FC875475
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_PSESM (Aminomethyltransferase OS=Pseudomonas syringae pv. tomato GN=gcvT PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.677e-15 Identity = 47/131 (35.88%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 ++T L D H+A G KMV F GW MP+ Y + E R++ +FDVSHM + + G++ +L +L+ DV L PG + +E G IDD ++ D + LVVNA KDLA +++ + F Sbjct: 3 QRTPLFDLHLALGAKMVDFGGWDMPLHYGSQVEEHH-QVRRDCGVFDVSHMNVIDVLGREAKAWLRRLLANDVDKLKTPGRALYSAMLDEQAGVIDDMIVYLTADGY-RLVVNAATGAKDLAWMQSQLGDF 131
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_PSEPK (Aminomethyltransferase OS=Pseudomonas putida (strain KT2440) GN=gcvT PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.677e-15 Identity = 48/132 (36.36%), Postives = 71/132 (53.79%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFT 614 ++T L+D H+A G K V F GW MP+ Y S +E R + +FDVSHM + + G D +L++L+ DVA L PG + NE GG IDD ++ + + + LV NA R K L ++ F+ Sbjct: 3 QRTLLYDLHLALGAKTVDFGGWDMPLHY-GSQVEEHHQVRSDCGVFDVSHMTVIDVDGTDATVWLQRLLANDVARLDDPGKALYSPLLNEQGGVIDDLIVYRTETGY-RLVTNAATRAKVLDWLQLQRAGFS 132
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_LISW6 (Aminomethyltransferase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=gcvT PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.677e-15 Identity = 42/120 (35.00%), Postives = 62/120 (51.67%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKD 578 L KT +H + G K + F GW +P+Q+ E R + LFDVSHM + +KG D +L+ L+ D+ + G + ENGG++DD V+ K + LVVNA +KD Sbjct: 4 LLKTPIHPLYAKYGAKTIDFGGWDLPVQFAGIKAEHEA-VRTDAGLFDVSHMGEILVKGPDSTSYLQYLLSNDIEKIKIGKAQYNIMCYENGGTVDDLVVYKKSETEYILVVNAANTEKD 122
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_LISMO (Aminomethyltransferase OS=Listeria monocytogenes GN=gcvT PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.677e-15 Identity = 46/139 (33.09%), Postives = 69/139 (49.64%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVS 635 L KT +H + G K + F GW +P+Q+ E R + LFDVSHM + +KG D +L+ L+ D+ + G + E GG++DD V+ K + LVVNA DKD + +++ GDVS Sbjct: 4 LLKTPIHPLYAKYGAKTIDFGGWDLPVQFAGIKAEHEA-VRTDAGLFDVSHMGEILVKGPDSTSYLQYLLSNDIEKIKIGKAQYNIMCYETGGTVDDLVVYKKSETEYILVVNAANTDKDFEWMVKNIR------GDVS 135
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SHIF8 (Aminomethyltransferase OS=Shigella flexneri serotype 5b (strain 8401) GN=gcvT PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.133e-14 Identity = 48/131 (36.64%), Postives = 68/131 (51.91%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSF 611 ++T L++ H G +MV F W MP+ Y I E R + +FDVSHM + L+G FL L+ DVA L G + N +GG IDD ++ +D LVVN+ R+KDL+ I H + F Sbjct: 3 QQTPLYEQHTLCGARMVDFHSWMMPLHYGSQIDEHHA-VRTDAGMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPF 132
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SALG2 (Aminomethyltransferase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=gcvT PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.133e-14 Identity = 51/149 (34.23%), Postives = 75/149 (50.34%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLL 665 ++T L++ H G +MV F GW MP+ Y + E R + +FDVSHM + L G FL L+ DVA L G + N +GG IDD +I +D LVVN+ R+KDL+ I H + + + + D+ SL+ Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQLDEHHA-VRTDAGMFDVSHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIIYYFTEDFFRLVVNSATREKDLSWITQHAEPYA-----IDITVRDDLSLI 145
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SALEP (Aminomethyltransferase OS=Salmonella enteritidis PT4 (strain P125109) GN=gcvT PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.133e-14 Identity = 51/149 (34.23%), Postives = 75/149 (50.34%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLL 665 ++T L++ H G +MV F GW MP+ Y + E R + +FDVSHM + L G FL L+ DVA L G + N +GG IDD +I +D LVVN+ R+KDL+ I H + + + + D+ SL+ Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQLDEHHA-VRTDAGMFDVSHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIIYYFTEDFFRLVVNSATREKDLSWITQHAEPYA-----IDITVRDDLSLI 145
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_SALDC (Aminomethyltransferase OS=Salmonella dublin (strain CT_02021853) GN=gcvT PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.133e-14 Identity = 51/149 (34.23%), Postives = 75/149 (50.34%), Query Frame = 3 Query: 222 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLL 665 ++T L++ H G +MV F GW MP+ Y + E R + +FDVSHM + L G FL L+ DVA L G + N +GG IDD +I +D LVVN+ R+KDL+ I H + + + + D+ SL+ Sbjct: 3 QQTPLYEQHTLCGARMVDFHGWMMPLHYGSQLDEHHA-VRTDAGMFDVSHMTIVDLHGSRTREFLRYLLANDVAKLTKTGKALYSGMLNASGGVIDDLIIYYFTEDFFRLVVNSATREKDLSWITQHAEPYA-----IDITVRDDLSLI 145
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_PORGI (Aminomethyltransferase OS=Porphyromonas gingivalis GN=gcvT PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.133e-14 Identity = 45/122 (36.89%), Postives = 69/122 (56.56%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLA 584 +K T D H+A G KM FAG++MPI+Y I++ +N N +FDVSHM +KG + + FL+K+ D + LA G F N +GG +DD ++ + +++ +V NA KD A Sbjct: 1 MKTTPFTDVHIALGAKMHEFAGYNMPIEY-GGIIDEHMNVVNNVGVFDVSHMGEFWVKGPNALRFLQKVSSNDASKLAVGQVQYCCFPNNDGGIVDDFLLYRYEEEKYMMVPNAANIAKDWA 121
BLAST of FC875475 vs. ExPASy Swiss-Prot
Match: GCST_PORG3 (Aminomethyltransferase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=gcvT PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.133e-14 Identity = 45/122 (36.89%), Postives = 69/122 (56.56%), Query Frame = 3 Query: 219 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLA 584 +K T D H+A G KM FAG++MPI+Y I++ +N N +FDVSHM +KG + + FL+K+ D + LA G F N +GG +DD ++ + +++ +V NA KD A Sbjct: 1 MKTTPFTDVHIALGAKMHEFAGYNMPIEY-GGIIDEHMNVVNNVGVFDVSHMGEFWVKGPNALRFLQKVSSNDASKLAVGQVQYCCFPNNDGGIVDDFLLYRYEEEKYMMVPNAANIAKDWA 121 The following BLAST results are available for this feature:
BLAST of FC875475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 328
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875475 ID=FC875475; Name=FC875475; organism=Citrus clementina; type=EST; length=665bpback to top |