FC875379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875379 vs. ExPASy Swiss-Prot
Match: G3PB_PEA (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Pisum sativum GN=GAPB PE=2 SV=2) HSP 1 Score: 302.368 bits (773), Expect = 1.547e-81 Identity = 149/194 (76.80%), Postives = 173/194 (89.18%), Query Frame = 3 Query: 111 MASHSALAPSRIPAITRIPSKTTHSFPTQCSTKRLDVAEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAG 692 MA+H+ALA +RIP TR PSKT+HSFP+QC++KRL+V EF+GL++ + +Y ARD+SF+D V AQLT K A GS VK TVAKLKVAINGFGRIGRNFLRCWHGRKDSPL+V+VVNDSGGVKNASHLLKYDS+LGTFKA+VKI++NETI+VDGK IKVVS+RDPL+LPWAELGIDIVIEGTGVFVDGPGAG Sbjct: 1 MATHAALASTRIPTNTRFPSKTSHSFPSQCASKRLEVGEFSGLKSTSCISYVHSARDSSFYDVVAAQLTSK-ANGSTAVKGVTVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVNDSGGVKNASHLLKYDSMLGTFKAEVKILNNETITVDGKPIKVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAG 193
BLAST of FC875379 vs. ExPASy Swiss-Prot
Match: G3PB_ARATH (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Arabidopsis thaliana GN=GAPB PE=1 SV=2) HSP 1 Score: 298.516 bits (763), Expect = 2.234e-80 Identity = 152/195 (77.95%), Postives = 169/195 (86.67%), Query Frame = 3 Query: 111 MASHSALAPSRIPAITRIPSKTT-HSFPTQCSTKRLDVAEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAG 692 MA+H+ALA SRIP R+ SK+ HSFP QCS+KRL+VAEF+GLR ++ +ASFFDAV AQ+ PK S PV+ ETVAKLKVAINGFGRIGRNFLRCWHGRKDSPL+VVV+NDSGGVKNASHLLKYDS+LGTFKA+VKIVDNETISVDGKLIKVVSNRDPL+LPWAELGIDIVIEGTGVFVDGPGAG Sbjct: 1 MATHAALAVSRIPVTQRLQSKSAIHSFPAQCSSKRLEVAEFSGLRMSSIGG------EASFFDAVAAQIIPKAVTTSTPVRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVLNDSGGVKNASHLLKYDSMLGTFKAEVKIVDNETISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAG 189
BLAST of FC875379 vs. ExPASy Swiss-Prot
Match: G3PB_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Spinacia oleracea GN=GAPB PE=1 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 3.810e-80 Identity = 152/196 (77.55%), Postives = 171/196 (87.24%), Query Frame = 3 Query: 111 MASHSALAPSRIPAITRIPSKTT--HSFPTQCSTKRLDVAEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAG 692 MASH+ALAPSRIPA TR+ SK + +SF TQCS KRLDVA+F+GLR++ T+ R+ASF D + AQLT K G+ PV+ ETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVK+A+HLLKYDS+LGTFKADVKI+DNET S+DGK IKVVSNRDPL+LPWAELGIDIVIEGTGVFVDGPGAG Sbjct: 1 MASHAALAPSRIPASTRLASKASQQYSFLTQCSFKRLDVADFSGLRSSNSVTFT---REASFHDVIAAQLTTK-PTGAAPVRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKSATHLLKYDSILGTFKADVKIIDNETFSIDGKPIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAG 192
BLAST of FC875379 vs. ExPASy Swiss-Prot
Match: G3PB_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPB PE=2 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 3.233e-71 Identity = 135/165 (81.82%), Postives = 149/165 (90.30%), Query Frame = 3 Query: 198 CSTKRLDVAEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAG 692 C +K+ +VAEFAGLR++ T++ +++SFFD V+AQLTPK S PVK ETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDS+LGTFKADVKIVDNETISVDGK IKVVS+RDPL+LPWAELGIDIVIEGTGVFVDGPGAG Sbjct: 1 CLSKKFEVAEFAGLRSSGCVTFSN--KESSFFDVVSAQLTPKTTR-STPVKGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSMLGTFKADVKIVDNETISVDGKHIKVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAG 162
BLAST of FC875379 vs. ExPASy Swiss-Prot
Match: G3PA_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Zea mays GN=GAPA PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.726e-48 Identity = 101/159 (63.52%), Postives = 117/159 (73.58%), Query Frame = 3 Query: 219 VAEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKD-SPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAG 692 ++EF+GLR++A A F AV+ + T V P + T AKLKVAINGFGRIGRNFLRCWHGR D SPLDV+ +ND+GGVK ASHLLKYDS LG F ADVK V + ISVDGK+IKVVS+R+P LPW ELGID+VIEGTGVFVD GAG Sbjct: 19 LSEFSGLRSSASLPMRRNATSDDFMSAVSFR-THAVGTSGGPRRAPTEAKLKVAINGFGRIGRNFLRCWHGRGDASPLDVIAINDTGGVKQASHLLKYDSTLGIFDADVKPVGDNAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDREGAG 176
