FC875400
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH601_MYXXD (60 kDa chaperonin 1 OS=Myxococcus xanthus (strain DK 1622) GN=groL1 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.832e-11 Identity = 38/126 (30.16%), Postives = 72/126 (57.14%), Query Frame = 3 Query: 213 SAGKAVARILRT-------SLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 SA +A+ R +RT +LGPKG + +++ G TIT DG T+ +++D++N+ A+++ E++ + GDGTT V+A ++ E+ KL+ G P+ + G + A + V L+ +++ Sbjct: 11 SAREAILRGVRTLSDAVAVTLGPKGRNVVIEKSFGSPTITKDGVTVAKEIDLENKFENMGAQMVKEVASKTSDKAGDGTTTATVLARAIYEEGLKLVAAGHSPMDLKRGIDKAVEVVVGELKSLSK 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH601_BURTA (60 kDa chaperonin 1 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=groL1 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.832e-11 Identity = 35/127 (27.56%), Postives = 75/127 (59.06%), Query Frame = 3 Query: 192 DAQKANVSAG-KAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 D+ +A + G +A ++ +LGPKG + +L+ G T+T DG ++ +++++ +++ A+++ E++ GDGTT V+A S++ + K + G++P+ + G + A AVE L++I++ Sbjct: 10 DSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVAAAVEELKKISK 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH601_BURPS (60 kDa chaperonin 1 OS=Burkholderia pseudomallei GN=groL1 PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.832e-11 Identity = 35/127 (27.56%), Postives = 75/127 (59.06%), Query Frame = 3 Query: 192 DAQKANVSAG-KAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 D+ +A + G +A ++ +LGPKG + +L+ G T+T DG ++ +++++ +++ A+++ E++ GDGTT V+A S++ + K + G++P+ + G + A AVE L++I++ Sbjct: 10 DSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVAAAVEELKKISK 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH601_BURP6 (60 kDa chaperonin 1 OS=Burkholderia pseudomallei (strain 668) GN=groL1 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.832e-11 Identity = 35/127 (27.56%), Postives = 75/127 (59.06%), Query Frame = 3 Query: 192 DAQKANVSAG-KAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 D+ +A + G +A ++ +LGPKG + +L+ G T+T DG ++ +++++ +++ A+++ E++ GDGTT V+A S++ + K + G++P+ + G + A AVE L++I++ Sbjct: 10 DSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVAAAVEELKKISK 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH601_BURP1 (60 kDa chaperonin 1 OS=Burkholderia pseudomallei (strain 1710b) GN=groL1 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.832e-11 Identity = 35/127 (27.56%), Postives = 75/127 (59.06%), Query Frame = 3 Query: 192 DAQKANVSAG-KAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 D+ +A + G +A ++ +LGPKG + +L+ G T+T DG ++ +++++ +++ A+++ E++ GDGTT V+A S++ + K + G++P+ + G + A AVE L++I++ Sbjct: 10 DSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVAAAVEELKKISK 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: CH601_BURP0 (60 kDa chaperonin 1 OS=Burkholderia pseudomallei (strain 1106a) GN=groL1 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.832e-11 Identity = 35/127 (27.56%), Postives = 75/127 (59.06%), Query Frame = 3 Query: 192 DAQKANVSAG-KAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQ 557 D+ +A + G +A ++ +LGPKG + +L+ G T+T DG ++ +++++ +++ A+++ E++ GDGTT V+A S++ + K + G++P+ + G + A AVE L++I++ Sbjct: 10 DSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVAAAVEELKKISK 136 The following BLAST results are available for this feature:
BLAST of FC875400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 406
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875400 ID=FC875400; Name=FC875400; organism=Citrus clementina; type=EST; length=723bpback to top |