FC875481

Overview
NameFC875481
Unique NameFC875481
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_ACIB5 (Chaperone protein dnaK OS=Acinetobacter baumannii (strain AB0057) GN=dnaK PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.136e-62
Identity = 123/238 (51.68%), Postives = 169/238 (71.01%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS + + D E L+G +AK Q   NP NT+F  KRLIGRR+ D +VQ D+ L P+K+I        + VN    +K+ A ++IS+ +L KM++ AE YLG T+  AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA+A+G+DKK    G++ V ++DLGGGTFDVS++ I     +   EV +T GDT LGGEDFDN ++ + V+EFK+++  ++  +P AL+RL+ A
Sbjct:   34 RTTPSIIAYKDGEILVGQSAKRQAVTNPKNTLFAIKRLIGRRYEDQAVQKDIGLVPYKIIKADNGDAWVEVN----DKKLAPQQISAEILKKMKKTAEDYLGETVTEAVITVPAYFNDAQRQATKDAGKIAGLDVKRIINEPTAAALAFGMDKKE---GDRKVAVYDLGGGTFDVSIIEIADLDGDQQIEVLSTNGDTFLGGEDFDNALIEYLVEEFKKEQNVNLKNDPLALQRLKEA 264          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_ACIB3 (Chaperone protein dnaK OS=Acinetobacter baumannii (strain AB307-0294) GN=dnaK PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.136e-62
Identity = 123/238 (51.68%), Postives = 169/238 (71.01%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS + + D E L+G +AK Q   NP NT+F  KRLIGRR+ D +VQ D+ L P+K+I        + VN    +K+ A ++IS+ +L KM++ AE YLG T+  AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA+A+G+DKK    G++ V ++DLGGGTFDVS++ I     +   EV +T GDT LGGEDFDN ++ + V+EFK+++  ++  +P AL+RL+ A
Sbjct:   34 RTTPSIIAYKDGEILVGQSAKRQAVTNPKNTLFAIKRLIGRRYEDQAVQKDIGLVPYKIIKADNGDAWVEVN----DKKLAPQQISAEILKKMKKTAEDYLGETVTEAVITVPAYFNDAQRQATKDAGKIAGLDVKRIINEPTAAALAFGMDKKE---GDRKVAVYDLGGGTFDVSIIEIADLDGDQQIEVLSTNGDTFLGGEDFDNALIEYLVEEFKKEQNVNLKNDPLALQRLKEA 264          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_TREDE (Chaperone protein dnaK OS=Treponema denticola GN=dnaK PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.790e-62
Identity = 125/235 (53.19%), Postives = 167/235 (71.06%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS VGFT   ER++G  AKNQ+  NP  TV+  KR IG R+S+ +   ++K  P+K++    D     V    + K ++ +EIS+ +L KM++ AE YLG T+  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAA++A+G +K   S  EK + ++DLGGGTFD+S+L + +G+FEVK+T GDTHLGG+DFDNR+VN  V EFK+    D+S +  AL+RLR A
Sbjct:   34 RTTPSIVGFTSKDERVVGQPAKNQMITNPERTVYSVKRFIGHRYSELT--DELKRVPYKIVPQGED-----VRIDIDGKLYSTQEISAFILQKMKKTAEDYLGETVTEAVITVPAYFNDAQRQATKDAGKIAGLEVKRIINEPTAASLAFGFNK--DSKKEKTIAVYDLGGGTFDISILELGDGVFEVKSTNGDTHLGGDDFDNRIVNWLVDEFKKDTGIDLSKDRMALQRLREA 259          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_SPHWW (Chaperone protein dnaK OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=dnaK PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.790e-62
Identity = 125/235 (53.19%), Postives = 164/235 (69.79%), Query Frame = 1
Query:    1 RTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V F  D ERLIG  AK Q   NP NT+F  KRLIGRRF D   + D +L P+ ++ GP     +     GE+  ++  +IS+  L KM+E AE+YLG T+  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGL+K       K + ++DLGGGTFD+S+L I +G+FEVK+T GDT LGGEDFD ++V  F  +F++ +  D++ +  AL+RL+ A
