FC875400
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_LACLM (60 kDa chaperonin OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=groL PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.988e-12 Identity = 40/125 (32.00%), Postives = 72/125 (57.60%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA 554 DA+ A + +A ++T+LGPKG + +L+ G ITNDG TI +++++ +N AKL+ E++ + GDGTT V+ +++ + K + G +P+ I G E+A+ AV ++ +A Sbjct: 10 DARTAMMRGIDILADTVKTTLGPKGRNVVLEKSYGSPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPVGIRRGIELAAETAVASIKEMA 134
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_LACLA (60 kDa chaperonin OS=Lactococcus lactis subsp. lactis GN=groL PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.988e-12 Identity = 40/125 (32.00%), Postives = 72/125 (57.60%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA 554 DA+ A + +A ++T+LGPKG + +L+ G ITNDG TI +++++ +N AKL+ E++ + GDGTT V+ +++ + K + G +P+ I G E+A+ AV ++ +A Sbjct: 10 DARTAMMRGIDILADTVKTTLGPKGRNVVLEKSYGSPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPVGIRRGIELAAETAVASIKEMA 134
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_BORGA (60 kDa chaperonin OS=Borrelia garinii GN=groL PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.988e-12 Identity = 37/127 (29.13%), Postives = 74/127 (58.27%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 DA+K+ +S + ++ ++ +LGPKG + ++ G T+T DG ++ +++++N A+L+ E++ + GDGTT V+A ++ + K + GI+PI I +G + A +A E + + A+K Sbjct: 10 DARKSLLSGVEKLSNAVKVTLGPKGRNVLIDKKFGSPTVTKDGVSVAREIELENPFENMGAQLLKEVAIKTNDVAGDGTTTATVLAYAIAREGLKNVSSGINPIGIKKGIDHAVNLAAEKIRQSAKK 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_BORBZ (60 kDa chaperonin OS=Borrelia burgdorferi (strain ZS7) GN=groL PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.988e-12 Identity = 37/127 (29.13%), Postives = 74/127 (58.27%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 DA+K+ +S + ++ ++ +LGPKG + ++ G T+T DG ++ +++++N A+L+ E++ + GDGTT V+A ++ + K + GI+PI I +G + A +A E + + A+K Sbjct: 10 DARKSLLSGVEKLSNAVKVTLGPKGRNVLIDKKFGSPTVTKDGVSVAREIELENPFENMGAQLLKEVAIKTNDVAGDGTTTATVLAYAIAREGLKNVSSGINPIGIKKGIDHAVNLAAEKIRQSAKK 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_BORBU (60 kDa chaperonin OS=Borrelia burgdorferi GN=groL PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.988e-12 Identity = 37/127 (29.13%), Postives = 74/127 (58.27%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 DA+K+ +S + ++ ++ +LGPKG + ++ G T+T DG ++ +++++N A+L+ E++ + GDGTT V+A ++ + K + GI+PI I +G + A +A E + + A+K Sbjct: 10 DARKSLLSGVEKLSNAVKVTLGPKGRNVLIDKKFGSPTVTKDGVSVAREIELENPFENMGAQLLKEVAIKTNDVAGDGTTTATVLAYAIAREGLKNVSSGINPIGIKKGIDHAVNLAAEKIRQSAKK 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_BIFAA (60 kDa chaperonin OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=groL PE=3 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 7.988e-12 Identity = 42/129 (32.56%), Postives = 73/129 (56.59%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 +A++ ++ +A ++ +LGPKG + +L G TITNDG +I +++D+D+ A+L+ E+++ D GDGTT V+A SL+ + K + G +PI + G E A+ V+ L A+ E Sbjct: 10 EARQGMLAGLDKLADTVKVTLGPKGRNVVLDKTYGAPTITNDGVSIAKEIDLDDPYERIGAELVKEVAKKTDDVAGDGTTTATVLAQSLVHEGLKNVTAGSNPIALRRGIEKAADAIVKELVAAAKDVE 138
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_TSUTY (60 kDa chaperonin OS=Tsukamurella tyrosinosolvens GN=groL PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.043e-11 Identity = 38/118 (32.20%), Postives = 70/118 (59.32%), Query Frame = 3 Query: 225 AVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 A+A ++ +LGPKG + +L+ G TITNDG +I +++++++ A+L+ E+++ D GDGTT V+A +L+ + + + G +P+ + G E A EHL + A++ E Sbjct: 21 ALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEAVTEHLLKAAKEVE 138
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_PARDN (60 kDa chaperonin OS=Parascardovia denticolens GN=groL PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.043e-11 Identity = 41/129 (31.78%), Postives = 74/129 (57.36%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 566 +A++ + +A ++ +LGPKG + +L G TITNDG +I +++D+++ A+L+ E+++ D GDGTT V+A +L+ + K + G +PI + G E AS+ V++L A+ E Sbjct: 10 EARQGMLEGLDELANTVKVTLGPKGRNVVLDKSYGAPTITNDGVSIAKEIDLEDPYQRIGAELVKEVAKKTDDVAGDGTTTATVLAQALVHEGLKNVTSGSNPIALRRGIEKASQTIVKNLLENAKPVE 138
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_MACCJ (60 kDa chaperonin OS=Macrococcus caseolyticus (strain JCSC5402) GN=groL PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.043e-11 Identity = 39/126 (30.95%), Postives = 74/126 (58.73%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 DA++A ++ +A ++ +LGPKG + +L ITNDG TI ++++++ N AKL+ E++ + GDGTT V+A +++++ K + G +P+ I +G + A +A+E L I++ Sbjct: 10 DARRAMLAGVDKLADAVKVTLGPKGRNVVLDKKFVAPLITNDGVTIAKEIELEDPYENMGAKLVAEVANKTNEIAGDGTTTATVLAQAMIQEGLKNVTSGANPVGIRQGIDKAVAVALEELAAISK 135
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_BORAP (60 kDa chaperonin OS=Borrelia afzelii (strain PKo) GN=groL PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.043e-11 Identity = 37/127 (29.13%), Postives = 74/127 (58.27%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 DA+K+ +S + ++ ++ +LGPKG + ++ G T+T DG ++ +++++N A+L+ E++ + GDGTT V+A ++ + K + GI+PI I +G + A +A E + + A+K Sbjct: 10 DARKSLLSGVEKLSNAVKVTLGPKGRNVLIDKKFGSPTVTKDGVSVAREIELENPFENMGAQLLKEVAIKTNDVAGDGTTTATVLAYAIAREGLKNVSSGINPIGIKKGIDHAVSLAAEKIRQSAKK 136 The following BLAST results are available for this feature:
BLAST of FC875400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 406
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875400 ID=FC875400; Name=FC875400; organism=Citrus clementina; type=EST; length=723bpback to top |