FC875382
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 3.770e-45 Identity = 99/201 (49.25%), Postives = 121/201 (60.20%), Query Frame = 2 Query: 116 CGSGVVCGERDTGHG----------TDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLN-----YPRRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQ---PPSH 664 CG G C + +G G +DG +G I+ R++FE LL +RND CPARGFYTY+AF+ AA AFPAFG +GN R RE+AAF QT HETTGGW AP G ++WGYCF E +PPS YC + P R KYYGRGPIQL++N+NY ATD +SFK+A+WFWMT Q P SH Sbjct: 63 CGDG--CQSQCSGCGPTPTPTPPSPSDG--VGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPSPEWPCAPGR-KYYGRGPIQLSFNFNY--GPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSH 256 HSP 2 Score: 23.0978 bits (48), Expect = 3.770e-45 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 658 KPSCHEVITDEW 693 KPS H+VIT W Sbjct: 252 KPSSHDVITGRW 263
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 4.918e-45 Identity = 94/187 (50.27%), Postives = 112/187 (59.89%), Query Frame = 2 Query: 116 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLN-----YPRRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 658 CG G C + G G+LG +IS MF+ +L +RND C + FY+Y+AFI AA +FP FG +G+ T R REIAAF AQT HETTGGW AP G YAWGYCF+ E P YC + P R KY+GRGPIQ++ NYNY C ATD V+SFKSAIWFWMT Q P Sbjct: 49 CGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGR-KYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSP 231 HSP 2 Score: 26.9498 bits (58), Expect = 4.918e-45 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 658 KPSCHEVITDEW 693 KPSCH+VIT W Sbjct: 232 KPSCHDVITGRW 243
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 8.351e-45 Identity = 87/174 (50.00%), Postives = 112/174 (64.37%), Query Frame = 2 Query: 161 TDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCN-LNYP--RRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQ---PPSH 664 T GG++G+++ +F+ +L YRND RC GFYTYDAFI AA++F FG +G++ + +E+AAF AQT HETTGGW AP G YAWGYCF+SE + YC+ ++P KYYGRGPIQLT NYNY +T+P +SFK+AIWFWMT Q P SH Sbjct: 75 TGGGDVGRLVPSSLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSFNGFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPKDWPCAPGKKYYGRGPIQLTHNYNY--GLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPSSH 246 HSP 2 Score: 24.6386 bits (52), Expect = 8.351e-45 Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 652 ATKPSCHEVITDEW 693 A KPS H+VIT W Sbjct: 240 ANKPSSHDVITGRW 253
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 5.330e-44 Identity = 92/174 (52.87%), Postives = 110/174 (63.22%), Query Frame = 2 Query: 167 GGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYP-RRGK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQ--PPSHHA 670 GG + I+SR +F+ +L +RND C A+GFYTYDAF+ AA AFP FG +G+ R RE+AAF AQT HETTGGW AP G +AWGYCF E S YC + +P GK YYGRGPIQL+ NYNY ATDP +SFK+A+WFWMTAQ PS HA Sbjct: 77 GGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHA 248 HSP 2 Score: 24.2534 bits (51), Expect = 5.330e-44 Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 1 Query: 652 ATKPSCHEVITDEWN 696 A KPS H VIT +W+ Sbjct: 241 APKPSSHAVITGQWS 255
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 172.94 bits (437), Expect = 2.003e-43 Identity = 98/205 (47.80%), Postives = 119/205 (58.05%), Query Frame = 2 Query: 116 CGSGVVCGE----RDTGHG----------TDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYP-RRGK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQ--PPSHHA 670 CGS CG+ + +G G + GG + I+SR +F+ +L +RND C A+GFYTYDAF+ AA AF FG +G R RE+AAF AQT HETTGGW AP G +AWGYCF E S YC + +P GK YYGRGPIQL+ NYNY ATDP +SFK+A+WFWMTAQ PS HA Sbjct: 43 CGSTPYCGDGCQSQCSGCGGGSTPVTPTPSGGGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHA 245 HSP 2 Score: 24.2534 bits (51), Expect = 2.003e-43 Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 1 Query: 652 ATKPSCHEVITDEWN 696 A KPS H VIT +W+ Sbjct: 238 APKPSSHAVITGQWS 252
