FC875475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_HALOH (Aminomethyltransferase OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=gcvT PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.087e-15 Identity = 46/120 (38.33%), Postives = 67/120 (55.83%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKD 578 +KKT L + H G +++ F GWSMP+QY SI+E R LFDVSHM + ++G + L+K+V +VA L G T ++GG IDD ++ + D +VVNA +KD Sbjct: 1 MKKTPLFEIHKELGARLIEFHGWSMPVQYT-SIIEEHKAVRNQCGLFDVSHMGEILVEGPGALESLQKIVTNNVARLKKGQVLYTPMCKDDGGIIDDLLVYCLGQDKYLMVVNASNIEKD 119
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_ECOL6 (Aminomethyltransferase OS=Escherichia coli O6 GN=gcvT PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.087e-15 Identity = 49/131 (37.40%), Postives = 68/131 (51.91%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 ++T L++ H G +MV F GW MP+ Y I E R + +FDVSHM + L G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + F Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHA-VRTDAGMFDVSHMTIVDLHGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPF 132
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_CUPTR (Aminomethyltransferase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=gcvT PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.087e-15 Identity = 49/127 (38.58%), Postives = 66/127 (51.97%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEA 596 L+ T L+ H A G +MV F GW MP+ Y I E R + +FDVSHMC + L G + FL L+ +V L PG + +E+GG IDD ++ +D LVVNAG D+ I A Sbjct: 3 LQATPLNAIHRALGARMVDFGGWDMPVNYGSQIEEHHA-VRNDAGMFDVSHMCVVDLAGPNTRAFLRGLLANNVDKLQTPGKALYSCMLDEHGGVIDDLIVYFFAEDRFRLVVNAGTAVGDIDWIRA 128
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SALAR (Aminomethyltransferase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=gcvT PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.644e-15 Identity = 51/149 (34.23%), Postives = 75/149 (50.34%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLL 665 ++T L++ H G +MV F GW MP+ Y + E R + +FDVSHM + L G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDLA I H + + + + D+ SL+ Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQLDEHHA-VRTDAGMFDVSHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLAWITQHAEPYA-----IDITVRDDLSLI 145
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_MYCUA (Aminomethyltransferase OS=Mycobacterium ulcerans (strain Agy99) GN=gcvT PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.644e-15 Identity = 46/131 (35.11%), Postives = 64/131 (48.85%), Query Frame = 3 Query: 204 SDAENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEA 596 SDA L + L D H A G F GW MP+ Y ++ E R LFDVSH+ ++G F+ + D+ + PG T+ NE+GG IDD + V DD I+LV NA +A ++A Sbjct: 2 SDAPELMQGPLEDRHRALGASFAEFGGWLMPVSYTGTVSEHNAT-RNAAGLFDVSHLGKALVRGPGAAEFVNSALTNDLRRIGPGKAQYTLCCNESGGVIDDLIAYYVADDEIFLVPNAANTAAVVAALQA 131
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_LISMF (Aminomethyltransferase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=gcvT PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.644e-15 Identity = 46/139 (33.09%), Postives = 69/139 (49.64%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 635 L KT +H + G K + F GW +P+Q+ E R + LFDVSHM + +KG D +L+ L+ D+ + G + E GG++DD V+ K + LVVNA DKD + +++ GDVS Sbjct: 4 LLKTPIHPLYAKYGAKTIDFGGWDLPVQFAGIKAEHEA-VRTDAGLFDVSHMGEILVKGPDSTSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTDKDFEWMVKNIR------GDVS 135
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_LISMC (Aminomethyltransferase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=gcvT PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.644e-15 Identity = 46/139 (33.09%), Postives = 69/139 (49.64%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 635 L KT +H + G K + F GW +P+Q+ E R + LFDVSHM + +KG D +L+ L+ D+ + G + E GG++DD V+ K + LVVNA DKD + +++ GDVS Sbjct: 4 LLKTPIHPLYAKYGAKTIDFGGWDLPVQFAGIKAEHEA-VRTDAGLFDVSHMGEILVKGPDSTSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTDKDFEWMVKNIR------GDVS 135
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_CITK8 (Aminomethyltransferase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=gcvT PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.644e-15 Identity = 50/149 (33.56%), Postives = 76/149 (51.01%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLL 665 ++T L++ H G +MV F GW MP+ Y + E R + +FDVSHM + L+G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + + + + D+ SL+ Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQLDEHHA-VRTDAGMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPYA-----IDITVRDDLSLI 145
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_RALEJ (Aminomethyltransferase OS=Ralstonia eutropha (strain JMP134) GN=gcvT PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.677e-15 Identity = 52/146 (35.62%), Postives = 71/146 (48.63%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMK------SFTAKGGDVS 635 L+ T L+ H A G +MV F GW MP+ Y I E R + +FDVSHMC + L G + FL L+ +V L PG + +E GG IDD ++ +D LVVNA D+ I A + T + GDV+ Sbjct: 3 LQATPLNAIHRALGARMVDFGGWDMPVNYGSQIEEHNA-VRSDAGMFDVSHMCVVDLNGANTRAFLRGLLANNVDKLQTPGKALYSCMLDEKGGVIDDLIVYFFAEDRFRLVVNASTALGDIEWIRARNDATGSGVTITPRRGDVA 147
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_RALEH (Aminomethyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=gcvT PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.677e-15 Identity = 52/140 (37.14%), Postives = 69/140 (49.29%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 635 L+ T L+ H A G +MV F GW MP+ Y I E R + +FDVSHMC + L G + FL L+ +V L PG + +E GG IDD ++ +D LVVNA D+ I A A G DV+ Sbjct: 3 LQATPLNAIHRALGARMVDFGGWDMPVNYGSQIEEHNA-VRTDAGMFDVSHMCVVDLAGANTRSFLRGLLANNVDKLQTPGKALYSCMLDEKGGVIDDLIVYFFAEDRFRLVVNASTALGDIEWIRARN---AATGSDVT 138 The following BLAST results are available for this feature:
BLAST of FC875475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 328
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875475 ID=FC875475; Name=FC875475; organism=Citrus clementina; type=EST; length=665bpback to top |