FC875383
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CALX_HUMAN (Calnexin OS=Homo sapiens GN=CANX PE=1 SV=2) HSP 1 Score: 208.764 bits (530), Expect = 2.396e-53 Identity = 104/227 (45.81%), Postives = 131/227 (57.71%), Query Frame = 1 Query: 4 YIEHHLKNPPS----VPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFE-LDKPDFEPIAAVGIEIWTMQDGILFDTF 669 Y E H K P + +DK TH+YT IL PDN IL+D N L +D PP+ R KIPDP+AVKP+DWDEDAP +I DE+A KPEGWL A KP AP+I NP+CE+APGCG W+RP+ NP YKGKW P IDNP+Y+GIWKP++IPNP++FE L+ P +A+G+E+W+M I FD F Sbjct: 214 YEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLL--NDMTPPVNPSREIEDPEDRKPEDWDERPKIPDPEAVKPDDWDEDAPAKIPDEEATKPEGWLDDEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPRCESAPGCGVWQRPVIDNPNYKGKWKPPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNF 438
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CLGN_MOUSE (Calmegin OS=Mus musculus GN=Clgn PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.377e-47 Identity = 99/226 (43.81%), Postives = 123/226 (54.42%), Query Frame = 1 Query: 10 EHHLKNPPSVP-----SDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPD-FEPIAAVGIEIWTMQDGILFDTF 669 E H K PP V +D+ TH+YT ++ PD+ +LID + + L DD PP+ RAKIPDP AVKPEDWDE+ P +IED AVKP+GWL A KP AP I NP C+ GCGEWK PM NP YKG W P I+NPNY+G+W PQ+IPNP+YFE D P +A+G+E+W+M I FD F Sbjct: 207 EKHAK-PPDVDLKEFFTDRKTHLYTLVMNPDDTFEVLIDQKVVNQGTLL--DDVVPPINPPREIDDPSDKKPEEWDDRAKIPDPTAVKPEDWDENEPAQIEDSSAVKPDGWLDDEPKFIPNPKAEKPEDWSDDMDGEWEAPHIPNPACQI--GCGEWKPPMIDNPKYKGIWRPPMINNPNYQGLWSPQKIPNPDYFEDDHPFLLTSFSALGLELWSMTPDIYFDNF 427
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CLGN_HUMAN (Calmegin OS=Homo sapiens GN=CLGN PE=1 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 4.839e-46 Identity = 97/226 (42.92%), Postives = 120/226 (53.10%), Query Frame = 1 Query: 10 EHHLKNPPSVP-----SDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPD-FEPIAAVGIEIWTMQDGILFDTF 669 E H K PP V +D+ TH+YT ++ PD+ +L+D K + L +D PP+ RAKIPDP AVKPEDWDE P +IED VKP GWL A KP AP+I NP C GCGEWK PM NP YKG W P +DNPNY+GIW P++IPNP+YFE D P +A+G+E+W+M I FD F Sbjct: 207 EKHAK-PPDVDLKKFFTDRKTHLYTLVMNPDDTFEVLVDQTVVNKGSLL--EDVVPPIKPPKEIEDPNDKKPEEWDERAKIPDPSAVKPEDWDESEPAQIEDSSVVKPAGWLDDEPKFIPDPNAEKPDDWNEDTDGEWEAPQILNPACRI--GCGEWKPPMIDNPKYKGVWRPPLVDNPNYQGIWSPRKIPNPDYFEDDHPFLLTSFSALGLELWSMTSDIYFDNF 427
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CALX_SCHPO (Calnexin homolog OS=Schizosaccharomyces pombe GN=cal1 PE=1 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.033e-44 Identity = 99/239 (41.42%), Postives = 126/239 (52.72%), Query Frame = 1 Query: 1 EYIEHHLKN-PPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPD-FEPIAAVGIEIWTMQDGILFDTF*YQG--*ESAESIG 705 EY E HL + P S+ +T++YT I+KPD + I+G+ ++ + DF PP++ +IPDP+AVKP+DWDEDAP I D DAVKPE WL A KP +I NPKC GCGEWK PM RNP Y+G W P I NP + G W P++IPNP+YF+ D P F P+ VG E+WTMQ I F Y G E AE +G Sbjct: 182 EYSEKHLDSRPASLLKPGITNLYTLIVKPDQTFEVRINGDVVRQGSLFY--DFIPPVLPPVEIYDPEDIKPADWVDEPEIPDPNAVKPDDWDEDAPRMIPDPDAVKPEDWLEDEPLYIPDPEAQKPEDWDDEEDGDWIPSEIINPKCIEGAGCGEWKPPMIRNPNYRGPWSPPMIPNPEFIGEWYPRKIPNPDYFDDDHPSHFGPLYGVGFELWTMQPNIRFSNI-YVGHSIEDAERLG 417
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CLGN_BOVIN (Calmegin OS=Bos taurus GN=CLGN PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 7.726e-44 Identity = 96/226 (42.48%), Postives = 117/226 (51.77%), Query Frame = 1 Query: 10 EHHLKNPPSVP-----SDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPD-FEPIAAVGIEIWTMQDGILFDTF 669 E H K PP V +D+ TH+YT ++ PD+ +LID K + L +D PP+ RAKIPD AVKPEDWDE P +I D AVKP+GWL A KP AP I NP C GCGEW PM NP YKG W P IDNPNY+GIW P++IPNP+YFE + P A+G+E+W+M I FD F Sbjct: 203 EKHAK-PPDVDLKRFFTDRKTHLYTLVMNPDDTFEVLIDQIVVNKGSLL--EDVVPPINPPKEIEDPTDEKPDDWDERAKIPDASAVKPEDWDESEPPQIVDSSAVKPDGWLDNEPEFIPDPNAEKPFDWNEDMDGEWEAPHISNPACRI--GCGEWSPPMIDNPKYKGIWRPPMIDNPNYQGIWSPRKIPNPDYFEDNHPFLLTSFRALGLELWSMTSDIYFDNF 423
