FC875404

Overview
NameFC875404
Unique NameFC875404
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875404 vs. ExPASy Swiss-Prot
Match: KATG_ACIB3 (Catalase-peroxidase OS=Acinetobacter baumannii (strain AB307-0294) GN=katG PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.424e-13
Identity = 60/180 (33.33%), Postives = 82/180 (45.56%), Query Frame = 3
Query:  165 NCTPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 581
            N T L +R+AWH+AGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG + +E +G     F  GR+D  EP  +    D K+   H                                      +R  FG  M + D++IVAL +GGHTLG+ H
Sbjct:   88 NYTGLFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEGPQASGDPRSAAPFIRATFG-NMAMDDEEIVALIAGGHTLGKTH 266          
BLAST of FC875404 vs. ExPASy Swiss-Prot
Match: KATG_RHOBA (Catalase-peroxidase OS=Rhodopirellula baltica GN=katG PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 70/240 (29.17%), Postives = 93/240 (38.75%), Query Frame = 3
Query:  174 PLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP-------PQEGRLPDAKQGNDH---------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKE------------------------------------RSGFEGPWTRHPLIFDNSYFTEL 656
            PL +R+AWHSAGTY V    GG   GT R A   +   N  LD A RLL P K+++ + IS+ADL  L G   +E  G     F  GR+D  EP       P+   L D +   D                                  +R+ FG +M ++D++ VAL +GGHT G+ H                                       SG EG WT  P  + + YF  L
Sbjct:  200 PLFIRMAWHSAGTYRVSDGRGGASDGTQRFAPLNSWPDNANLDKARRLLWPIKQKYGSKISWADLMVLTGNCALEDMGFETFGFAGGREDVWEPQKDVYWGPETEWLGDKRYSGDRDLQNPLAAVQMGLIYVNPEGPNGKPDPIAAAKDIRETFG-RMAMNDEETVALIAGGHTFGKAHGAASPDGNMGVEPEGEGLAAQGLGWINTHGTGNAGDTITSGLEGAWTSTPAEWSHGYFENL 438          
BLAST of FC875404 vs. ExPASy Swiss-Prot
Match: KATG_ENT38 (Catalase-peroxidase OS=Enterobacter sp. (strain 638) GN=katG PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 61/176 (34.66%), Postives = 79/176 (44.89%), Query Frame = 3
Query:  177 LMLRIAWHSAGTY-DVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 581
            L +R+AWH AGTY  V  + G   G  R A   A   N  LD A RLL P K+++   IS+ADLY LAG V +E +G     F  GR+D  EP  +    D K    H                                      +R  FG  MG++D++ VAL +GGHTLG+ H
Sbjct:   99 LFIRMAWHGAGTYRSVDGRGGAGRGQQRFAPLNAWPDNVSLDKARRLLWPIKQKYGQKISWADLYILAGNVALENSGFRTFGFGAGREDVWEPDMDVNWGDEKAWLTHRDPESLAKRPLAATEMGLIYVNPEGPNASGEPLSAAAAIRATFG-NMGMNDEETVALIAGGHTLGKTH 273          
BLAST of FC875404 vs. ExPASy Swiss-Prot
Match: KATG_COLP3 (Catalase-peroxidase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=katG PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 71/240 (29.58%), Postives = 97/240 (40.42%), Query Frame = 3
Query:  174 PLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP-----------------PQEGRL----------------------PDAKQGNDHLRQVFGAQMGLSDKDIVA-LSGGHTLGRCHKER------------------------------------SGFEGPWTRHPLIFDNSYFTELL 659
            PLM+R+AWHSAG Y V    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL  L+G V +E  G     F  GR D  EP                  ++G+L                      PD     + +R  FG +M ++D++IVA L+GGHTLG+ H  +                                    SG EG WT  P  + ++Y   L+
Sbjct:   99 PLMIRMAWHSAGVYRVHDGRGGASGGQQRFAPLNSWPDNVNLDKARRLLWPVKQKYGRKISWADLMVLSGNVALESMGFKTFGFAGGRTDDWEPDLVYWGPETAMLSDKRRDKKGKLKGPLAAVEMGLIYVNPEGPHGKPDPLLAANDIRMSFG-RMAMNDEEIVALLAGGHTLGKAHGAKKPNGCVGAEPAAADIEAQGLGWKNKCGTGVGADTISSGLEGAWTVTPTQWSSNYLDNLM 337          
BLAST of FC875404 vs. ExPASy Swiss-Prot
Match: KATG_PECCP (Catalase-peroxidase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=katG PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.135e-13
