FC875400
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPD_YEAST (T-complex protein 1 subunit delta OS=Saccharomyces cerevisiae GN=CCT4 PE=1 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.602e-28 Identity = 60/130 (46.15%), Postives = 97/130 (74.62%), Query Frame = 3 Query: 171 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 K++ + + +KAN+ A ++VA +RTSLGPKGMDKM+++ G++ I+NDG TIL+QM + + +A+++VE+S +QD E GDGTT VV++ G+LL AE+LL +GIHP IA+ ++ A++ +V+ L + K Sbjct: 12 KNKEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVARMLVEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHK 141
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPA_TETPY (T-complex protein 1 subunit alpha OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.951e-28 Identity = 60/123 (48.78%), Postives = 92/123 (74.80%), Query Frame = 3 Query: 177 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLE 545 R +G D + NV+A A+A I+++SLGP+G+DKML GDVTITNDGATIL Q++V + AK++VELS+ QD E+GDGTT VV++A LL++A +L++ +HP I G+++A++ A +++ Sbjct: 11 RDQGQDVRTNNVTAVMAIANIVKSSLGPQGLDKMLVDDVGDVTITNDGATILRQLEVQHPAAKVIVELSQLQDKEVGDGTTSVVILAAELLKRANELIKNKVHPTSIITGFKIAAKEACTYIK 133
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPD_DEBHA (T-complex protein 1 subunit delta OS=Debaryomyces hansenii GN=CCT4 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.038e-27 Identity = 59/123 (47.97%), Postives = 91/123 (73.98%), Query Frame = 3 Query: 192 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 + +K+N+ A +AV+ +RTSLGPKGMDKM+++ +G++ I+NDGATIL+ M V + A+++V++S +QD E GDGTT V ++ GSLL AEKLL +GIHP I+E ++ A+ + E L ++ K Sbjct: 24 EVRKSNILAARAVSDAIRTSLGPKGMDKMIKTKNGEIIISNDGATILKHMAVLHPAARMLVDVSAAQDVEAGDGTTSVAILTGSLLGAAEKLLNKGIHPTLISESFQRAATRSAEVLLEMSHK 146
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPA_ARATH (T-complex protein 1 subunit alpha OS=Arabidopsis thaliana GN=CCT1 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.038e-27 Identity = 62/123 (50.41%), Postives = 86/123 (69.92%), Query Frame = 3 Query: 177 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLE 545 R G D + NV A +AV+ I++TSLGP G+DKML GDVTITNDGATIL ++V++ AK++VEL+ QD E+GDGTT VV++A LL++A L+ IHP I GY +A R + +++E Sbjct: 14 RQSGQDVRTQNVMACQAVSNIVKTSLGPVGLDKMLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMRESCKYIE 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPA_SCHMA (T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.356e-27 Identity = 59/123 (47.97%), Postives = 88/123 (71.54%), Query Frame = 3 Query: 177 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLE 545 R G +K NV A + A ++TSLGP G+DKML GDVTITNDGATIL+ +DV++ AK++V+L++ QD E+GDGTT VV++A +LL+ A++L+ R +HP + GY +A R A ++++ Sbjct: 8 RTSGESVRKQNVLAACSFANFVKTSLGPVGLDKMLVDDVGDVTITNDGATILKLLDVEHPAAKILVQLAQLQDEEVGDGTTSVVILAAALLKNADELISRFVHPTTVINGYRLACREACKYIQ 130
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPA_SCHPO (T-complex protein 1 subunit alpha OS=Schizosaccharomyces pombe GN=cct1 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.021e-27 Identity = 59/122 (48.36%), Postives = 86/122 (70.49%), Query Frame = 3 Query: 177 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHL 542 ++ G D + NV A A+A ++++SLGP G+DKML GDVT+TNDGATIL +DV++ K++VEL++ QD E+GDGTT VV++A LL +A +L++ IHP I GY +A R AV+ + Sbjct: 16 KISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEHPAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAVKFM 137
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPA_CAEEL (T-complex protein 1 subunit alpha OS=Caenorhabditis elegans GN=cct-1 PE=2 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 3.946e-27 Identity = 57/122 (46.72%), Postives = 90/122 (73.77%), Query Frame = 3 Query: 177 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHL 542 R G + NV+A A+A I+++SLGP G+DKML GDV +TNDGATIL+Q++V++ K++VEL++ QD E+GDGTT VV++A LL++A++L+++ +HP I GY +A + AV+++ Sbjct: 15 RTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYI 136
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THSG_SULSO (Thermosome subunit gamma OS=Sulfolobus solfataricus GN=thsC PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.154e-27 Identity = 67/137 (48.91%), Postives = 94/137 (68.61%), Query Frame = 3 Query: 150 LLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 LLR+ ++S G + N++ K + +L++SLGPKG+DKML DVTITNDGATI++ M+V + AKL++E +++ D E+GDGTT VVV+AG LLE+AE LL + IHP I EGY A ++E L+ IA K Sbjct: 4 LLREGTQRST--GNEVILNNIAVAKILLEMLKSSLGPKGLDKMLVEGQ-DVTITNDGATIVKNMEVQHPTAKLLIETAKTVDTEVGDGTTSVVVLAGLLLEKAEDLLNQKIHPTVIIEGYRKALNSSLELLKNIADK 137
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: THSG_SULSH (Thermosome subunit gamma OS=Sulfolobus shibatae GN=thsC PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.148e-26 Identity = 66/137 (48.18%), Postives = 94/137 (68.61%), Query Frame = 3 Query: 150 LLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQK 560 LLR+ ++S G + N++ K + +L++SLGPKG+DKML D+TITNDGATI++ M+V + AKL++E +++ D E+GDGTT VVV+AG LLE+AE LL + IHP I EGY A ++E L+ IA K Sbjct: 4 LLREGTQRST--GNEVILNNIAVAKILLEMLKSSLGPKGLDKMLVEGQ-DITITNDGATIVKNMEVQHPTAKLLIETAKTVDTEVGDGTTSVVVLAGLLLEKAEDLLNQKIHPTVIIEGYRKALSSSLELLKSIADK 137
BLAST of FC875400 vs. ExPASy Swiss-Prot
Match: TCPG_TETPY (T-complex protein 1 subunit gamma OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.148e-26 Identity = 61/148 (41.22%), Postives = 94/148 (63.51%), Query Frame = 3 Query: 138 RPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLND 581 +P ++L Q ++ G AQ AN+SA KAV+ I+ ++LGP+ M KML P G + +TNDG IL ++DV++ AK M+EL+R QD E+GDGTT V++MAG ++ A+ +ER IHP I Y A +++ +E +A + +D Sbjct: 7 QPIMVLNQNTKRES--GKKAQLANISASKAVSEIVTSTLGPRSMLKMLLDPMGGIVMTNDGNAILREIDVNHPAAKSMIELARVQDEEVGDGTTSVIIMAGEMMSAAKPFIERDIHPSIIVTAYYRALEESIKKIEELAVPIDVNNDD 152 The following BLAST results are available for this feature:
BLAST of FC875400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 406
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875400 ID=FC875400; Name=FC875400; organism=Citrus clementina; type=EST; length=723bpback to top |