FC875400
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THS1_HALVO (Thermosome subunit 1 OS=Halobacterium volcanii GN=cct1 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.821e-33 Identity = 72/137 (52.55%), Postives = 96/137 (70.07%), Query Frame = 3 Query: 135 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLE 545 G+P I+L E+ R G DAQ N++AGKAVA +RT+LGPKGMDKML G V +TNDG TIL++MD+D+ A ++VE+S +Q+ E+GDGTT V+ AG LL+QAE LL+ +H IA+GY A+ A E LE Sbjct: 8 GQPMIILG--EDSQRTSGQDAQSMNITAGKAVAEAVRTTLGPKGMDKMLVDSGGQVVVTNDGVTILKEMDIDHPAANMIVEVSETQEDEVGDGTTTAVINAGELLDQAEDLLDSDVHATTIAQGYRQAAEKAKEVLE 142
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THS2_HALVO (Thermosome subunit 2 OS=Halobacterium volcanii GN=cct2 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.685e-33 Identity = 71/144 (49.31%), Postives = 103/144 (71.53%), Query Frame = 3 Query: 135 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 G+P I++ E+ R++ DAQ+ N+ A +AVA +R++LGPKGMDKML GDVTITNDG TIL++MD+DN A+++VE++ +Q+ E GDGTT V +AG LL+ AE LLE+ IHP I G+ +AS A E ++ IA++ + Sbjct: 8 GQPMIIMG--EDAQRVKDRDAQEYNIRAARAVAEAVRSTLGPKGMDKMLVDSMGDVTITNDGVTILKEMDIDNPTAEMIVEVAETQEDEAGDGTTTAVAIAGELLKNAEDLLEQDIHPTAIIRGFNLASEKAREEIDDIAERVD 149
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THSB_THEAC (Thermosome subunit beta OS=Thermoplasma acidophilum GN=thsB PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 4.804e-33 Identity = 69/142 (48.59%), Postives = 99/142 (69.72%), Query Frame = 3 Query: 135 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 G+P +L+ E R G DA K N+ A A++ +R+SLGP+GMDKML GD+ ITNDG TIL++MDV++ AK+MVE+S++QD +GDGTT V++AG LL+QA+ L+ + +HP I+EGY MAS A ++ I+ K Sbjct: 4 GQPIFILK--EGTKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPAAKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTK 143 HSP 2 Score: 25.0238 bits (53), Expect = 4.804e-33 Identity = 14/37 (37.84%), Postives = 23/37 (62.16%), Query Frame = 2 Query: 608 TTLNSKMVNRXQRRLAEDCCQAVLAVADLERKGCHLD 718 T+LNSK + + +LAE +AV +VA+L ++D Sbjct: 158 TSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVD 194
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THSA_SULSO (Thermosome subunit alpha OS=Sulfolobus solfataricus GN=thsA PE=3 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 4.812e-33 Identity = 73/142 (51.41%), Postives = 102/142 (71.83%), Query Frame = 3 Query: 141 PFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 P +LL+ E SR G DA + N+ A K +A +LR+SLGPKG+DKML GDVTITNDGATI++ M++ + AKL+VE +++QD E+GDGTT VV+AG+LLE+AE LL++ IHP I EGY+ A A+E L ++ + + Sbjct: 4 PVLLLK--EGTSRTTGRDALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFGDVTITNDGATIVKDMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGALLEKAESLLDQNIHPTIIIEGYKKAYNKALELLPQLGTRID 143
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THS_METKA (Thermosome subunit OS=Methanopyrus kandleri GN=ths PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.285e-33 Identity = 73/144 (50.69%), Postives = 100/144 (69.44%), Query Frame = 3 Query: 135 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 GR ++L E R G DAQ+ N+ A + VA +RT+LGP GMDKML GDV +TNDG TILE+MD+++ AK++VE++++Q+ E+GDGTT VV+AG LL +AE LL++ IHP IA GY MA A E LE IA++ + Sbjct: 8 GRQVLIL--PEGYQRFVGRDAQRMNIMAARVVAETVRTTLGPMGMDKMLVDEMGDVVVTNDGVTILEEMDIEHPAAKMVVEVAKTQEDEVGDGTTTAVVLAGELLHKAEDLLQQDIHPTVIARGYRMAVEKAEEILEEIAEEID 149
