FC875383
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CALR_MACFA (Calreticulin OS=Macaca fascicularis GN=CALR PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.206e-24 Identity = 69/213 (32.39%), Postives = 95/213 (44.60%), Query Frame = 1 Query: 46 DKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPD-----FEPIAAVGIEIWTMQDGILFDTF 669 D+ TH+YT I++PDN + ID + + + DF PP KI DPDA KPEDWDE A +I+D KPE W KP P P+ GEW+ P+ +NP YKG+W IDNP+YKG W +I NP Y PD ++ +G+++W ++ G +FD F Sbjct: 166 DEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPP---------------------KKIKDPDASKPEDWDERA--KIDDPTDSKPEDW-------------DKPEHIPD--------PDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEY----SPDPSIYAYDNFGVLGLDLWQVKSGTIFDNF 330
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CALR_HUMAN (Calreticulin OS=Homo sapiens GN=CALR PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.206e-24 Identity = 69/213 (32.39%), Postives = 95/213 (44.60%), Query Frame = 1 Query: 46 DKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPD-----FEPIAAVGIEIWTMQDGILFDTF 669 D+ TH+YT I++PDN + ID + + + DF PP KI DPDA KPEDWDE A +I+D KPE W KP P P+ GEW+ P+ +NP YKG+W IDNP+YKG W +I NP Y PD ++ +G+++W ++ G +FD F Sbjct: 166 DEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPP---------------------KKIKDPDASKPEDWDERA--KIDDPTDSKPEDW-------------DKPEHIPD--------PDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEY----SPDPSIYAYDNFGVLGLDLWQVKSGTIFDNF 330
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CALR_CERAE (Calreticulin OS=Cercopithecus aethiops GN=CALR PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.206e-24 Identity = 69/213 (32.39%), Postives = 95/213 (44.60%), Query Frame = 1 Query: 46 DKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPD-----FEPIAAVGIEIWTMQDGILFDTF 669 D+ TH+YT I++PDN + ID + + + DF PP KI DPDA KPEDWDE A +I+D KPE W KP P P+ GEW+ P+ +NP YKG+W IDNP+YKG W +I NP Y PD ++ +G+++W ++ G +FD F Sbjct: 166 DEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPP---------------------KKIKDPDASKPEDWDERA--KIDDPTDSKPEDW-------------DKPEHIPD--------PDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEY----SPDPSIYAYDNFGVLGLDLWQVKSGTIFDNF 330
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CALR_BETVU (Calreticulin OS=Beta vulgaris PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.206e-24 Identity = 77/236 (32.63%), Postives = 96/236 (40.68%), Query Frame = 1 Query: 13 HHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWD----------------EDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPD---FEPIAAVGIEIWTMQDGILFD 663 H +K +D+LTHVYT IL+PD ILID +EKQ + D P KI DP+A KPEDWD +D P EI D +A KPE W D+ + GEW P NP YKG W A I NPNYKG WK I NP + D P+ + + VG+E+W ++ G LFD Sbjct: 161 HLIKKDVPCETDQLTHVYTFILRPDATYSILIDNQEKQTGSLYTDWDLLP---------------------AKKIKDPEAKKPEDWDDKEFIPDPEDKKPEGYDDIPAEITDPEAKKPEDW--------------------------------DDEE------DGEWTAPTIPNPEYKGPWKAKKIKNPNYKGKWKAPMIDNPEF--KDDPELYVYPKLRYVGVELWQVKSGTLFD 335
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CALR_BERST (Calreticulin OS=Berberis stolonifera PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.799e-24 Identity = 75/220 (34.09%), Postives = 95/220 (43.18%), Query Frame = 1 Query: 13 HHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPD---FEPIAAVGIEIWTMQDGILFD 663 H +K +D+LTHVYT IL+PD ILID EKQ + D PP + IPDP+ KPE +D D P EI D +A KPE W D+ + GEW P NP YKG+W I NPN+KG WK I NP++ D PD F + VGIE+W ++ G +FD Sbjct: 158 HLIKKDVPCETDQLTHVYTFILRPDASYSILIDNVEKQSGSVYTDWDILPP----KQIKDPEAKKPEDWEDKEYIPDPEDKKPEGYD-DIPKEITDPEAKKPEDW--------------------------------DDEE------DGEWTAPTIPNPDYKGEWKPKKIKNPNFKGKWKAPMIDNPDF--KDDPDIYVFPKLKYVGIELWQVKSGTMFD 332