Identity = 73/245 (29.80%), Postives = 99/245 (40.41%), Query Frame = 3
Query:  177 LMLRIAWHSAGTYDVKT-KTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQE--------------GRL-----------------------PDAKQGN-DHLR-----QVFGAQMGLSDKDIVALS-GGHTLGRCHKE-----------------------------------RSGFEGPWTRHPLIFDNSYFTELLTGE 668
            LM+R+AWHSAGTY     + GG  G  R A   +   N  LD A RLL P K+++   +S+ADL  LAG +  E  G     F  GR+D   P ++              GR                        P+   GN D LR     +V  ++M ++D++ VAL+ GGHT+G+ H                                      SG EG WT HP  +DN +F  LL  E
Sbjct:   92 LMIRMAWHSAGTYRTADGRGGGGTGNQRFAPLNSWPDNVSLDKARRLLWPIKKKYGNKLSWADLIILAGNIAYESMGLKTFGFAFGREDIWHPEKDIYWGSEKEWLAKSTGRYGSDDRTTLENPLAAVQMGLIYVNPEGVDGNPDPLRTAQDMRVTFSRMAMNDEETVALTAGGHTVGKTHGNGDASLLGKAPEGTDVGEQGLGWHNPTGSGKGRYTVTSGLEGAWTTHPTQWDNGFFHMLLNHE 336          
BLAST of FC875404 vs. ExPASy Swiss-Prot
Match: KATG2_LEGPN (Catalase-peroxidase 2 OS=Legionella pneumophila GN=katG2 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.135e-13
Identity = 61/191 (31.94%), Postives = 86/191 (45.03%), Query Frame = 3
Query:  165 NCTPLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAE---------------------------------------PPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKERSG-FEGP 608
            N  PL +R++WH+AGTY +    GG   G  R A + +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G   I F  GR+D  E                                       P     +PD     + +R+ FG +M ++D++ VAL +GGH  G+ H   SG + GP
Sbjct:   97 NYGPLFIRMSWHAAGTYRIYDGRGGANGGFQRFAPQNSWPDNANLDKARRLLWPIKQKYGRKISWADLLVLAGNVAMESMGFKTIGFAGGREDAWEAININWGPEGKWLESKRQDKDGKLEKPLAATVMGLIYVNPEGPNGVPDPLAAAEKIRETFG-RMAMNDEETVALIAGGHAFGKTHGAASGKYLGP 286          
BLAST of FC875404 vs. ExPASy Swiss-Prot
Match: KATG2_LEGPL (Catalase-peroxidase 2 OS=Legionella pneumophila (strain Lens) GN=katG2 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.135e-13
Identity = 61/191 (31.94%), Postives = 86/191 (45.03%), Query Frame = 3
Query:  165 NCTPLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAE---------------------------------------PPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKERSG-FEGP 608
            N  PL +R++WH+AGTY +    GG   G  R A + +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G   I F  GR+D  E                                       P     +PD     + +R+ FG +M ++D++ VAL +GGH  G+ H   SG + GP
Sbjct:   97 NYGPLFIRMSWHAAGTYRIYDGRGGANGGFQRFAPQNSWPDNANLDKARRLLWPIKQKYGRKISWADLLVLAGNVAMESMGFKTIGFAGGREDAWEAININWGTEGKWLESKRQDKVGKLEKPLAATVMGLIYVNPEGPNGVPDPLAAAEKIRETFG-RMAMNDEETVALIAGGHAFGKTHGAASGKYLGP 286          
BLAST of FC875404 vs. ExPASy Swiss-Prot
Match: KATG2_LEGPH (Catalase-peroxidase 2 OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=katG2 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.135e-13
Identity = 61/191 (31.94%), Postives = 86/191 (45.03%), Query Frame = 3
Query:  165 NCTPLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAE---------------------------------------PPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKERSG-FEGP 608
            N  PL +R++WH+AGTY +    GG   G  R A + +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G   I F  GR+D  E                                       P     +PD     + +R+ FG +M ++D++ VAL +GGH  G+ H   SG + GP
Sbjct:   97 NYGPLFIRMSWHAAGTYRIYDGRGGANGGFQRFAPQNSWPDNANLDKARRLLWPIKQKYGRKISWADLLVLAGNVAMESMGFKTIGFAGGREDAWEAININWGPEGKWLESKRQDKDGKLEKPLAATVMGLIYVNPEGPNGVPDPLAAAEKIRETFG-RMAMNDEETVALIAGGHAFGKTHGAASGKYLGP 286          
BLAST of FC875404 vs. ExPASy Swiss-Prot
Match: KATG2_LEGPC (Catalase-peroxidase 2 OS=Legionella pneumophila (strain Corby) GN=katG2 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.135e-13
