FC875407

Overview
NameFC875407
Unique NameFC875407
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875407 vs. ExPASy Swiss-Prot
Match: SAHH_BRUA1 (Adenosylhomocysteinase OS=Brucella abortus (strain S19) GN=ahcY PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.194e-43
Identity = 86/145 (59.31%), Postives = 104/145 (71.72%), Query Frame = 1
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAE 588
            + ++F VKD+S AD+GR E+++AE EMPGLMA R EFG SQP KGA+I+GSLHMTIQTAVLIETL  LGAEVRW SCNIFSTQDH               KGETL+EYW  T++   W  G   ++I+DDGGDAT+ I  G +AE
Sbjct:    3 ASQDFVVKDISLADWGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFSTQDHAAAAIAATGTPVFAVKGETLEEYWTYTDQIFQWPDGEPSNMILDDGGDATMYILIGARAE 147          
BLAST of FC875407 vs. ExPASy Swiss-Prot
Match: SAHH_ACIAC (Adenosylhomocysteinase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.089e-43
Identity = 87/147 (59.18%), Postives = 107/147 (72.79%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWG----PGGGPDLIVDDGGDATLLIHEGVKAEE 591
            +  + D+S AD+GR EI++AE EMPGLMA R EF  +QP KGA+ITGSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQDH               KGE+L++YW  T +  D+G    PG GP++I+DDGGDATLL+H G +AE+
Sbjct:   10 DLAIADISLADWGRKEIKIAETEMPGLMAIREEFAAAQPLKGARITGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAAGGTPVFAIKGESLEDYWDYTHRIFDFGAKGTPGEGPNMILDDGGDATLLMHLGQRAEK 156          
BLAST of FC875407 vs. ExPASy Swiss-Prot
Match: SAHH_XYLFA (Adenosylhomocysteinase OS=Xylella fastidiosa GN=ahcY PE=3 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.057e-42
Identity = 89/180 (49.44%), Postives = 118/180 (65.56%), Query Frame = 1
Query:  145 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW----GPGGGPDLIVDDGGDATLLIHEGVKAEEIYKKTGKLPDPASTDNAEFQIVLTIIR 672
            +++    +K+ D+S  D+GR EI++AE EMPGLM+ R ++   QP KG ++TGSLHMTIQTAVLIETL  +GA+VRW SCNIFSTQDH              WKGETL+EYW CT +AL +    G   GP+LIVDDGGDATLLIH+G + E      G       +D+ E Q++  +++
Sbjct:    6 QTSPNTHYKIADISLTDWGRKEIDIAEHEMPGLMSIRRKYASKQPLKGVRVTGSLHMTIQTAVLIETLKDIGADVRWASCNIFSTQDHAAAAIATSGTPVFAWKGETLEEYWDCTLQALTFTLSDGTLTGPELIVDDGGDATLLIHKGYELE-----NGSTWVDEPSDSLEEQVIKRLLK 180          
BLAST of FC875407 vs. ExPASy Swiss-Prot
Match: SAHH_RHOCA (Adenosylhomocysteinase OS=Rhodobacter capsulatus GN=ahcY PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.057e-42
Identity = 91/158 (57.59%), Postives = 109/158 (68.99%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYKKTGKLPDPASTD 636
            ++ VKD+  A+FGR E+++AE EMPGLMACR EFGPSQP KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQDH               KGETL+EYW  T+K   + P G  ++I+DDGGDATL I  G + E    +T  +  P S D
Sbjct:    3 DYIVKDIKLAEFGRKELDIAETEMPGLMACREEFGPSQPLKGARIAGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAAGGTPVFAVKGETLEEYWAYTDKIFQF-PEGTCNMILDDGGDATLYILLGARVEA--GETDLIATPTSED 157          
BLAST of FC875407 vs. ExPASy Swiss-Prot
Match: SAHH_SYNPX (Adenosylhomocysteinase OS=Synechococcus sp. (strain WH8102) GN=ahcY PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.380e-42
Identity = 84/145 (57.93%), Postives = 103/145 (71.03%), Query Frame = 1
Query:  157 GREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE 591
            G +  + D++QA FGR E+++AE EMPGLMA R ++G  +P KGA+I GSLHMTIQTA LIETL  LGAEVRW SCNIFSTQDH               KGETL+EYW  T + L+WG GG P++I+DDGGDAT L+  G KAE+
Sbjct:   14 GVDCVIADINQAAFGRKELDIAETEMPGLMALREKYGTEKPLKGARIAGSLHMTIQTACLIETLVELGAEVRWASCNIFSTQDHAAAAIAAQNIPVFAVKGETLEEYWEYTHRILEWGDGGSPNMILDDGGDATGLVMLGSKAEQ 158          
BLAST of FC875407 vs. ExPASy Swiss-Prot
Match: SAHH_ACISJ (Adenosylhomocysteinase OS=Acidovorax sp. (strain JS42) GN=ahcY PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.380e-42
Identity = 92/159 (57.86%), Postives = 107/159 (67.30%), Query Frame = 1
Query:  172 VKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGP----GGGPDLIVDDGGDATLLIHEGVKAEEIYKKTGKLPDPASTD 636
            + D+S AD+GR EI +AE EMPGLMA R EF   QP KGA+ITGSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQDH               KGETL +YW  T +  D+GP    G GP++I+DDGGDATLL+H G +AE   K    L  P S +
Sbjct:   13 IADISLADWGRKEIRIAETEMPGLMAIREEFAAKQPLKGARITGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAATGTPVFAIKGETLVDYWDYTHRIFDFGPKGSEGEGPNMILDDGGDATLLMHLGKRAE---KDASVLAHPGSEE 168          
BLAST of FC875407 vs. ExPASy Swiss-Prot
