FC875475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_THET8 (Aminomethyltransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=gcvT PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.446e-19 Identity = 52/139 (37.41%), Postives = 80/139 (57.55%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 635 +KKT L++ H+ G +MV FAG+ +P+QY SI+E L R+ +FDVSHM ++GK+ + FL+ D L G ++ NE GG +DD + ++ ++ +VVNA KDLAH++A K F + D S Sbjct: 1 MKKTPLYEAHLRLGARMVDFAGYLLPLQYT-SIVEEHLAVRRAVGVFDVSHMGEFLVRGKEALAFLQWATANDAGKLKVGRAQYSMLPNERGGVVDDIYLYRLGEEEYLMVVNAANIAKDLAHLQALAKGFRVELEDAS 138
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_GEOKA (Aminomethyltransferase OS=Geobacillus kaustophilus GN=gcvT PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.446e-19 Identity = 50/129 (38.76%), Postives = 74/129 (57.36%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMK 605 LK+T L + G K + F GW MP+Q+ SI E R LFDVSHM + ++G+ + FL+KL+ DVA L PG T+ E+GG++DD +I + ++ LVVNA +KD A + H++ Sbjct: 2 LKRTPLFSVYARCGAKTIEFGGWEMPVQFS-SIKEEHEAVRTRAGLFDVSHMGEIVVRGRGSLAFLQKLMTNDVAKLRPGRAQYTLMCYEDGGTVDDLLIYQKGENDYLLVVNAANTEKDFAWLSGHVE 129
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_BORPE (Aminomethyltransferase OS=Bordetella pertussis GN=gcvT PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.446e-19 Identity = 55/126 (43.65%), Postives = 71/126 (56.35%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIE 593 LK+T L + H+A G MV F GW MP+ Y S +E RQ+ +FDVSHM + + G D FL +LV DVA LA PG + N GG IDD +I D +VVNAG DKD+A ++ Sbjct: 5 LKRTPLAEEHLAAGACMVDFGGWDMPLAY-GSQLEEHHAVRQDAGMFDVSHMLNVDVGGADATAFLRRLVANDVARLATPGKALYSCMLNPQGGIIDDLIIYYFAPDQWRVVVNAGTADKDIAWMQ 129
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_BACSU (Aminomethyltransferase OS=Bacillus subtilis GN=gcvT PE=1 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 4.446e-19 Identity = 49/127 (38.58%), Postives = 73/127 (57.48%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAH 599 LK+T L D + GGK + F GW +P+Q+ SI + R LFDVSHM + + G D + FL++L+ DV+ L PG T +GG++DD +I + ++ LV+NA DKDLA ++ H Sbjct: 2 LKRTPLFDLYKEYGGKTIDFGGWELPVQFS-SIKKEHEAVRTAAGLFDVSHMGEVEVSGNDSLSFLQRLMTNDVSALTPGRAQYTAMCYPDGGTVDDLLIYQKGENRYLLVINASNIDKDLAWMKEH 127
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SHEPW (Aminomethyltransferase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=gcvT PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.807e-19 Identity = 54/133 (40.60%), Postives = 72/133 (54.14%), Query Frame = 3 Query: 225 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAK 620 KT L + H+ + GKMV F GW MP+ Y I E RQ+ +FDVSHM + + G D FL KL+ DVA L PG + NGG IDD + + D +VVN+ R+KDLA I +K F+ + Sbjct: 4 KTVLFNKHLESNGKMVDFHGWDMPLNYGSQIEEHHA-VRQDAGMFDVSHMTVVDVIGDDACAFLRKLLANDVAKLKVPGKALYGGMLDHNGGVIDDLITYYLSDTQYRIVVNSATREKDLAWINEQVKGFSVE 135
