+P ++ E + ++ + + + L V V F + A++ RGP +G+I Q L W +LDYLVID PPGT D L++ Q Sbjct: 49 EIEERMKTVKNKILVLSGKGGVGKSTFSSQLSFALSMDEKVEVGLLDIDICGPSIPKIMGLEGENIHISGQGWDPVYVQDNLAVMSVGFLLEKEEDAVIWRGPKKNGIIKQFLKDVYWNDLDYLVIDTPPGTSDEHLSIVQ 189
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NBP35_YARLI (Cytosolic Fe-S cluster assembly factor NBP35 OS=Yarrowia lipolytica GN=NBP35 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16 Identity = 52/140 (37.14%), Postives = 78/140 (55.71%), Query Frame = 2 Query: 281 LPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAG-MGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRT-IIPTEYLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 + + ++ + + + V S KGGVGKST + L + A + VG+ D D+ GPSLP M+ E + + + I ++ LG+ V F Q AI+ RG +G+I Q L +WG LDYLV+D PPGT D L++ Q Sbjct: 66 IKDRMKGVKHKILVLSGKGGVGKSTFSSLLGWGFASDLDREVGLMDIDICGPSLPKMMGSEGEQIHTSLSGWSPIYVSDNLGMMSVGFMLPNQDDAIIWRGAKKNGLIKQFLKDVDWGNLDYLVVDTPPGTSDEHLSVTQ 205
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NUBP1_AEDAE (Cytosolic Fe-S cluster assembly factor NUBP1 homolog OS=Aedes aegypti GN=AAEL010360 PE=3 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.713e-16 Identity = 52/137 (37.96%), Postives = 75/137 (54.74%), Query Frame = 2 Query: 287 EGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGAR--VGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTEYLGVKLVSFGF---SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLT 682 E L+++ N + V S KGGVGKSTV L+ +A + G+ D D+ GPS P ++ + + + + E + L+S GF S I RGP +G+I Q LT +WG+LDYLV+D PPGT D L+ Sbjct: 56 EKLKEVRNKILVLSGKGGVGKSTVTALLSRAMAQLNPERNYGVLDVDICGPSQPRVLGVLGEQVHQSGSGWSPVYVED-NLSLMSIGFLLGSPDDAIIWRGPKKNGMIRQFLTEVDWGQLDYLVLDTPPGTSDEHLS 191
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NBP35_GIBZE (Cytosolic Fe-S cluster assembly factor NBP35 OS=Gibberella zeae GN=NBP35 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.922e-16 Identity = 50/134 (37.31%), Postives = 76/134 (56.72%), Query Frame = 2 Query: 293 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLA-GMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTII-PTEYLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTL 685 L+ + + + V S KGGVGKST LA+ A + VGI D D+ GPS+P M+ E + ++ + I + L V + F + A++ RGP +G+I Q L EWG+LD+L++D PPGT D L++ Sbjct: 74 LENVKHKILVLSGKGGVGKSTFTSLLAHAFATNPDSNVGIMDTDICGPSIPKMMGVEGETVHVSGTGWSPIWVMDNLAVMSIQFLLPNRDDAVIWRGPKKNGLIKQFLKDVEWGDLDFLLVDTPPGTSDEHLSV 207
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: CFD1_PHANO (Cytosolic Fe-S cluster assembly factor CFD1 OS=Phaeosphaeria nodorum GN=CFD1 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.817e-16 Identity = 53/154 (34.42%), Postives = 75/154 (48.70%), Query Frame = 2 Query: 293 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPE------------------KRTIIPTEYLGVKLVSFGFSGQGRA---IMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 L + NIV V S KGGVGKS++ LA TL+ G VG+ D D+ GPS+P E + P ++T E + +S GF R+ I RGP + ++ Q LT W ++DYL+ID PPGT D ++L + Sbjct: 3 LDNVRNIVLVLSGKGGVGKSSITTQLALTLSLQGHTVGVLDIDLTGPSIPRFFGIEESKVRQAPGGWIPVDVHAQQTLSAHRLQKTAEGQEIGALSCMSLGFILPNRSDAVIWRGPKKTAMVRQFLTDVLWPKVDYLLIDTPPGTSDEHISLLE 156
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NUBP1_CULQU (Cytosolic Fe-S cluster assembly factor NUBP1 homolog OS=Culex quinquefasciatus GN=CPIJ014142 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.985e-16 Identity = 53/137 (38.69%), Postives = 74/137 (54.01%), Query Frame = 2 Query: 287 EGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLA--GMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTEYLGVKLVSFGF---SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLT 682 E L+++ N V V S KGGVGKSTV L+ +A G+ D D+ GPS P ++ + + + + E + L+S GF S I RGP +G+I Q LT +WG+LDYLV+D PPGT D L+ Sbjct: 58 EKLREVRNKVLVLSGKGGVGKSTVTALLSRAMAQHNPDRNFGVLDIDICGPSQPRVLGVLGEQVHQSGSGWSPVYIED-NLSLMSIGFLLGSPDDAIIWRGPKKNGMIRQFLTEVDWGQLDYLVLDTPPGTSDEHLS 193
