FC875475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_ENT38 (Aminomethyltransferase OS=Enterobacter sp. (strain 638) GN=gcvT PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.065e-16 Identity = 53/149 (35.57%), Postives = 77/149 (51.68%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLL 665 ++T L++ H G +MV F GW MP+ Y I E R + +FDVSHM + L+G FL L+ DVA L PG + N +GG IDD ++ +D LVVN+ R+KDL+ I H + + V + D+ SL+ Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHA-VRTDAGMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLKTPGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWISQHAEKYA-----VEITVRDDLSLI 145
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_CHRVO (Aminomethyltransferase OS=Chromobacterium violaceum GN=gcvT PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.065e-16 Identity = 50/131 (38.17%), Postives = 70/131 (53.44%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 K+T L D H+A G KMV FAGW MPI Y + E + R + +FDVSHM + + G D +L+KL+ DVA L G + G +DD ++ + +VVNAG +KDLA +E+ F Sbjct: 5 KRTPLFDAHIAAGAKMVDFAGWEMPIHYGSQLKEHEI-VRSDAGMFDVSHMTVIDITGADAKAWLQKLIANDVAKLGFEGKALYSGMLTPEGTVVDDLIVYLTAYGY-RMVVNAGTTEKDLAWMESQKAGF 133
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_CHLL2 (Aminomethyltransferase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=gcvT PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.697e-16 Identity = 45/131 (34.35%), Postives = 72/131 (54.96%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 +KKTAL+ +H G K++ F G+ MP+QY I E R+ LFDVSHM ++G FL+ L D++ ++ G + +GG +DD +I ++ + +L+VNA KD A I+ H+ +F Sbjct: 1 MKKTALYSWHEQAGAKIIDFGGYLMPVQYSGIIAEHKA-VREAAGLFDVSHMGNFYVRGVRAGEFLQYLTTNDLSKVSDGEAQYNLMLYTDGGVVDDLIIYRIDAETYFLIVNASNAQKDYAWIQKHIGAF 130
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_BACTN (Aminomethyltransferase OS=Bacteroides thetaiotaomicron GN=gcvT PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.697e-16 Identity = 49/120 (40.83%), Postives = 67/120 (55.83%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKD 578 +K T + H+A G KM FAG++MPI+Y I E C G +FDVSHM +KG + FL+K+ +VA L PG T F NE GG +DD ++ + + LVVNA +KD Sbjct: 1 MKTTPFTEKHIALGAKMHEFAGYNMPIEYSGIIDEHLTVCNAVG-VFDVSHMGEFWVKGPQALAFLQKVTSNNVAALVPGKIQYTCFPNEEGGIVDDLLVYCYEPEKYLLVVNAANIEKD 119
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_PROMT (Aminomethyltransferase OS=Prochlorococcus marinus (strain NATL2A) GN=gcvT PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.523e-16 Identity = 49/133 (36.84%), Postives = 72/133 (54.14%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVI-----TKVKDDHIYLVVNAGCRDKDLAHIEAHM 602 L +T L+ GGKMVPFA W MP+ + I E R+N +FD+SHM + LKGK+ L+ LV +DV + P TVF ENGG DD +I ++ I LV+NA ++ D+ + +++ Sbjct: 3 LLQTPLYQECKELGGKMVPFANWEMPVSFSGLIEEHNA-VRKNVGMFDISHMGVVQLKGKNIKSALQNLVPSDVFRIGPSEACYTVFLKENGGIQDDLIIYDQGVLDTNEESIVLVINAARKESDIEWLSSNL 134
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_ALTMD (Aminomethyltransferase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=gcvT PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.523e-16 Identity = 49/129 (37.98%), Postives = 69/129 (53.49%), Query Frame = 3 Query: 228 TALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 TALH H+ G KMV F GW MPI Y I E RQ+ +FDVSHM + +KG +L+ L+ DVA L G + NE GG +DD ++ + + LVVN+ R+KD+ + + + F Sbjct: 5 TALHTKHLEAGAKMVDFFGWDMPINYGSQIEEHHA-VRQDAGMFDVSHMTIVDVKGAQAKAYLQYLLANDVAKLKDKGKALYSGMLNEEGGVVDDLIVYHFDETNYRLVVNSATREKDMNWLMSKAEGF 132
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_THISH (Aminomethyltransferase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=gcvT PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.601e-16 Identity = 49/131 (37.40%), Postives = 68/131 (51.91%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 K+T L++ H+ G +MV F GWSMP+ Y I E R++ +FDVSHM + ++G +L L+ DVA L PG + GG +DD + + D LVVNA RDKDLA + F Sbjct: 3 KQTPLYEKHLEAGARMVDFGGWSMPLHYGSQIEEHHA-VRRDAGMFDVSHMTVVDVQGNGARDYLRFLLANDVAKLKVPGKALYSCMLTPEGGVVDDLITYYLSDTFYRLVVNAATRDKDLAWMRDRATGF 132
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_LEPBP (Aminomethyltransferase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=gcvT PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.601e-16 Identity = 49/144 (34.03%), Postives = 70/144 (48.61%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKG--KDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGD-VSWH 641 LK+T LH H G KMVPF GW MP+QY I++ L R N +FDVSHM + + G D + FLE + ++ + G NE GG +DD + K D + NA + H+ ++K + D +WH Sbjct: 3 LKQTPLHSIHKEMGAKMVPFGGWDMPVQY-TGIIQEHLATRANAGIFDVSHMGEIFVTGDANDVLDFLESVTCNTISTMKEGQVQYNAVVNEVGGLVDDITVYKFNDTKYMICSNASNFEAVTQHLLKYVKGNVSIANDSKNWH 145
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_LEPBA (Aminomethyltransferase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=gcvT PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.601e-16 Identity = 49/144 (34.03%), Postives = 70/144 (48.61%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKG--KDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGD-VSWH 641 LK+T LH H G KMVPF GW MP+QY I++ L R N +FDVSHM + + G D + FLE + ++ + G NE GG +DD + K D + NA + H+ ++K + D +WH Sbjct: 3 LKQTPLHSIHKEMGAKMVPFGGWDMPVQY-TGIIQEHLATRANAGIFDVSHMGEIFVTGDANDVLDFLESVTCNTISTMKEGQVQYNAVVNEVGGLVDDITVYKFNDTKYMICSNASNFEAVTQHLLKYVKGNVSIANDSKNWH 145
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_ERWT9 (Aminomethyltransferase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=gcvT PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.601e-16 Identity = 50/131 (38.17%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 ++T L H A+G +MV F GW MP+ Y S M+ R++ +FDVSHM + L G FL L+ DVA L PG + N + G IDD ++ + +D LVVN+ R+KDLA I H ++ Sbjct: 3 QQTPLFAQHQASGARMVDFHGWMMPLHY-GSQMDEHHAVRRDAGMFDVSHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYSAMLNASAGVIDDLIVYFISEDFFRLVVNSATREKDLAWIVEHAAAY 132 The following BLAST results are available for this feature:
BLAST of FC875475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 328
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875475 ID=FC875475; Name=FC875475; organism=Citrus clementina; type=EST; length=665bpback to top |