FC875383
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CALR_MOUSE (Calreticulin OS=Mus musculus GN=Calr PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.032e-25 Identity = 70/213 (32.86%), Postives = 96/213 (45.07%), Query Frame = 1 Query: 46 DKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPD-----FEPIAAVGIEIWTMQDGILFDTF 669 D+ TH+YT I++PDN + ID + + + DF PP KI DPDA KPEDWDE A +I+D KPE W KP P P+ GEW+ P+ +NP YKG+W IDNP+YKG W +I NP Y PD ++ A +G+++W ++ G +FD F Sbjct: 166 DEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPP---------------------KKIKDPDAAKPEDWDERA--KIDDPTDSKPEDW-------------DKPEHIPD--------PDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEY----SPDANIYAYDSFAVLGLDLWQVKSGTIFDNF 330
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CALR_CRIGR (Calreticulin OS=Cricetulus griseus GN=CALR PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.032e-25 Identity = 70/213 (32.86%), Postives = 96/213 (45.07%), Query Frame = 1 Query: 46 DKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPD-----FEPIAAVGIEIWTMQDGILFDTF 669 D+ TH+YT I++PDN + ID + + + DF PP KI DPDA KPEDWDE A +I+D KPE W KP P P+ GEW+ P+ +NP YKG+W IDNP+YKG W +I NP Y PD ++ A +G+++W ++ G +FD F Sbjct: 166 DEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPP---------------------KKIKDPDAAKPEDWDERA--KIDDPTDSKPEDW-------------DKPEHIPD--------PDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEY----SPDANIYAYDSFAVLGLDLWQVKSGTIFDNF 330
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CALR_RICCO (Calreticulin OS=Ricinus communis PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.049e-24 Identity = 78/236 (33.05%), Postives = 96/236 (40.68%), Query Frame = 1 Query: 13 HHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWDE----------------DAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPD---FEPIAAVGIEIWTMQDGILFD 663 H +K +D+LTHVYT +++PD ILID EKQ + D PP KI DP+A KPEDWDE D P EI D DA KPE W D+ + GEW P NP YKG W I NPNYKG WK I NP++ D P+ + + VGIE+W ++ G LFD Sbjct: 156 HLIKKEVPCETDQLTHVYTLVIRPDATYSILIDNVEKQTGSLYTDWDLLPP---------------------KKIKDPEAKKPEDWDEKEYIPDPEDKKPEGYDDIPKEIPDPDAKKPEDW--------------------------------DDEE------DGEWTAPTIANPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDF--KDDPEIYVYPNLKYVGIELWQVKSGTLFD 330
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CALR_CHLRE (Calreticulin OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.049e-24 Identity = 74/216 (34.26%), Postives = 94/216 (43.52%), Query Frame = 1 Query: 19 LKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDK-PDFEPIAAVGIEIWTMQDGILFD 663 +K +D+LTHVYT ++KPDN ++LID +E + D PP I DP A KPEDWDE EI D + KPEGW A KP G W+ PM NP YKG+W A I NP YKGIW I NP+Y DK +F+ + VG E+W ++ G +FD Sbjct: 160 IKKDIKAETDQLTHVYTLVIKPDNTYQVLIDLKEVASGSLYEDWDMLPP---------------------KTIKDPKASKPEDWDERE--EIADPEDKKPEGW-DDIPATIADKDAKKPEDWDDEED-------------------GTWEPPMIPNPEYKGEWKAKMIKNPAYKGIWVAPDIDNPDYVHDDKLYNFKDLKFVGFELWQVKSGSIFD 332
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CALR_RABIT (Calreticulin OS=Oryctolagus cuniculus GN=CALR PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.370e-24 Identity = 70/213 (32.86%), Postives = 96/213 (45.07%), Query Frame = 1 Query: 46 DKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPD-----FEPIAAVGIEIWTMQDGILFDTF 669 D+ TH+YT I++PDN + ID + + + DF PP KI DPDA KPEDWDE A +I+D KPE W KP P P+ GEW+ P+ +NP YKG+W IDNP+YKG W +I NP Y PD ++ A +G+++W ++ G +FD F Sbjct: 166 DEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPP---------------------KKIKDPDASKPEDWDERA--KIDDPTDSKPEDW-------------DKPEHIPD--------PDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEY----SPDANIYAYDSFAVLGLDLWQVKSGTIFDNF 330