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NUBP1_CAEEL (Cytosolic Fe-S cluster assembly factor NUBP1 homolog OS=Caenorhabditis elegans GN=F10G8.6 PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 4.985e-16 Identity = 50/141 (35.46%), Postives = 81/141 (57.45%), Query Frame = 2 Query: 278 QLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGAR-VGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTE-YLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 ++ + +I + + + S KGGVGKST+ NLA LA ++ V I D D+ GPS P M+ E+ + + + T + + L + ++F + A++ RG +G+I Q L +WGE+DYL+ID PPGT D ++L Q Sbjct: 49 KIQDRFSRIKHKILILSGKGGVGKSTLTSNLARALASDPSKQVAILDVDICGPSQPRMMGVEDEEVHNSADGWTPVGIQPNLTLMSIAFLLGDKNDAVIWRGARKNGMIKQFLKDVDWGEVDYLLIDTPPGTSDEHISLVQ 189
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NUBP1_CAEBR (Cytosolic Fe-S cluster assembly factor NUBP1 homolog OS=Caenorhabditis briggsae GN=CBG03788 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.985e-16 Identity = 50/141 (35.46%), Postives = 81/141 (57.45%), Query Frame = 2 Query: 278 QLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGAR-VGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTE-YLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 ++ + +I + + + S KGGVGKST+ NLA LA ++ V I D D+ GPS P M+ E+ + + + T + + L + ++F + A++ RG +G+I Q L +WGE+DYL+ID PPGT D ++L Q Sbjct: 49 KIQDRFSRIKHKILILSGKGGVGKSTLTSNLARALASDPSKQVAILDVDICGPSQPRMMGVEDEEVHNSADGWTPVGIQPNLTLMSIAFLIGDKNDAVIWRGARKNGMIKQFLKDVDWGEVDYLLIDTPPGTSDEHISLVQ 189
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: CFD1_COCIM (Cytosolic Fe-S cluster assembly factor CFD1 OS=Coccidioides immitis GN=CFD1 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.985e-16 Identity = 60/175 (34.29%), Postives = 80/175 (45.71%), Query Frame = 2 Query: 293 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLE---------------------MNPEKRTIIP-----------------TEYLG-VKLVSFGFSGQGRA---IMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 L + NIV V S KGGVGKS+V + LA T G VGI D D+ GPS+P +V E+ + +N +R P T + G ++ +S GF + R I RGP + +I Q LT WGE DYL+ID PPGT D + L + Sbjct: 3 LDGVKNIVLVLSGKGGVGKSSVTLQLALTFCLQGRSVGILDVDLTGPSIPRLVGLEDAKITQAPGGWLPVTVHPFHTPSSDGLNGSQRANKPDDSNESSSSTVETAPQSTNFCGSLRCMSLGFLLRDRGDAVIWRGPKKTAMIRQFLTDVLWGETDYLLIDTPPGTSDEHIALAE 177
BLAST of FC875375 vs. ExPASy Swiss-Prot
Match: NUBP2_DANRE (Cytosolic Fe-S cluster assembly factor nubp2 OS=Danio rerio GN=nubp2 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16 Identity = 49/138 (35.51%), Postives = 74/138 (53.62%), Query Frame = 2 Query: 293 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVS---PENRLLEMNPEKRTIIP-TEYLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 691 L ++ +++ V S KGGVGKST+ LA G +VGI D D+ GPS+P M+S PE + P + L + ++F A++ RGP + +I Q ++ WGELD L++D PPGT D L + + Sbjct: 9 LDQVKHVLLVLSGKGGVGKSTITTELALAFRHAGKKVGILDVDLCGPSIPRMLSVGKPEVHQCDSGWVPVYADPQQQQLALMSIAFLLEDSDEAVIWRGPKKTALIGQFVSDVAWGELDILLVDTPPGTSDEHLAVLE 146 The following BLAST results are available for this feature:
BLAST of FC875375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875375 ID=FC875375; Name=FC875375; organism=Citrus clementina; type=EST; length=693bpback to top |