FC875400
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_STAA1 (60 kDa chaperonin OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=groL PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.102e-12 Identity = 40/129 (31.01%), Postives = 75/129 (58.14%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 DA++A + +A ++ ++GPKG + +L ITNDG TI ++++++ N AKL+ E++ + GDGTT V+A +++++ K + G +P+ + +G + A ++AVE L +QK E Sbjct: 10 DARQAMLRGVDQLANAVKVTIGPKGRNVVLDKEFTAPLITNDGVTIAKEIELEDPYENMGAKLVQEVANKTNEIAGDGTTTATVLAQAMIQEGLKNVTSGANPVGLRQGIDKAVKVAVEALHENSQKVE 138
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_LACS1 (60 kDa chaperonin OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=groL PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.102e-12 Identity = 40/129 (31.01%), Postives = 72/129 (55.81%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 DA+ + +A +++++GPKG + +L+ G TITNDG TI + D++ N AKL+ E++ + GDGTT V+ +++ + K + G +P+ I G E+A++ AV+ L ++ E Sbjct: 10 DARSKMLKGVDKLANTVKSTIGPKGRNVVLEQSYGSPTITNDGVTIAKATDLEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVNEGMKNVTAGANPVGIRRGIELATKAAVDALHEMSHTVE 138
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_DICTD (60 kDa chaperonin OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=groL PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.102e-12 Identity = 43/130 (33.08%), Postives = 73/130 (56.15%), Query Frame = 3 Query: 189 LDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 + A+ A + VA ++ +LGPKG + +L+ G ITNDG TI +++D+ +N A+L+ E++ + GDGTT V+A +L+ + K + G +P+ + G E A VE L++IA+ E Sbjct: 10 MQARTALIKGLDTVADTVKITLGPKGRNVVLEKKFGAPVITNDGVTIAKEIDLEDPFENMGAQLVKEVASKTNDVAGDGTTTATVLAQALVHEGMKHVVAGANPMYVKRGIEKAVEKVVEELKKIAKPVE 139
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_BORT9 (60 kDa chaperonin OS=Borrelia turicatae (strain 91E135) GN=groL PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.102e-12 Identity = 39/127 (30.71%), Postives = 75/127 (59.06%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 DA+K+ +S + ++ ++ +LGPKG + ++ G T+T DG ++ ++++DN + A+L+ E++ + GDGTT V+A ++ + K + GI+PI I +G E A +A E + + A+K Sbjct: 10 DARKSLLSGIEKLSNAVKVTLGPKGRNVLIDKKFGSPTVTKDGVSVAREIELDNALENMGAQLLKEVAIKTNDLAGDGTTTATVLAYAIAREGLKNVSSGINPIGIKKGIEHAVTLASEKIRKSAKK 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_THEAB (60 kDa chaperonin OS=Thermosipho africanus (strain TCF52B) GN=groL PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.745e-12 Identity = 39/127 (30.71%), Postives = 77/127 (60.63%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 +A++A AVA ++ +LGPKG + +++ G TITNDG +I ++++++++ A+L+ E++ + GDGTT V+A +++++ K + G +PI + G E A VE +++I++K Sbjct: 10 EARRALERGVDAVADAVKITLGPKGRNVVIEKSWGSPTITNDGVSIAKEIELEDKFENLGAQLVKEVASKTNDVAGDGTTTATVLAQAMIKEGIKNVTAGANPILVKRGIEKAVAAGVEEIKKISKK 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_STRMU (60 kDa chaperonin OS=Streptococcus mutans GN=groL PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.745e-12 Identity = 43/126 (34.13%), Postives = 71/126 (56.35%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 DA+ + V +A ++ +LGPKG + +L+ G ITNDG TI ++++++ N AKL+ E++ + GDGTT V+ +++ + K + G +PI I G E A AV+ L+ IAQ Sbjct: 10 DARSSMVRGVDILADTVKVTLGPKGRNVVLEKSFGSPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPIGIRRGIETAVATAVDELKAIAQ 135
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_ONYPE (60 kDa chaperonin OS=Onion yellows phytoplasma GN=groL PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.745e-12 Identity = 40/136 (29.41%), Postives = 76/136 (55.88%), Query Frame = 3 Query: 171 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 K L G +A+KA + A+A ++ +LGPKG + +L+ I NDG +I +++++ N AKL+ E++ + + GDGTT V+A S++ + ++ G +P+ + EG E+A+ + L ++K + Sbjct: 3 KKILYGKEARKALLQGVDAIANTVKVTLGPKGRNVILEKAYDSPAIVNDGVSIAKEIELKNPYQNMGAKLVYEVASKTNDKAGDGTTTATVLAQSMIHRGFDAIDAGANPVLVKEGIELAALTVAKKLLAKSKKVD 138
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_GARVA (60 kDa chaperonin OS=Gardnerella vaginalis GN=groL PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.745e-12 Identity = 43/129 (33.33%), Postives = 73/129 (56.59%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 DA++ ++ +A ++ +LGPKG + +L G TITNDG +I +++D+++ A+L+ E+++ D GDGTT V+A SL+ + K + G +PI + G E AS V+ L A+ E Sbjct: 10 DARQGMLAGLDRLANTVKVTLGPKGRNVVLDKSYGAPTITNDGVSIAKEIDLEDPYERIGAELVKEVAKKTDDVAGDGTTTATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVE 138
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH604_BRAJA (60 kDa chaperonin 4 OS=Bradyrhizobium japonicum GN=groL4 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.745e-12 Identity = 40/132 (30.30%), Postives = 73/132 (55.30%), Query Frame = 3 Query: 171 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA 554 K L ++A++A + +A + ++LGPKGM+ M+ P G ++ DG TI ++++ +N A+++ E+S + GDGTT +V+A L++ LERG + + +G + A + VE L+ A Sbjct: 3 KVLLHDIEARRALARGVQKLAAAIESTLGPKGMNAMVDRPIGTPIVSRDGVTIASEIELPDRFENMGAQVVREVSMQTNEVAGDGTTTAMVLANGLIQGGVAALERGAKAVDLCKGIDRAVEVVVESLKSAA 134
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_SACD2 (60 kDa chaperonin OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=groL PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.586e-12 Identity = 38/133 (28.57%), Postives = 77/133 (57.89%), Query Frame = 3 Query: 186 GLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFG 572 G +A++ ++ +A ++T+LGPKG + +L G T+T DG ++ +++++ +N A+++ E++ + GDGTT V+A +++ + K + G++P+ + G + A AV H++ IAQ E G Sbjct: 8 GDEARQKMLAGVNVLADAVKTTLGPKGRNVVLDKSFGAPTVTKDGVSVAKEIELEDKFENMGAQMVKEVASKASDDAGDGTTTATVLAQAIVNEGLKSVAAGMNPMDLKRGIDKAVNAAVAHIKSIAQPCEDG 140 The following BLAST results are available for this feature:
BLAST of FC875400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 406
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875400 ID=FC875400; Name=FC875400; organism=Citrus clementina; type=EST; length=723bpback to top |