FC875400
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_STRU0 (60 kDa chaperonin OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=groL PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13 Identity = 45/126 (35.71%), Postives = 72/126 (57.14%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 DA+ A V +A ++ +LGPKG + +L+ G ITNDG TI ++++++ N AKL+ E++ + GDGTT V+ +++ + K + G +PI I G E A+ AVE L+ IAQ Sbjct: 10 DARAAMVRGVDILADTVKVTLGPKGRNVVLEKAFGSPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPIGIRRGIEKATSAAVEELKAIAQ 135
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_STAHJ (60 kDa chaperonin OS=Staphylococcus haemolyticus (strain JCSC1435) GN=groL PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13 Identity = 42/129 (32.56%), Postives = 76/129 (58.91%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 DA++A + +A ++ ++GPKG + +L ITNDG TI ++++++ N AKL+ E++ + GDGTT V+A +++++ K + G +P+ + EG + A R+AV+ L I+QK E Sbjct: 10 DARQAMLRGVDKLANAVKVTIGPKGRNVVLDKEYVAPLITNDGVTIAKEIELEDPYENMGAKLVQEVANKTNEIAGDGTTTATVLAQAMIQEGLKNVTSGANPVGLREGIDKAVRVAVQALHDISQKVE 138
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_PSYCK (60 kDa chaperonin OS=Psychrobacter cryohalolentis (strain K5) GN=groL PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13 Identity = 39/127 (30.71%), Postives = 75/127 (59.06%), Query Frame = 3 Query: 186 GLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA 554 G+DA+K + +A +R +LGPKG + ++ G TIT DG ++ ++++++N+ A+L+ E++ + GDGTT V+A S+L++ K + G++P+ + G + A R AVE + ++ Sbjct: 8 GIDARKQMMDGVNVLANAVRVTLGPKGRNVVIDKSFGAPTITKDGVSVAKEIELENKFENMGAQLVREVASRTNDVAGDGTTTATVLAQSILQEGMKSVAAGMNPMDLKRGIDKAVRAAVEQIHLLS 134
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_LACPL (60 kDa chaperonin OS=Lactobacillus plantarum GN=groL PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13 Identity = 43/127 (33.86%), Postives = 73/127 (57.48%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 DA+ A + +A ++++LGPKG + +L+ G TITNDG TI + +++D N AKL+ E++ + GDGTT V+ S++ + K + G +P+ I G E A++ AV+ L +A + Sbjct: 10 DARSAMLKGVDQLADTVKSTLGPKGRNVVLEQSYGSPTITNDGVTIAKAIELDDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQSIVNEGMKNVTAGANPVGIRRGIEEATKTAVDSLHAMAHE 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_LACH4 (60 kDa chaperonin OS=Lactobacillus helveticus (strain DPC 4571) GN=groL PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13 Identity = 44/144 (30.56%), Postives = 79/144 (54.86%), Query Frame = 3 Query: 147 ILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 I + +S L+G+D +A ++T++GPKG + +L+ G+ ITNDG TI + +++ +N AKL+ E ++ + GDGTT V+ +++ + K + G +P+ I G E A++ AV+ L +I+ K E Sbjct: 5 IKFSENARRSLLKGVDK----------LADTVKTTIGPKGRNVVLEQSYGNPDITNDGVTIAKSIELKDRYENMGAKLVAEAAQKTNDIAGDGTTTATVLTQAIVREGMKNVTAGANPVGIRRGIEKATKAAVDELHKISHKVE 138
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_BACCN (60 kDa chaperonin OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=groL PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13 Identity = 45/144 (31.25%), Postives = 79/144 (54.86%), Query Frame = 3 Query: 147 ILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 I ++ +S LRG+D +A ++ +LGPKG + +L+ G ITNDG TI ++++++ N AKL+ E++ + GDGTT V+A +++ + K + G +P+ + +G E A AVE L+ I++ E Sbjct: 5 IKFSEEARRSMLRGVDT----------LANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVATAVEELKTISKPIE 138
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_ANOFW (60 kDa chaperonin OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=groL PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13 Identity = 42/129 (32.56%), Postives = 76/129 (58.91%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 +A++A + +A ++ +LGPKG + +L+ G ITNDG TI ++++++ N AKL+ E++ + GDGTT V+A +++ + K + G +P+ I +G E A +AVE L+ I++ E Sbjct: 10 EARRAMLRGVDKLADAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDPFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGIRKGIEKAVAVAVEELKAISKPIE 138
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_STRA5 (60 kDa chaperonin OS=Streptococcus agalactiae serotype V GN=groL PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.236e-13 Identity = 45/126 (35.71%), Postives = 71/126 (56.35%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 DA+ A V +A ++ +LGPKG + +L+ G ITNDG TI ++++++ N AKL+ E++ + GDGTT V+ +++ + K + G +PI I G E A AVE L+ IAQ Sbjct: 10 DARSAMVRGVDILADTVKVTLGPKGRNVVLEKAFGSPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPIGIRRGIETAVSAAVEELKEIAQ 135
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_STRA3 (60 kDa chaperonin OS=Streptococcus agalactiae serotype III GN=groL PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.236e-13 Identity = 45/126 (35.71%), Postives = 71/126 (56.35%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 DA+ A V +A ++ +LGPKG + +L+ G ITNDG TI ++++++ N AKL+ E++ + GDGTT V+ +++ + K + G +PI I G E A AVE L+ IAQ Sbjct: 10 DARSAMVRGVDILADTVKVTLGPKGRNVVLEKAFGSPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPIGIRRGIETAVSAAVEELKEIAQ 135
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_STRA1 (60 kDa chaperonin OS=Streptococcus agalactiae serotype Ia GN=groL PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.236e-13 Identity = 45/126 (35.71%), Postives = 71/126 (56.35%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 DA+ A V +A ++ +LGPKG + +L+ G ITNDG TI ++++++ N AKL+ E++ + GDGTT V+ +++ + K + G +PI I G E A AVE L+ IAQ Sbjct: 10 DARSAMVRGVDILADTVKVTLGPKGRNVVLEKAFGSPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPIGIRRGIETAVSAAVEELKEIAQ 135 The following BLAST results are available for this feature:
BLAST of FC875400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 406
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875400 ID=FC875400; Name=FC875400; organism=Citrus clementina; type=EST; length=723bpback to top |