BLAST of FC875379 vs. ExPASy Swiss-Prot
Match: G3PA_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Spinacia oleracea GN=GAPA PE=1 SV=2) HSP 1 Score: 187.578 bits (475), Expect = 5.554e-47 Identity = 99/157 (63.06%), Postives = 116/157 (73.89%), Query Frame = 3 Query: 222 AEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAG 692 +EF+GL ++ G+ D F V+ Q T V AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVV+ND+GGVK ASHLLKYDS+LGTF ADVK + ISVDGK+IKVVS+R+P+ LPW ++GID+VIEGTGVFVD GAG Sbjct: 21 SEFSGLHTSSLPFGRKGSDDLMAF--VSFQ-TNAVGGKRSSQNGVVEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAG 174
BLAST of FC875379 vs. ExPASy Swiss-Prot
Match: G3PA_ARATH (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Arabidopsis thaliana GN=GAPA PE=1 SV=3) HSP 1 Score: 187.578 bits (475), Expect = 5.554e-47 Identity = 96/156 (61.54%), Postives = 114/156 (73.08%), Query Frame = 3 Query: 225 EFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAG 692 EF+GLR+++ + + F ++ + T + + K T AKLKVAINGFGRIGRNFLRCWHGRKDSPLD++ +ND+GGVK ASHLLKYDS LG F ADVK ISVDGK+I+VVSNR+P LPW ELGIDIVIEGTGVFVD GAG Sbjct: 14 EFSGLRSSSASLPFGKKLSSDEFVSIVSFQTSAMGSSGGYRKGVTEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDIIAINDTGGVKQASHLLKYDSTLGIFDADVKPSGETAISVDGKIIQVVSNRNPSLLPWKELGIDIVIEGTGVFVDREGAG 169
BLAST of FC875379 vs. ExPASy Swiss-Prot
Match: G3PA_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPA PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.253e-47 Identity = 98/158 (62.03%), Postives = 118/158 (74.68%), Query Frame = 3 Query: 222 AEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETV-AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAG 692 +EF+GLR ++ + D +V A T + G+ K+ V AKLKVAINGFGRIGRNFLRCWHGRKDSPLDV+ +ND+GGVK ASHLLKYDS LG F ADVK V + ISVDGK+I+VVS+R+P+ LPW +LGID+VIEGTGVFVD GAG Sbjct: 12 SEFSGLRTSSAIPFGRKTNDDLL--SVVAFQTSVIGGGNS--KRGVVEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDADVKPVGTDGISVDGKVIQVVSDRNPVNLPWGDLGIDLVIEGTGVFVDREGAG 165
BLAST of FC875379 vs. ExPASy Swiss-Prot
Match: G3PA_PEA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Pisum sativum GN=GAPA PE=2 SV=2) HSP 1 Score: 185.267 bits (469), Expect = 2.756e-46 Identity = 98/158 (62.03%), Postives = 113/158 (71.52%), Query Frame = 3 Query: 222 AEFAGLRANAGATYATGARDASFFDAVTAQLTPKVAAGSVPVKKETVAK-LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAG 692 +EF+GLR ++ + F VT Q ++G AK LKVAINGFGRIGRNFLRCWHGRKDSPLDV+ +ND+GGVK ASHLLKYDS LG F ADVK V + ISVDGK+IKVVS+R+P LPW ELGID+VIEGTGVFVD GAG Sbjct: 21 SEFSGLRNSSRHLPFSRKSSDDFHSLVTFQTNAVGSSGGHKKSLVVEAKQLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDADVKPVGTDGISVDGKVIKVVSDRNPANLPWKELGIDLVIEGTGVFVDREGAG 178
BLAST of FC875379 vs. ExPASy Swiss-Prot
Match: G3PA_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Chlamydomonas reinhardtii GN=GAPA PE=1 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.333e-45 Identity = 90/124 (72.58%), Postives = 103/124 (83.06%), Query Frame = 3 Query: 321 KVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAG 692 K A V V+ E K++VAINGFGRIGRNFLRCWHGR+++ LDVV +NDSGGVK ASHLLKYDS LGTF ADVKIVD+ ISVDGK IK+VS+RDPLQLPW E+ ID+VIEGTGVF+D GAG Sbjct: 24 KAARAVVDVRAEK--KIRVAINGFGRIGRNFLRCWHGRQNTLLDVVAINDSGGVKQASHLLKYDSTLGTFAADVKIVDDSHISVDGKQIKIVSSRDPLQLPWKEMNIDLVIEGTGVFIDKVGAG 145 The following BLAST results are available for this feature:
BLAST of FC875379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 293
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875379 ID=FC875379; Name=FC875379; organism=Citrus clementina; type=EST; length=698bpback to top |