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CALR_NICPL (Calreticulin OS=Nicotiana plumbaginifolia GN=CAL1 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.370e-24 Identity = 80/236 (33.90%), Postives = 95/236 (40.25%), Query Frame = 1 Query: 13 HHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWDE----------------DAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPD---FEPIAAVGIEIWTMQDGILFD 663 H +K +D+LTHVYT IL+PD ILID EKQ + + D PP I DP A KPEDWDE D P EI D DA KPE W D+ + GEW P NP YKG W I NPNYKG WK I NP++ D PD F + VG+E+W ++ G LFD Sbjct: 163 HLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPP---------------------KTIKDPSAKKPEDWDEKEFIDDPEDKKPEGYDDIPEEITDPDAKKPEDW--------------------------------DDEE------DGEWTAPTIPNPEYKGPWKPKKIKNPNYKGKWKAPLIDNPDF--KDDPDLYVFPKLKYVGVELWQVKSGTLFD 337
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CALR_BOVIN (Calreticulin OS=Bos taurus GN=CALR PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.370e-24 Identity = 70/213 (32.86%), Postives = 96/213 (45.07%), Query Frame = 1 Query: 46 DKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPD-----FEPIAAVGIEIWTMQDGILFDTF 669 D+ TH+YT I++P+N + ID + + + DF PP KI DPDA KPEDWD+ A +I+D KPE W KP P P+ GEW+ P+ +NP YKG+W IDNP YKGIW +I NP Y PD +E A +G+++W ++ G +FD F Sbjct: 166 DEFTHLYTLIVRPNNTYEVKIDNSQVESGSLEDDWDFLPP---------------------KKIKDPDAAKPEDWDDRA--KIDDPTDSKPEDW-------------DKPEHIPD--------PDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPEYKGIWIHPEIDNPEY----SPDSNIYAYENFAVLGLDLWQVKSGTIFDNF 330
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CALR_MAIZE (Calreticulin OS=Zea mays GN=CRT PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.986e-24 Identity = 77/236 (32.63%), Postives = 96/236 (40.68%), Query Frame = 1 Query: 13 HHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWD----------------EDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKP---DFEPIAAVGIEIWTMQDGILFD 663 H +K +D+LTHVYT I++PD ILID EEK + D PP KI DP+A KPEDWD +D P EI D DA KPE W D+ + GEW P NP YKG W I NPNY+G WK I NP++ D P F+ + +GIE+W ++ G LFD Sbjct: 161 HLIKKDVPCQTDQLTHVYTFIIRPDATYSILIDNEEKHTGSIYEHWDILPP---------------------KKIKDPEAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIPDPDAKKPEDW--------------------------------DDEE------DGEWTAPTIPNPEYKGPWKQKKIKNPNYQGKWKAPMIDNPDF--KDDPYIYAFDSLKYIGIELWQVKSGTLFD 335
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CALR_BOMMO (Calreticulin OS=Bombyx mori GN=crt PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.986e-24 Identity = 74/224 (33.04%), Postives = 95/224 (42.41%), Query Frame = 1 Query: 13 HHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPDF-----EPIAAVGIEIWTMQDGILFDTF 669 H +K D TH+YT I+KPDN +LID E+ + + A DF P + IPDP+ KPEDWD+ P I D DA KPE W ++D GEW+ PM NP YKG W IDNP YKG W +I NP Y PD + I AVG+++W ++ G +FD F Sbjct: 155 HLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLP----NKKIKDPEAKKPEDWDDKPTIPDPEDKKPEDWDK--PEHIPDPDATKPEDW----------------------------DDEMD----------GEWEPPMIDNPDYKGVWAPKQIDNPAYKGPWVHPEIDNPEY----TPDSNLYKRDEICAVGLDLWQVKSGTIFDDF 330
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CALR_MACFU (Calreticulin OS=Macaca fuscata fuscata GN=CALR PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.206e-24 Identity = 69/213 (32.39%), Postives = 95/213 (44.60%), Query Frame = 1 Query: 46 DKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPD-----FEPIAAVGIEIWTMQDGILFDTF 669 D+ TH+YT I++PDN + ID + + + DF PP KI DPDA KPEDWDE A +I+D KPE W KP P P+ GEW+ P+ +NP YKG+W IDNP+YKG W +I NP Y PD ++ +G+++W ++ G +FD F Sbjct: 166 DEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPP---------------------KKIKDPDASKPEDWDERA--KIDDPTDSKPEDW-------------DKPEHIPD--------PDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEY----SPDPSIYAYDNFGVLGLDLWQVKSGTIFDNF 330 The following BLAST results are available for this feature:
BLAST of FC875383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875383 ID=FC875383; Name=FC875383; organism=Citrus clementina; type=EST; length=711bpback to top |