FC875400
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_LACBA (60 kDa chaperonin OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=groL PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.586e-12 Identity = 40/125 (32.00%), Postives = 73/125 (58.40%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA 554 DA+ ++ +A ++T+LGPKG + +L+ G+ TITNDG TI + +++ +N AKL+ E++ + GDGTT V+ +++ + K + G +P+ I G E A+ AV+ L +++ Sbjct: 10 DARSKMLAGVDKLANTVKTTLGPKGRNVVLEQSYGNPTITNDGVTIAKAIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVNEGMKNVTAGANPVGIRRGIEKATGAAVDALHKMS 134
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH601_GLOVI (60 kDa chaperonin 1 OS=Gloeobacter violaceus GN=groL1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.586e-12 Identity = 40/118 (33.90%), Postives = 70/118 (59.32%), Query Frame = 3 Query: 225 AVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 A+A +R +LGPKG + +L+ G I NDG TI ++++++N++ A+L+ E++ + GDGTT V+A SL+++ K + G +P+ + G E R V LE++A+ E Sbjct: 21 ALANAVRVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELENKLENTGAQLIKEVASKTNDVAGDGTTTACVLAQSLVKEGLKNVAAGSNPMNLKRGMEKTVRHLVAELEKVAKPVE 138
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_THETN (60 kDa chaperonin OS=Thermoanaerobacter tengcongensis GN=groL PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.683e-12 Identity = 43/131 (32.82%), Postives = 72/131 (54.96%), Query Frame = 3 Query: 186 GLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 G +A+KA AVA ++ +LGP+G + +L G T+TNDG TI ++++ +NQ A+L+ E + + GDGTT ++A ++ + K L G +P+ + G A AVE L RI++ + Sbjct: 8 GEEARKALERGVNAVANTVKVTLGPRGRNVVLDKKYGTPTVTNDGVTIAREIELEDPFENQGAQLLKEAATKTNDVAGDGTTTATLLAQVMVLEGLKNLAAGANPMLLRRGMAKAVEAAVEGLRRISKPID 138
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_THEBR (60 kDa chaperonin OS=Thermoanaerobacter brockii GN=groL PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.683e-12 Identity = 42/131 (32.06%), Postives = 74/131 (56.49%), Query Frame = 3 Query: 186 GLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 G +A++A AVA ++ +LGP+G + +L G T+TNDG TI ++++ +NQ A+L+ E + + GDGTT ++A +++ + K L G +P+ + G A AVE L+RI++ + Sbjct: 8 GEEARRALERGVNAVADTVKVTLGPRGRNVVLDKKYGSPTVTNDGVTIAREIELEDPFENQGAQLLKEAATKTNDIAGDGTTTATLLAQAMVREGLKNLAAGANPMLLRRGIAKAVDAAVEGLKRISKPID 138
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_HELMI (60 kDa chaperonin OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=groL PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.683e-12 Identity = 40/129 (31.01%), Postives = 73/129 (56.59%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 +A++A +A +R +LGPKG + +L+ G ITNDG TI ++++++N I A+L+ E++ + GDGTT ++A +++ + K + G +P+ + G E A AV ++ IA+ E Sbjct: 10 EARRALEKGVNTLAEAVRVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELENPIENMGAQLVKEVATKTNDVAGDGTTTATILAQAIIREGMKNVAAGANPMVLKRGIEKAVEKAVAEIKAIAKPVE 138
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_FUSNN (60 kDa chaperonin OS=Fusobacterium nucleatum subsp. nucleatum GN=groL PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.683e-12 Identity = 41/129 (31.78%), Postives = 77/129 (59.69%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 +A+K +A ++ +LGP+G + +L+ G ITNDG TI ++++++ N A L+ E++ + GDGTT ++A +++++ K+L G +PI + +G E+A++ AVE L+ A+K E Sbjct: 10 EARKKLEIGVNTLADAVKVTLGPRGRNVVLEKSYGAPLITNDGVTIAKEIELEDPFENMGAALVKEVAIKSNDVAGDGTTTATILAQAIVKEGLKMLSAGANPIFLKKGIELAAKEAVEVLKDKAKKIE 138
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_EXISA (60 kDa chaperonin OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=groL PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.683e-12 Identity = 39/129 (30.23%), Postives = 76/129 (58.91%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 DA+ A + A+A ++ ++GPKG + +L+ G ITNDG TI ++++++++ AKL+ E++ + GDGTT V+A +++ + K + G +P+ + +G + A A+E L+ I++ E Sbjct: 10 DARHAMLRGVDALADAVKVTIGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDRFENMGAKLVAEVASKTNEVAGDGTTTATVLAQAMIREGLKNVTAGANPMILRKGIDKAVTRALEELKAISKPIE 138
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_EUBR3 (60 kDa chaperonin OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=groL PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.683e-12 Identity = 43/129 (33.33%), Postives = 75/129 (58.14%), Query Frame = 3 Query: 186 GLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 G +A+ A + +A +R +LGPKG + +L G ITNDG TI ++++++ N A+L+ E++ + GDGTT V+ +++++ K LE G +PI + G + A+ AVE L+ ++QK Sbjct: 8 GSEARAALGAGVDKLANTVRVTLGPKGRNVVLDKSYGAPLITNDGVTIAKEVELEDAFENMGAQLVKEVATKTNDVAGDGTTTATVLTQAMVQEGMKNLEAGANPIVLRRGMKKATDKAVEALKDMSQK 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_EUBE2 (60 kDa chaperonin OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=groL PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.683e-12 Identity = 41/129 (31.78%), Postives = 74/129 (57.36%), Query Frame = 3 Query: 186 GLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 G++A+KA +A +R ++GPKG + +L G ITNDG TI + +++ +N A+L+ E++ + GDGTT V+A +++ + K L G +PI + +G + A+ AVE + +++K Sbjct: 8 GIEARKALEEGVNKLANTVRVTIGPKGRNVVLDKSYGAPLITNDGVTIAKDIELEDAFENMGAQLVKEVAAKTNDVAGDGTTTATVLAQAMINEGMKNLAAGANPIVLRKGMKKATDCAVEAIAGMSEK 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_BIFLO (60 kDa chaperonin OS=Bifidobacterium longum GN=groL PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.683e-12 Identity = 41/129 (31.78%), Postives = 73/129 (56.59%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 +A++ + +A ++ +LGPKG + +L G TITNDG +I +++D+++ A+L+ E+++ D GDGTT V+A SL+ + K + G +PI + G E A+ + V+ L A+ E Sbjct: 10 EARQGMLEGLDKLANTVKVTLGPKGRNVVLDKTYGAPTITNDGVSIAKEIDLEDPYERIGAELVKEVAKKTDDVAGDGTTTATVLAQSLVHEGLKNVVAGSNPIALRRGIEKATEVIVKELVAAAKDVE 138 The following BLAST results are available for this feature:
BLAST of FC875400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 406
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875400 ID=FC875400; Name=FC875400; organism=Citrus clementina; type=EST; length=723bpback to top |