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SHEPA (Aminomethyltransferase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=gcvT PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.807e-19 Identity = 54/133 (40.60%), Postives = 72/133 (54.14%), Query Frame = 3 Query: 225 KTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAK 620 KT L + H+ + GKMV F GW MP+ Y I E RQ+ +FDVSHM + + G D FL KL+ DVA L PG + NGG IDD + + D +VVN+ R+KDLA I +K F+ + Sbjct: 4 KTVLFNKHLESNGKMVDFHGWDMPLNYGSQIEEHHA-VRQDAGMFDVSHMTVVDVIGDDACAFLRKLLANDVAKLKVPGKALYGGMLDHNGGVIDDLITYYLSDTEYRIVVNSATREKDLAWINEQVKGFSVE 135
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_PROMH (Aminomethyltransferase OS=Proteus mirabilis (strain HI4320) GN=gcvT PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.807e-19 Identity = 59/149 (39.60%), Postives = 78/149 (52.35%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLL 665 K+T L+D HVA G +MV F GW MP+ Y I E N RQ+ +FDVSHM + L G FL L+ DVA L G T N +GG IDD ++ + LVVN+ R+KDLA I H K + V + D+ +L+ Sbjct: 3 KQTPLYDEHVACGARMVDFHGWMMPLHYGSQIDEHH-NVRQDAGMFDVSHMTIVDLHGPQVKDFLRYLLANDVAKLTEKGKALYTGMLNASGGVIDDLIVYYFDETFYRLVVNSATREKDLAWITEHAKDYV-----VDIQVRDDLALI 145
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_PROM3 (Aminomethyltransferase OS=Prochlorococcus marinus (strain MIT 9303) GN=gcvT PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.807e-19 Identity = 51/135 (37.78%), Postives = 73/135 (54.07%), Query Frame = 3 Query: 216 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVI-----TKVKDDHIYLVVNAGCRDKDLAHIEAHMK 605 NL+ T LHD GG+MVPFAGW MP+Q+ + E RQ +FD+SHM L L+G + L+ LV D+ + PG TV NE GG +DD V+ K + +V+NA C + D ++ H++ Sbjct: 2 NLQHTPLHDLCRDAGGRMVPFAGWDMPVQFSGLLQEHQA-VRQQVGMFDISHMGVLRLEGTNPKDTLQALVPTDLNRIGPGEACYTVLLNETGGILDDLVVYDLGTNKQDSQSLLIVINAACSETDTIWLKQHLQ 135
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_FLAPJ (Aminomethyltransferase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=gcvT PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.807e-19 Identity = 50/127 (39.37%), Postives = 73/127 (57.48%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAH 599 +K TAL + H + G KMVPFAG++MP+QY+ E + R +FDVSHM LKG++ + ++K+ D + L G + N GG +DD +I K+ D+H LVVNA +KD I +H Sbjct: 1 MKNTALTNIHESLGAKMVPFAGYNMPVQYEGVNAEHEI-VRTGVGVFDVSHMGEFFLKGENALALIQKVTSNDASKLVDGKAQYSCLPNNEGGIVDDLIIYKIADNHYMLVVNASNIEKDWNWISSH 126
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_PROMM (Aminomethyltransferase OS=Prochlorococcus marinus (strain MIT 9313) GN=gcvT PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.584e-19 Identity = 52/135 (38.52%), Postives = 72/135 (53.33%), Query Frame = 3 Query: 216 NLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVI-----TKVKDDHIYLVVNAGCRDKDLAHIEAHMK 605 NL+ T LHD GG+MVPFAGW MP+Q+ + E RQ +FD+SHM L L+G + L+ LV D+ + PG TV NE GG +DD VI K + +V+NA C D ++ H++ Sbjct: 2 NLQHTPLHDLCRDAGGRMVPFAGWDMPVQFSGLLQEHQA-VRQQVGMFDISHMGVLRLEGTNPKDHLQALVPTDLNRIGPGEACYTVLLNETGGILDDLVIYDLGTNKQDSQSLLIVINAACSKTDTIWLKQHLQ 135 The following BLAST results are available for this feature:
BLAST of FC875475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 328
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875475 ID=FC875475; Name=FC875475; organism=Citrus clementina; type=EST; length=665bpback to top |