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CALR2_ARATH (Calreticulin-2 OS=Arabidopsis thaliana GN=CRT2 PE=1 SV=3) HSP 1 Score: 110.153 bits (274), Expect = 1.160e-23 Identity = 76/220 (34.55%), Postives = 96/220 (43.64%), Query Frame = 1 Query: 13 HHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPD---FEPIAAVGIEIWTMQDGILFD 663 H +K +D+LTHVYT IL+PD ILID EKQ + + D PP KI DP A KPEDWDE I D + KP+G+ + KP AP I NP+ GEWK +NP YKGKW AP IDNP++K D P+ F + VG+E+W ++ G LFD Sbjct: 158 HLIKKDVPCETDQLTHVYTFILRPDATYSILIDNVEKQTGSLYSDWDLLPP---------------------KKIKDPSAKKPEDWDEQE--YISDPEDKKPDGY-DDIPKEIPDTDSKKPEDWDDEEDGEWTAPTIPNPEY-----MGEWKPKQIKNPNYKGKWEAPLIDNPDFK----------------DDPELYVFPKLKYVGLELWQVKSGSLFD 332
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CALR_ORYSJ (Calreticulin OS=Oryza sativa subsp. japonica GN=Os07g0246200 PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.515e-23 Identity = 76/238 (31.93%), Postives = 96/238 (40.34%), Query Frame = 1 Query: 13 HHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWD----------------EDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKP---DFEPIAAVGIEIWTMQDGILFDTF 669 H +K +D+L+HVYT I+ PD ILID EKQ + D PP +I DP+A KPEDWD +D P EI D DA KPE W D+ + GEW P NP YKG W I NPNY+G WK I NP++ D P F+ + +GIE+W ++ G LFD F Sbjct: 165 HLIKKDVPCETDQLSHVYTLIIHPDATYTILIDNVEKQSGSIYEHWDILPP---------------------KQIKDPEAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIPDPDAKKPEDW--------------------------------DDEE------DGEWTAPTIPNPEYKGPWKQKKIKNPNYQGKWKAPMIDNPDF--KDDPYIYAFDSLKYIGIELWQVKSGTLFDNF 341
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CALR1_ARATH (Calreticulin-1 OS=Arabidopsis thaliana GN=CRT1 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.584e-23 Identity = 78/236 (33.05%), Postives = 95/236 (40.25%), Query Frame = 1 Query: 13 HHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWD----------------EDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPD---FEPIAAVGIEIWTMQDGILFD 663 H +K +D+LTHVYT +L+PD ILID EKQ + + D P KI DP A KPEDWD +D P EI D DA KPE W AP I NP+ GEWK +NPAYKGKW AP IDNP +K D P+ F + VG+E+W ++ G LFD Sbjct: 158 HLIKKEVPCETDQLTHVYTFVLRPDATYSILIDNVEKQTGSLYSDWDLLP---------------------AKKIKDPSAKKPEDWDDKEYIPDPEDTKPAGYDDIPKEIPDTDAKKPEDW-------------------DDEEDGEWTAPTIPNPEYN-----GEWKPKKIKNPAYKGKWKAPMIDNPEFK----------------DDPELYVFPKLKYVGVELWQVKSGSLFD 332
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CALR_CAEEL (Calreticulin OS=Caenorhabditis elegans GN=crt-1 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.518e-23 Identity = 72/216 (33.33%), Postives = 92/216 (42.59%), Query Frame = 1 Query: 19 LKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDK-PDFEPIAAVGIEIWTMQDGILFD 663 +K + SD+LTH+YT IL DN + IDGE Q + D P KI DPDA KPEDWDE I+D + KPE W KP P P+ GEW+ PM NP YKG+W I NP YKG W +I NP Y D+ +E A+G ++W ++ G +FD Sbjct: 152 IKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGSLEEDWDLLP---------------------AKKIKDPDAKKPEDWDERE--YIDDAEDAKPEDW-------------EKPEHIPD--------PDAKKPEDWDDEMDGEWEPPMIDNPEYKGEWKPKQIKNPAYKGKWIHPEIENPEYTPDDELYSYESWGAIGFDLWQVKSGTIFD 323
BLAST of FC875383 vs. ExPASy Swiss-Prot
Match: CALR_CAEBR (Calreticulin OS=Caenorhabditis briggsae GN=crt-1 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.518e-23 Identity = 73/216 (33.80%), Postives = 93/216 (43.06%), Query Frame = 1 Query: 19 LKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLXXXXXXXXXXXATKPXXXXXXXXXXXXAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKPD-FEPIAAVGIEIWTMQDGILFD 663 +K + SD+LTH+YT IL DN + IDGE Q + D P KI DPDA KPEDWDE I+D + VKPE W KP P P+ GEW+ PM NP YKG+W I NP YKG W +I NP Y D+ +E A+G ++W ++ G +FD Sbjct: 152 IKKEITCKSDELTHLYTLILNADNTYEVKIDGESAQTGSLEEDWDLLP---------------------AKKIKDPDAKKPEDWDERE--YIDDAEDVKPEDW-------------EKPEHIPD--------PDAKKPEDWDDEMDGEWEPPMIDNPEYKGEWKPKQIKNPAYKGKWIHPEIENPEYTPDDELYLYENWGAIGFDLWQVKSGTIFD 323 The following BLAST results are available for this feature:
BLAST of FC875383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875383 ID=FC875383; Name=FC875383; organism=Citrus clementina; type=EST; length=711bpback to top |