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 4.444e-43 Identity = 91/177 (51.41%), Postives = 109/177 (61.58%), Query Frame = 2 Query: 158 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYP-RRGK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQ--PPSHHA 670 GT G + IIS F+ +L +RND C A+GFYTYDAF+ AA AFP FG +G+ R R++AAF AQT HETTGGW AP G +AWGYCF E + YC + +P GK YYGRGPIQL+ NYNY ATDP +SFK+A+WFWMTAQ PS HA Sbjct: 19 GTAHGSVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHA 193 HSP 2 Score: 23.8682 bits (50), Expect = 4.444e-43 Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 1 Query: 652 ATKPSCHEVITDEWN 696 A KPS H VIT +W+ Sbjct: 186 APKPSSHAVITGKWS 200
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.700e-43 Identity = 92/177 (51.98%), Postives = 109/177 (61.58%), Query Frame = 2 Query: 158 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYP-RRGK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQP--PSHHA 670 GT G + I+SR F+ +L +RND C A+GFYTYDAF+ AA AFP FG +G+ + RE+AAF AQT HETTGGW AP G +AWGYCF E S YC + +P GK YYGRGPIQL+ NYNY ATD + FK+AIWFWMTAQP PS HA Sbjct: 19 GTARGSVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNY--GPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPPKPSSHA 193
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 8.151e-42 Identity = 89/197 (45.18%), Postives = 113/197 (57.36%), Query Frame = 2 Query: 116 CGSGVVCGERDTGH----------GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEI--SPPSPYC--NLNYPRRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 658 CGSG C + +G G G + I+SR +F+ +L +RND CPA+ FYTYDAF+ AA AFP+F +G+ R RE+AAF AQT HETTGGW AP G Y+WGYCF E + S YC + +P KYYGRGPIQ+++NYNY A+D +SFK+A WFWMT Q P Sbjct: 51 CGSG--CQSQCSGSCGGGGPTPPSGGGGSGVASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNY--GPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSP 243 HSP 2 Score: 25.409 bits (54), Expect = 8.151e-42 Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 658 KPSCHEVITDEW 693 KPSCH V+T +W Sbjct: 244 KPSCHAVMTGQW 255
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 5.219e-41 Identity = 82/169 (48.52%), Postives = 104/169 (61.54%), Query Frame = 2 Query: 176 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYP--RRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPSHHA 670 + +IS+ +FE +L +RND C A+GFYTY+AFI A K F AFG +G+ R +EIAAF AQT HETTGGW AP G Y+WGYC+ E P YC + +P KY+GRGPIQ+++NYNY A D V+SFK+A+WFWMTAQ P A Sbjct: 5 ISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQWPCAPGKKYFGRGPIQISYNYNY--GAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMTAQQPKPSA 171 HSP 2 Score: 23.8682 bits (50), Expect = 5.219e-41 Identity = 8/13 (61.54%), Postives = 10/13 (76.92%), Query Frame = 1 Query: 658 KPSCHEVITDEWN 696 KPS H+VIT W+ Sbjct: 168 KPSAHDVITGRWS 180
BLAST of FC875382 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 1.498e-40 Identity = 87/187 (46.52%), Postives = 108/187 (57.75%), Query Frame = 2 Query: 116 CGSGVVCGERDTGHGTDGGE-LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSP-YC--NLNYPRRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 658 C G CG T + GG + IIS +F+ +L +RND C A+GFYTYDAF+ AA A+P F +G+ RE+AAF AQT HETTGGW AP G Y+WGYCF E + +P YC +P KYYGRGPIQ+T+NYNY A+D +SFK+A WFWMT Q P Sbjct: 57 CSGG--CGGGPTPPSSGGGSGVASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNY--GPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSP 239 HSP 2 Score: 26.5646 bits (57), Expect = 1.498e-40 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 658 KPSCHEVITDEW 693 KPSCH VIT +W Sbjct: 240 KPSCHAVITGQW 251 The following BLAST results are available for this feature:
BLAST of FC875382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875382 ID=FC875382; Name=FC875382; organism=Citrus clementina; type=EST; length=722bpback to top |