Identity = 61/191 (31.94%), Postives = 86/191 (45.03%), Query Frame = 3
Query:  165 NCTPLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAE---------------------------------------PPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKERSG-FEGP 608
            N  PL +R++WH+AGTY +    GG   G  R A + +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G   I F  GR+D  E                                       P     +PD     + +R+ FG +M ++D++ VAL +GGH  G+ H   SG + GP
Sbjct:   97 NYGPLFIRMSWHAAGTYRIYDGRGGANGGFQRFAPQNSWPDNANLDKARRLLWPIKQKYGRKISWADLLVLAGNVAMESMGFKTIGFAGGREDAWEAININWGPEGKWLESKRQDKDGKLEKPLAATVMGLIYVNPEGPNGVPDPLAAAEKIRETFG-RMAMNDEETVALIAGGHAFGKTHGAASGKYLGP 286          
BLAST of FC875404 vs. ExPASy Swiss-Prot
Match: KATG2_LEGPA (Catalase-peroxidase 2 OS=Legionella pneumophila (strain Paris) GN=katG2 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.135e-13
Identity = 61/191 (31.94%), Postives = 86/191 (45.03%), Query Frame = 3
Query:  165 NCTPLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAE---------------------------------------PPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKERSG-FEGP 608
            N  PL +R++WH+AGTY +    GG   G  R A + +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G   I F  GR+D  E                                       P     +PD     + +R+ FG +M ++D++ VAL +GGH  G+ H   SG + GP
Sbjct:   97 NYGPLFIRMSWHAAGTYRIYDGRGGANGGFQRFAPQNSWPDNANLDKARRLLWPIKQKYGRKISWADLLVLAGNVAMESMGFKTIGFAGGREDAWEAININWGPEGKWLESKRQDKDGKLEKPLAATVMGLIYVNPEGPNGVPDPLAAAEKIRETFG-RMAMNDEETVALIAGGHAFGKTHGAASGKYLGP 286          
The following BLAST results are available for this feature:
BLAST of FC875404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
KATG_ACIB32.424e-1333.33Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]
KATG_RHOBA3.166e-1329.17Catalase-peroxidase OS=Rhodopirellula baltica GN=k... [more]
KATG_ENT383.166e-1334.66Catalase-peroxidase OS=Enterobacter sp. (strain 63... [more]
KATG_COLP33.166e-1329.58Catalase-peroxidase OS=Colwellia psychrerythraea (... [more]
KATG_PECCP4.135e-1329.80Catalase-peroxidase OS=Pectobacterium carotovorum ... [more]
KATG2_LEGPN4.135e-1331.94Catalase-peroxidase 2 OS=Legionella pneumophila GN... [more]
KATG2_LEGPL4.135e-1331.94Catalase-peroxidase 2 OS=Legionella pneumophila (s... [more]
KATG2_LEGPH4.135e-1331.94Catalase-peroxidase 2 OS=Legionella pneumophila su... [more]
KATG2_LEGPC4.135e-1331.94Catalase-peroxidase 2 OS=Legionella pneumophila (s... [more]
KATG2_LEGPA4.135e-1331.94Catalase-peroxidase 2 OS=Legionella pneumophila (s... [more]

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Properties
Property NameValue
Genbank descriptionC31403E09EF CTVClemen1 Citrus clementina cDNA clone C31403E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875404 ID=FC875404; Name=FC875404; organism=Citrus clementina; type=EST; length=713bp
GGTGCTCTGCTCGTGCCACTCTCGTTTGTTAAGGATTTGCGTCTCTCTTT
CTCATTTCATTCAGCGTTGAAAAGATGACGAAGAATTACCCCACTGTTAG
CGAGGATTACAAGAAGGCCGTGGAGAAATGCAAGAGGAAGCTCAGAGGCT
TCATCGCTGAGAAGAACTGCACTCCACTCATGCTCCGTATCGCGTGGCAC
TCAGCTGGTACATATGATGTGAAGACCAAGACCGGAGGTCCATTCGGAAC
CATGAGGCTCGCTGCTGAGCAGGCACACTCAGCCAACAACGGCCTCGATA
TTGCCGTTAGGCTTTTGGAGCCGTTCAAGGAGCAGTTCCCTACCATCTCC
TACGCTGACCTTTATCAGCTTGCTGGTGTTGTTGGCGTTGAGGTTACCGG
TGGGCCCGATATCCCCTTCCACCCGGGAAGAGATGACAAGGCTGAGCCAC
CTCAAGAAGGCCGGCTTCCTGATGCTAAACAGGGTAATGATCACTTGAGG
CAAGTCTTTGGTGCTCAGATGGGCCTCAGCGACAAGGATATTGTTGCTCT
CTCTGGTGGCCACACCCTGGGAAGGTGCCACAAGGAGAGGTCTGGATTTG
AGGGACCATGGACCCGNCACCCTCTCATTTTTGACAATTCCTACTTCACG
GAGCTCTTGACTGGTGAGAAGGATGGTCTTCTGNCATTGCCATCCGACAA
GGCCCTTCTGGAT
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