FC875382
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 1.448e-47 Identity = 95/188 (50.53%), Postives = 116/188 (61.70%), Query Frame = 2 Query: 116 CGSGVVCGERDTGHGTD---GGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYP--RRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 658 CGSG C + G G GG+LG IS MF+ +L +RN+ C + FY+Y+AFI AA++FP FG SG+ R REIAAFFAQT HETTGGW AP G YAWGYCF+ E P YC + +P KY+GRGPIQ++ NYNY C ATDPV+SFK+A+WFWMT Q P Sbjct: 57 CGSGN-CQSQCPGGGPGPGPGGDLGSAISNSMFDQMLKHRNENSCQGKNFYSYNAFINAARSFPGFGTSGDINARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERGNPGDYCPPSSQWPCAPGRKYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSP 241 HSP 2 Score: 26.9498 bits (58), Expect = 1.448e-47 Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 1 Query: 658 KPSCHEVITDEWN 696 KPSCH+VI WN Sbjct: 242 KPSCHDVIIGRWN 254
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 4.179e-47 Identity = 96/176 (54.55%), Postives = 116/176 (65.91%), Query Frame = 2 Query: 149 TGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTG--GWRDAPGGEYAWGYCFISEISPPSPYC--NLNYP-RRGK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 658 +G G L +ISRE F +L +RND CPARGFYTYDAFI AA++FPAF +G++ R REIAAF AQT HETTG GW AP G YAWGYC+ E++PPS YC + NYP GK Y+GRGP+QL+WNYNY +C ++DP +SFKSA WFWMT Q P Sbjct: 65 SGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQC--GRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSP 237 HSP 2 Score: 23.8682 bits (50), Expect = 4.179e-47 Identity = 8/13 (61.54%), Postives = 9/13 (69.23%), Query Frame = 1 Query: 658 KPSCHEVITDEWN 696 KPSCH VI W+ Sbjct: 238 KPSCHNVIIGAWS 250
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 185.652 bits (470), Expect = 4.183e-47 Identity = 96/176 (54.55%), Postives = 116/176 (65.91%), Query Frame = 2 Query: 149 TGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTG--GWRDAPGGEYAWGYCFISEISPPSPYC--NLNYP-RRGK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 658 +G G L +ISRE F +L +RND CPARGFYTYDAFI AA++FPAF +G++ R REIAAF AQT HETTG GW AP G YAWGYC+ E++PPS YC + NYP GK Y+GRGP+QL+WNYNY +C ++DP +SFKSA WFWMT Q P Sbjct: 43 SGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQC--GRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSP 215 HSP 2 Score: 23.8682 bits (50), Expect = 4.183e-47 Identity = 8/13 (61.54%), Postives = 9/13 (69.23%), Query Frame = 1 Query: 658 KPSCHEVITDEWN 696 KPSCH VI W+ Sbjct: 216 KPSCHNVIIGAWS 228
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 7.096e-47 Identity = 91/184 (49.46%), Postives = 113/184 (61.41%), Query Frame = 2 Query: 119 GSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYP--RRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 658 G G G G G GG + ++S+E+FE LL +RND CPARGFYTYDA + AA AFP F +G++ R RE+AAF QT HETTGGW AP G Y+WGYCF EI + YC + +P KY+GRGPIQL++NYNY A+DPV+SFK+A+WFWMT Q P Sbjct: 67 GGGGGGGGGGGGGGGGGGAVEAVVSKELFEQLLLHRNDAACPARGFYTYDALVTAAAAFPDFAATGDDEARKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATASYCVPSAEWPCAPDKKYFGRGPIQLSYNYNY--GPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSP 248 HSP 2 Score: 27.7202 bits (60), Expect = 7.096e-47 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 1 Query: 658 KPSCHEVITDEW 693 KPSCH+VIT +W Sbjct: 249 KPSCHDVITGQW 260
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 9.259e-47 Identity = 95/187 (50.80%), Postives = 114/187 (60.96%), Query Frame = 2 Query: 116 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLN-----YPRRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 658 C SG G G GG++G +IS MF+ +L +RND C + FY+Y+AFI AA++F FG +G+ T R REIAAFFAQT HETTGGW AP G YAWGYCF+ E P YC + P R KY+GRGPIQ++ NYNY C ATDPV+SFKSAIWFWMT Q P Sbjct: 58 CPSGPSPKPPTPGPGPSGGDIGSVISNSMFDQMLKHRNDNACQGKNNFYSYNAFINAARSFGGFGTTGDTTARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSGQWPCAPGR-KYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSP 241 HSP 2 Score: 24.6386 bits (52), Expect = 9.259e-47 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 658 KPSCHEVITDEW 693 KPSCH+VI W Sbjct: 242 KPSCHDVIIGRW 253