Match: SAHH_DIAST (Adenosylhomocysteinase OS=Diaphorobacter sp. (strain TPSY) GN=ahcY PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.354e-42
Identity = 91/159 (57.23%), Postives = 108/159 (67.92%), Query Frame = 1
Query:  172 VKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGP----GGGPDLIVDDGGDATLLIHEGVKAEEIYKKTGKLPDPASTD 636
            + D+S A++GR EI +AE EMPGLMA R EF   QP KGA+ITGSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQDH               KGETL +YW  T +  D+GP    G GP++I+DDGGDATLL+H G +AE   K    L +P S +
Sbjct:   13 IADISLAEWGRKEIRIAETEMPGLMAIREEFAAKQPLKGARITGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAATGTPVFAIKGETLVDYWDYTHRIFDFGPKGSEGEGPNMILDDGGDATLLMHLGKRAE---KDASVLANPGSEE 168          
BLAST of FC875407 vs. ExPASy Swiss-Prot
Match: SAHH_AZOSE (Adenosylhomocysteinase OS=Azoarcus sp. (strain EbN1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.354e-42
Identity = 90/158 (56.96%), Postives = 106/158 (67.09%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYKKTGKLPDPASTD 636
            ++ V DL+ A +GR EI +AE EMPGLMA R EF   QP KGA+ITGSLHMTIQTAVLIETLTALGAEVRW SCNIFSTQDH               KGE+L +YW  T +  +W  GG  ++I+DDGGDATLL+H G +AE   K    L  P S +
Sbjct:   10 DYVVADLALAGWGRKEIRIAETEMPGLMAIREEFAVVQPLKGARITGSLHMTIQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAIAASGVPVFAVKGESLADYWDYTHRIFEWRDGGYSNMILDDGGDATLLLHLGARAE---KDVSVLAKPGSEE 164          
BLAST of FC875407 vs. ExPASy Swiss-Prot
Match: SAHH_PROM3 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9303) GN=ahcY PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.074e-42
Identity = 86/155 (55.48%), Postives = 104/155 (67.10%), Query Frame = 1
Query:  124 AMALSVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAE 588
            A+  S+    +  ++ V D+  ADFGR E+ +AE EMPGLMA R + G  +P KGA+I GSLHMTIQT VLIETL ALGA+VRW SCNIFSTQDH               KGETL EYW  T + L+WG GG P++I+DDGGDAT L+  G KAE
Sbjct:    3 AVPTSMASLQAPPQYVVADIDLADFGRKELSIAETEMPGLMALRVKHGSEKPLKGARIAGSLHMTIQTGVLIETLVALGADVRWASCNIFSTQDHAAAAIAASGVPVFATKGETLDEYWAYTHRILEWGDGGTPNMILDDGGDATGLVMLGSKAE 157          
BLAST of FC875407 vs. ExPASy Swiss-Prot
Match: SAHH_MESSB (Adenosylhomocysteinase OS=Mesorhizobium sp. (strain BNC1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.074e-42
Identity = 85/142 (59.86%), Postives = 102/142 (71.83%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAE 588
            ++ V D+S A +GR EIE+AE EMPGLMACR EFG ++P KGA+ITGSLHMTIQTAVLIETL +LGAEVRW SCNIFSTQDH               KGETL+EYW  T++   W  G   ++I+DDGGDAT+ I  G +AE
Sbjct:    5 DYVVADMSLAAWGRKEIEIAETEMPGLMACREEFGEAKPLKGARITGSLHMTIQTAVLIETLKSLGAEVRWASCNIFSTQDHAAAAIAETGTPVFAVKGETLEEYWTYTDRIFQWPDGQPSNMILDDGGDATMYILLGARAE 146          
The following BLAST results are available for this feature:
BLAST of FC875407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_BRUA16.194e-4359.31Adenosylhomocysteinase OS=Brucella abortus (strain... [more]
SAHH_ACIAC8.089e-4359.18Adenosylhomocysteinase OS=Acidovorax avenae subsp.... [more]
SAHH_XYLFA1.057e-4249.44Adenosylhomocysteinase OS=Xylella fastidiosa GN=ah... [more]
SAHH_RHOCA1.057e-4257.59Adenosylhomocysteinase OS=Rhodobacter capsulatus G... [more]
SAHH_SYNPX1.380e-4257.93Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_ACISJ1.380e-4257.86Adenosylhomocysteinase OS=Acidovorax sp. (strain J... [more]
SAHH_DIAST2.354e-4257.23Adenosylhomocysteinase OS=Diaphorobacter sp. (stra... [more]
SAHH_AZOSE2.354e-4256.96Adenosylhomocysteinase OS=Azoarcus sp. (strain EbN... [more]
SAHH_PROM33.074e-4255.48Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_MESSB3.074e-4259.86Adenosylhomocysteinase OS=Mesorhizobium sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionC31403F01EF CTVClemen1 Citrus clementina cDNA clone C31403F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875407 ID=FC875407; Name=FC875407; organism=Citrus clementina; type=EST; length=689bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGTCCTTCACAGCCCTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGACCACGCGGCCGCCGCCATCGCACGTGACTCCGCCTCCGTCTTTGCC
TGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACGGAGAAAGCCCT
GGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCGATGACGGTGGTG
ACGCCACGTTGTTGATCCACGAGGGAGTCAAAGCTGAGGAGATCTACAAG
AAGACCGGGAAGTTGCCCGACCCGGCCTCCACCGACAACGCCGAGTTTCA
GATTGTTTTGACTATCATTAGAGATGGGTTGAAGGCCGA
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