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THSB_THEK1 (Thermosome subunit beta OS=Thermococcus sp. (strain KS-1) GN=thsB PE=3 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 6.285e-33 Identity = 72/141 (51.06%), Postives = 101/141 (71.63%), Query Frame = 3 Query: 135 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 G+P ++L E R G DAQ+ N+ A + +A +RT+LGPKGMDKML GD+ ITNDGATIL++MD+ + AK+MVE++++QD E GDGTT VV+AG LL +AE+LL++ IHP I +GY +A+ A E L+ IA+ Sbjct: 6 GQPVVIL--PEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDEIAK 144
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THSB_PYRKO (Thermosome subunit beta OS=Pyrococcus kodakaraensis GN=thsB PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.285e-33 Identity = 72/141 (51.06%), Postives = 101/141 (71.63%), Query Frame = 3 Query: 135 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 G+P ++L E R G DAQ+ N+ A + +A +RT+LGPKGMDKML GD+ ITNDGATIL++MD+ + AK+MVE++++QD E GDGTT VV+AG LL +AE+LL++ IHP I +GY +A+ A E L+ IA+ Sbjct: 6 GQPVVIL--PEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDEIAK 144
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THSB_ARCFU (Thermosome subunit beta OS=Archaeoglobus fulgidus GN=thsB PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.285e-33 Identity = 71/140 (50.71%), Postives = 102/140 (72.86%), Query Frame = 3 Query: 135 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA 554 G+P ++LR E R G DAQ+ N+ A + +A +R++LGPKGMDKML GDV ITNDG TIL+++DV++ AK+++E++++QD E+GDGTT VV+AG LL++AE+LL++ IHP IA GY A+ A+E L IA Sbjct: 6 GQPVLILR--EGTQRTVGRDAQRMNIMAARVIAEAVRSTLGPKGMDKMLVDSLGDVVITNDGVTILKEIDVEHPAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKRAEELLDQEIHPAIIANGYRYAAEKALEILNEIA 143
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THSA_SULSH (Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.285e-33 Identity = 73/142 (51.41%), Postives = 102/142 (71.83%), Query Frame = 3 Query: 141 PFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 P +LL+ E SR G DA + N+ A K +A +LR+SLGPKG+DKML GDVTITNDGATI++ M++ + AKL+VE +++QD E+GDGTT VV+AG+LLE+AE LL++ IHP I EGY+ A A+E L ++ + + Sbjct: 4 PVLLLK--EGTSRTTGRDALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFGDVTITNDGATIVKDMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGALLEKAESLLDQNIHPTIIIEGYKKAYTKALELLPQLGTRID 143
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPD_TAKRU (T-complex protein 1 subunit delta OS=Takifugu rubripes GN=cct4 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.285e-33 Identity = 72/123 (58.54%), Postives = 93/123 (75.61%), Query Frame = 3 Query: 204 ANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFG 572 +N+SA KAVA +RTSLGPKGMDKM+Q GDVTITNDGATIL+QM V + AK++VELS++QD E GDGTT VVV+AG+LL+ +LL+RGIHP I+E ++ A VE L ++Q + G Sbjct: 33 SNISAAKAVADAVRTSLGPKGMDKMIQDEKGDVTITNDGATILKQMQVLHPSAKMLVELSKAQDIEAGDGTTSVVVIAGALLDSCNRLLQRGIHPTIISESFQKAVDKGVEVLTAMSQPVQLG 155 The following BLAST results are available for this feature:
BLAST of FC875400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 406
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875400 ID=FC875400; Name=FC875400; organism=Citrus clementina; type=EST; length=723bpback to top |