FC875475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_PYRHO (Probable aminomethyltransferase OS=Pyrococcus horikoshii GN=gcvT PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 8.980e-12 Identity = 41/147 (27.89%), Postives = 77/147 (52.38%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLA---HIEAHMKSFTAKGGDVSWHIHD 650 +K+ + D+H + K+ FAGW MPI Y SI E L R +FDVSHM + +GKD + FL+ + D++ +GT T+ NE G D++++ + ++ ++ ++ +K A +++ ++ FT ++ +D Sbjct: 2 VKRVHIFDWHKEHARKIEEFAGWEMPIWYS-SIKEEHLAVRNAVGIFDVSHMGEIVFRGKDALKFLQYVTTNDISKPPAISGTYTLVLNERGAIKDETLVFNMGNNEYLMICDSDAFEKLYAWFTYLKRTIEQFTKLDLEIELKTYD 147
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_PYRAB (Probable aminomethyltransferase OS=Pyrococcus abyssi GN=gcvT PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.532e-11 Identity = 43/146 (29.45%), Postives = 75/146 (51.37%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLA---HIEAHMKSFTAKGGDVSWHIHD 650 K+ L D+H + K+ FAGW MPI Y SI E L R LFDVSHM + +GKD + FL+ + D++ +G T+ NE G D+++I + ++ ++ ++ +K A +++ ++ FT ++ +D Sbjct: 3 KRVHLFDWHKEHAKKIEEFAGWEMPIWYS-SIKEEHLAVRNAVGLFDVSHMGEIYFRGKDALKFLQYVTTNDISKPPAISGIYTLVLNERGAIKDETLIFNMGNNEYLMICDSDAFEKLYAWFTYLKKTIEQFTKLDLEIELKTYD 147
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_NOCFA (Aminomethyltransferase OS=Nocardia farcinica GN=gcvT PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.532e-11 Identity = 38/115 (33.04%), Postives = 56/115 (48.70%), Query Frame = 3 Query: 216 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNA 560 +L + +HD H G F GW MP+ Y ++ E R LFDVSH+ ++ G F+ + D+ + PG T+ + +GG IDD + V DD I+LV NA Sbjct: 5 DLLRGPVHDLHGELGATFAEFGGWQMPVAYAGTVGEHQA-VRTTVGLFDVSHLGKATVAGPGAAQFVNATLTNDLGRIHPGKAQYTLCCSADGGVIDDLIAYYVADDEIFLVPNA 118
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_HALSA (Probable aminomethyltransferase OS=Halobacterium salinarium GN=gcvT PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.000e-11 Identity = 42/134 (31.34%), Postives = 63/134 (47.01%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDD---HIYLVVNAG----CRDKDLAHIEAH 599 L+ + LH H G F GW+MP+ + D I R+ +FDVSHM + + G D +++L DV+ L PG T+++G IDD+V+ + D V NAG D+ H +AH Sbjct: 3 LRTSPLHGRHEDRGASFTEFGGWNMPVDF-DGIQAEHAAVREAAGIFDVSHMGEIEVSGPDAERLMQRLTTNDVSRLDPGDAQYAAITDDDGIMIDDTVVYRTPADWPGAFLFVPNAGHDAAAFDRWTDHRDAH 135
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_HALS3 (Probable aminomethyltransferase OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=gcvT PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.000e-11 Identity = 42/134 (31.34%), Postives = 63/134 (47.01%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDD---HIYLVVNAG----CRDKDLAHIEAH 599 L+ + LH H G F GW+MP+ + D I R+ +FDVSHM + + G D +++L DV+ L PG T+++G IDD+V+ + D V NAG D+ H +AH Sbjct: 3 LRTSPLHGRHEDRGASFTEFGGWNMPVDF-DGIQAEHAAVREAAGIFDVSHMGEIEVSGPDAERLMQRLTTNDVSRLDPGDAQYAAITDDDGIMIDDTVVYRTPADWPGAFLFVPNAGHDAAAFDRWTDHRDAH 135
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_STRAW (Aminomethyltransferase OS=Streptomyces avermitilis GN=gcvT PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.613e-11 Identity = 38/145 (26.21%), Postives = 70/145 (48.28%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDER 656 + TAL H + G M FAGW MP++Y S + L R LFD+SHM +++ G L ++ ++A + G T+ +GG +DD ++ ++++ +V NA ++ + + + T + G + D+R Sbjct: 7 RHTALDALHRSLGATMTDFAGWDMPLRY-GSERDEHLAVRSKAGLFDLSHMGEITVTGPGAAALLNYALVGNIASVGVGRARYTMICRADGGILDDLIVYRLQEQTYLVVANA-------SNAQVVLDALTERAGGFDAVVRDDR 143
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_FRASN (Aminomethyltransferase OS=Frankia sp. (strain EAN1pec) GN=gcvT PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.412e-11 Identity = 36/115 (31.30%), Postives = 57/115 (49.57%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKD-SIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNA 560 L+++ LH+ HV G K F GW MPI+Y ++ R +FDVSH+ + G F+ + D+ + PG T+ +E GG +DD + D+++LV NA Sbjct: 4 LRRSPLHERHVELGAKTAAFGGWEMPIEYAGRGVLAEHAAVRGAVGIFDVSHLGKARVAGPGAAEFVNTCLTNDLRRVGPGQAQYTLCCDETGGVVDDLIAYYYAVDNVFLVPNA 118
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_FRAAA (Aminomethyltransferase OS=Frankia alni (strain ACN14a) GN=gcvT PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.412e-11 Identity = 38/128 (29.69%), Postives = 62/128 (48.44%), Query Frame = 3 Query: 216 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKD-SIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEA 596 +L+++ L+ HV G KM F GW MPI+Y ++ R +FDVSH+ + G F+ + D+ +APG T+ N+ GG +DD + + + LV NA + +A + A Sbjct: 3 DLRRSPLYGRHVDLGAKMAGFGGWEMPIEYAGRGVLAEHQAVRGAVGIFDVSHLGKAEVTGAGAAEFVNACLSNDLGRIAPGQAQYTLCCNDEGGVVDDLIAYLFSGERVLLVPNAANNAEVVARLAA 130 The following BLAST results are available for this feature:
BLAST of FC875475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 328
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875475 ID=FC875475; Name=FC875475; organism=Citrus clementina; type=EST; length=665bpback to top |