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CALX_CAEEL (Calnexin homolog OS=Caenorhabditis elegans GN=cnx-1 PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.969e-39 Identity = 88/224 (39.29%), Postives = 109/224 (48.66%), Query Frame = 1 Query: 10 EHHLKNPPSVPS----DKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKP--DFEPIAAVGIEIWTMQDGILFD 663 E+H P ++ S D TH++T ++KP E + +DG+ N ++ D P L R I D AVKP+DWDE+ P + DE A KP W A KP AP IDNP C+ GCG WK P +NP YKGKW P I NP +KG W + I NPNYFE KP PI AVGIE+WTM + ILFD Sbjct: 208 EYHANQPTTIGSTYWDDHNTHLFTLVVKPTGEYSVSVDGKSLYYGNMMS--DVTPALTPPKQIFDETDLKPVDWDERENIEDESAVKPDDWDENEPQSVVDEAATKPYDWNEEENELIADPEAKKPQDWDEDMDGSWEAPLIDNPACKGLSGCGTWKAPTIKNPKYKGKWIRPKISNPAFKGKWTARLIDNPNYFE-PKPFAGLAPITAVGIEMWTMSENILFD 428
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CALR_ONCVO (Calreticulin OS=Onchocerca volvulus GN=crt-1 PE=2 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 4.709e-25 Identity = 73/217 (33.64%), Postives = 96/217 (44.24%), Query Frame = 1 Query: 13 HHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPDFEPIAAVGIEIWTMQDGILFD 663 H +K D TH+YT I+ DN + IDGE+ + A DF PP KI DPDA KPEDWDE I+DED KPE W A KP P +DNP+ + GEWK K+NPAYKGKW P I+ P+Y P+ N + ++ I A+G ++W ++ G +FD Sbjct: 153 HMIKKDIRCKDDVFTHLYTLIVNSDNTYEVQIDGEKAESGELEADWDFLPP---------------------KKIKDPDAKKPEDWDERE--FIDDEDDKKPEDW--DKPEHIPDPDAKKPEDWDDEMDGEWEPPMVDNPEYK-----GEWKPKQKKNPAYKGKWIHPEIEIPDY--------TPDDNLYV-----YDDIGAIGFDLWQVKSGTIFD 326
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CALR_EUGGR (Calreticulin OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.150e-25 Identity = 66/215 (30.70%), Postives = 97/215 (45.12%), Query Frame = 1 Query: 22 KNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPD-FEPIAAVGIEIWTMQDGILFD 663 K P +D L+H YTA++K D +L+D +K+ +D++ ++ + DP+ KPEDWD++ P +I D DA +P+ W G+W+ PM NP YKG+W A I NP YKG+WKP+ IPNP Y DK F+ IAAVG ++W ++ G +FD Sbjct: 154 KKEPRCETDTLSHTYTAVIKADRTYEVLVDQVKKESGTL--EEDWE--ILKPKTIPDPEDKKPADWVDEPDMVDPEDKKPEDWDKE-PAQIPDPDATQPDDWDEEED--------------------------------------GKWEAPMISNPKYKGEWKAKKIPNPAYKGVWKPRDIPNPEYEADDKVHIFDEIAAVGFDLWQVKSGTIFD 325
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CALR_DROME (Calreticulin OS=Drosophila melanogaster GN=Crc PE=1 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 6.150e-25 Identity = 70/207 (33.82%), Postives = 91/207 (43.96%), Query Frame = 1 Query: 46 DKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPDF-EPIAAVGIEIWTMQDGILFD 663 D TH YT I++PDN +LID E+ + N DF P RA IPDPD KPEDWD+ P I D DA KPE W ++D GEW+ PM NP +KG+W +DNPNYKG W+ +I NP Y DK + I +G ++W ++ G +FD Sbjct: 166 DVYTHFYTLIVRPDNTYEVLIDNEKVESGNLEDDWDFLAP----KKIKDPTATKPEDWDDRATIPDPDDKKPEDWDK--PEHIPDPDATKPEDW----------------------------DDEMD----------GEWEPPMIDNPEFKGEWQPKQLDNPNYKGAWEHPEIANPEYVPDDKLYLRKEICTLGFDLWQVKSGTIFD 328
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CALR_RAT (Calreticulin OS=Rattus norvegicus GN=Calr PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.032e-25 Identity = 70/213 (32.86%), Postives = 96/213 (45.07%), Query Frame = 1 Query: 46 DKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPD-----FEPIAAVGIEIWTMQDGILFDTF 669 D+ TH+YT I++PDN + ID + + + DF PP KI DPDA KPEDWDE A +I+D KPE W KP P P+ GEW+ P+ +NP YKG+W IDNP+YKG W +I NP Y PD ++ A +G+++W ++ G +FD F Sbjct: 166 DEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPP---------------------KKIKDPDAAKPEDWDERA--KIDDPTDSKPEDW-------------DKPEHIPD--------PDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEY----SPDANIYAYDSFAVLGLDLWQVKSGTIFDNF 330 The following BLAST results are available for this feature:
BLAST of FC875383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875383 ID=FC875383; Name=FC875383; organism=Citrus clementina; type=EST; length=711bpback to top |