FC875400
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_XANOP (60 kDa chaperonin OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=groL PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.780e-11 Identity = 37/128 (28.91%), Postives = 73/128 (57.03%), Query Frame = 3 Query: 186 GLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 G DA+ V +A ++ +LGPKG + +L+ G TIT DG ++ +++++ +N A+++ E++ + GDGTT V+A +L+ + K + G++P+ + G + A + AV L+ I++ Sbjct: 9 GEDARTRMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEIELADKFENMGAQMVKEVASKTNDNAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRGIDQAVKAAVVELKNISK 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_XANOM (60 kDa chaperonin OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=groL PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.780e-11 Identity = 37/128 (28.91%), Postives = 73/128 (57.03%), Query Frame = 3 Query: 186 GLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 G DA+ V +A ++ +LGPKG + +L+ G TIT DG ++ +++++ +N A+++ E++ + GDGTT V+A +L+ + K + G++P+ + G + A + AV L+ I++ Sbjct: 9 GEDARTRMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEIELADKFENMGAQMVKEVASKTNDNAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRGIDQAVKAAVVELKNISK 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_XANCH (60 kDa chaperonin OS=Xanthomonas campestris pv. phaseoli GN=groL PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.780e-11 Identity = 37/128 (28.91%), Postives = 73/128 (57.03%), Query Frame = 3 Query: 186 GLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 G DA+ V +A ++ +LGPKG + +L+ G TIT DG ++ +++++ +N A+++ E++ + GDGTT V+A +L+ + K + G++P+ + G + A + AV L+ I++ Sbjct: 9 GEDARTRMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEIELADKFENMGAQMVKEVASKTNDNAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRGIDQAVKAAVVELKNISK 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_XANC5 (60 kDa chaperonin OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=groL PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.780e-11 Identity = 37/128 (28.91%), Postives = 73/128 (57.03%), Query Frame = 3 Query: 186 GLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 G DA+ V +A ++ +LGPKG + +L+ G TIT DG ++ +++++ +N A+++ E++ + GDGTT V+A +L+ + K + G++P+ + G + A + AV L+ I++ Sbjct: 9 GEDARTRMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEIELADKFENMGAQMVKEVASKTNDNAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRGIDQAVKAAVVELKNISK 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_XANAC (60 kDa chaperonin OS=Xanthomonas axonopodis pv. citri GN=groL PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.780e-11 Identity = 37/128 (28.91%), Postives = 73/128 (57.03%), Query Frame = 3 Query: 186 GLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 G DA+ V +A ++ +LGPKG + +L+ G TIT DG ++ +++++ +N A+++ E++ + GDGTT V+A +L+ + K + G++P+ + G + A + AV L+ I++ Sbjct: 9 GEDARTRMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEIELADKFENMGAQMVKEVASKTNDNAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRGIDQAVKAAVVELKNISK 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_THET8 (60 kDa chaperonin OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=groL PE=1 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 1.780e-11 Identity = 37/124 (29.84%), Postives = 72/124 (58.06%), Query Frame = 3 Query: 195 AQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA 554 A++A AVA ++ +LGP+G + +L+ G TIT DG T+ +++++++ + A+L+ E++ + GDGTT V+A +++ + K + G +P+ + G E A AVE ++ +A Sbjct: 11 ARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALA 134
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_THET2 (60 kDa chaperonin OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=groL PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.780e-11 Identity = 37/124 (29.84%), Postives = 72/124 (58.06%), Query Frame = 3 Query: 195 AQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA 554 A++A AVA ++ +LGP+G + +L+ G TIT DG T+ +++++++ + A+L+ E++ + GDGTT V+A +++ + K + G +P+ + G E A AVE ++ +A Sbjct: 11 ARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALA 134
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_STRZT (60 kDa chaperonin OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=groL PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.780e-11 Identity = 43/125 (34.40%), Postives = 69/125 (55.20%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA 554 DA+ A V +A ++ +LGPKG + +L+ G ITNDG TI +++++ +N AKL+ E++ + GDGTT V+ +++ + K + G +PI I G E A AVE L+ A Sbjct: 10 DARSAMVRGVDILADTVKVTLGPKGRNVVLEKSFGSPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGIKNVTAGANPIGIRRGIETAVAAAVEALKNNA 134
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_STRZP (60 kDa chaperonin OS=Streptococcus pneumoniae (strain P1031) GN=groL PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.780e-11 Identity = 43/125 (34.40%), Postives = 69/125 (55.20%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA 554 DA+ A V +A ++ +LGPKG + +L+ G ITNDG TI +++++ +N AKL+ E++ + GDGTT V+ +++ + K + G +PI I G E A AVE L+ A Sbjct: 10 DARSAMVRGVDILADTVKVTLGPKGRNVVLEKSFGSPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGIKNVTAGANPIGIRRGIETAVAAAVEALKNNA 134
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH60_STRZJ (60 kDa chaperonin OS=Streptococcus pneumoniae (strain JJA) GN=groL PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.780e-11 Identity = 43/125 (34.40%), Postives = 69/125 (55.20%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA 554 DA+ A V +A ++ +LGPKG + +L+ G ITNDG TI +++++ +N AKL+ E++ + GDGTT V+ +++ + K + G +PI I G E A AVE L+ A Sbjct: 10 DARSAMVRGVDILADTVKVTLGPKGRNVVLEKSFGSPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGIKNVTAGANPIGIRRGIETAVAAAVEALKNNA 134 The following BLAST results are available for this feature:
BLAST of FC875400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 406
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875400 ID=FC875400; Name=FC875400; organism=Citrus clementina; type=EST; length=723bpback to top |