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 2.670e-46 Identity = 96/187 (51.34%), Postives = 114/187 (60.96%), Query Frame = 2 Query: 116 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLN-----YPRRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 658 CG G C + G G+LG +IS MF+ +L +RND C +G FY+Y+AFI AA +FP FG +G+ T R REIAAFFAQT HETTGGW AP G YAWGYCF+ E P YC + P R KY+GRGPIQ++ NYNY C ATD V+SFKSAIWFWMT Q P Sbjct: 49 CGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGR-KYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSP 231 HSP 2 Score: 26.9498 bits (58), Expect = 2.670e-46 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 658 KPSCHEVITDEW 693 KPSCH+VIT W Sbjct: 232 KPSCHDVITGRW 243
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 184.496 bits (467), Expect = 4.957e-46 Identity = 101/217 (46.54%), Postives = 125/217 (57.60%), Query Frame = 2 Query: 116 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLN--YP-RRGK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP----------------SHHATKSLPTNGTISN 706 CG G C + +G + GG L +IS + F ++L +RND C + FYTYDAF+ AAKAFP F N G+ + REIAAF QT HETTGGW AP G YAWGYCF+ E PS YC + +P GK YYGRGPIQ++WNYNY +C ATDPV+SFK+A+WFWMT Q P + A LP GT++N Sbjct: 51 CGDG--CQSQCSG-SSGGGTLSSLISGDTFNNMLKHRNDNACQGKPFYTYDAFLSAAKAFPNFANKGDTATKKREIAAFLGQTSHETTGGWPTAPDGPYAWGYCFLRE-QNPSTYCQASSEFPCASGKQYYGRGPIQISWNYNYGQC--GRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVITGGWTPSSADRAAGRLPGYGTVTN 261
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 7.698e-46 Identity = 88/171 (51.46%), Postives = 109/171 (63.74%), Query Frame = 2 Query: 158 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYP--RRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 658 G G++ IIS MF+ +L +RND C + FYTY+AFI AA++F FG +G+ T R RE+AAFFAQT HETTGGW AP G YAWGYC++ E P YC + +P KYYGRGPIQ+++NYNY C AT+ V+SFKSAIWFWMTAQ P Sbjct: 79 GPSTGDISNIISSSMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFRGFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPSYCVQSSQWPCAPGQKYYGRGPIQISYNYNYGPC--GRAIGQNLLNNPDLVATNAVVSFKSAIWFWMTAQSP 247 HSP 2 Score: 26.9498 bits (58), Expect = 7.698e-46 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 658 KPSCHEVITDEW 693 KPSCH+VIT W Sbjct: 248 KPSCHDVITGRW 259
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 1.004e-45 Identity = 91/173 (52.60%), Postives = 109/173 (63.01%), Query Frame = 2 Query: 158 GTDGGELGKIISREMFEDLLPYRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLN-----YPRRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 658 G G+LG +IS MF+ +L +RND C +G FY+Y+AFI AA +FP FG +G+ T R REIAAFFAQT HETTGGW AP G YAWGYCF+ E P YC + P R KY+GRGPIQ++ NYNY C ATD ++SFKSAIWFWMT Q P Sbjct: 60 GGSPGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSPGDYCTPSNQWPCAPGR-KYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLVATDSIISFKSAIWFWMTPQSP 229 HSP 2 Score: 26.9498 bits (58), Expect = 1.004e-45 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 658 KPSCHEVITDEW 693 KPSCH+VIT W Sbjct: 230 KPSCHDVITGRW 241
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 1.308e-45 Identity = 94/187 (50.27%), Postives = 113/187 (60.43%), Query Frame = 2 Query: 116 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLN-----YPRRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 658 CG G C + G G+LG +IS MF+ +L +RND C + FY+Y+AF+ AA +FP FG +G+ T R REIAAF AQT HETTGGW AP G YAWGYCF+ E P YC + P R KY+GRGPIQ++ NYNY C ATDPV+SFKSAIWFWMT Q P Sbjct: 53 CGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFVTAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGR-KYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSP 235 HSP 2 Score: 26.9498 bits (58), Expect = 1.308e-45 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 658 KPSCHEVITDEW 693 KPSCH+VIT W Sbjct: 236 KPSCHDVITGRW 247 The following BLAST results are available for this feature:
BLAST of FC875382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875382 ID=FC875382; Name=FC875382; organism=Citrus clementina; type=EST; length=722bpback to top |