Sbjct:   34 RTTPSIVAFAKDGERLIGQPAKRQAVTNPDNTIFAVKRLIGRRFDDPITRKDTELVPYHIVKGPNGDAWVQAG--GED--YSPSQISAFTLQKMKETAESYLGETVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLEKN----DGKTIAVYDLGGGTFDISILEIGDGVFEVKSTNGDTFLGGEDFDAKLVEFFAADFQKAEGIDLTKDRLALQRLKEA 260          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_PSEA6 (Chaperone protein dnaK OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=dnaK PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.790e-62
Identity = 131/239 (54.81%), Postives = 166/239 (69.46%), Query Frame = 1
Query:    1 RTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEG----IFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS + ++ D E L+G  AK Q   NP NT+F  KRLIGRRF D  VQ D+ + PF +I   AD     V  K E+   A  +IS+ VL KM++ AE YLG  +  AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAAA+AYG+DKK    G+  V ++DLGGGTFD+S++ I+E      FEV AT GDTHLGGEDFDN+++N+ V+EFK+    D+  +P A++RL+ A
Sbjct:   34 RTTPSIIAYSQDGETLVGQPAKRQAITNPKNTLFAIKRLIGRRFEDKEVQRDIDIMPFDIIK--ADNGDAWVQAKDEK--LAPPQISAEVLKKMKKTAEDYLGEEVTAAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYGMDKKK---GDSVVAVYDLGGGTFDISIIEIDEADGEHTFEVLATNGDTHLGGEDFDNQVINYLVEEFKKDSGMDLRKDPLAMQRLKEA 265          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_METEP (Chaperone protein dnaK OS=Methylobacterium extorquens (strain PA1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.790e-62
Identity = 125/235 (53.19%), Postives = 162/235 (68.94%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V FTD  ERL+G  AK Q   NP  T F  KRLIGR + D   Q D  L P+K+  G      +    + + K+++  +IS+  L KM+E AE++LG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK        + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFDNR+V +   EFK+++  D++ +  AL+RL+ A
Sbjct:   34 RTTPSIVAFTDDGERLVGQPAKRQAVTNPERTFFAIKRLIGRTYDDPLTQKDKGLVPYKIARGDNGDAWV----EADGKKYSPSQISAFTLQKMKETAESHLGQPVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKKAG----TIAVYDLGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDNRVVEYLTAEFKKEQGIDLTKDKLALQRLKEA 260          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_METC4 (Chaperone protein dnaK OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=dnaK PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.790e-62
Identity = 125/235 (53.19%), Postives = 162/235 (68.94%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V FTD  ERL+G  AK Q   NP  T F  KRLIGR + D   Q D  L P+K+  G      +    + + K+++  +IS+  L KM+E AE++LG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK        + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFDNR+V +   EFK+++  D++ +  AL+RL+ A
Sbjct:   34 RTTPSIVAFTDDGERLVGQPAKRQAVTNPERTFFAIKRLIGRTYDDPLTQKDKGLVPYKIARGDNGDAWV----EADGKKYSPSQISAFTLQKMKETAESHLGQPVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKKAG----TIAVYDLGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDNRVVEYLTAEFKKEQGIDLTKDKLALQRLKEA 260          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_COXBU (Chaperone protein dnaK OS=Coxiella burnetii GN=dnaK PE=1 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.790e-62
Identity = 129/240 (53.75%), Postives = 169/240 (70.42%), Query Frame = 1
Query:    1 RTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYK-GEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V +T D E L+G +AK Q   N   T++  KRLIGRRF D  VQ D+K+ P+K+I        + V  K G+ ++ A  +IS+ VLIKM++ AE YLG  +K+AV+TVPAYFNDSQRQATKDAG IAGLNV RIINEPTAAA+AYG+DKK    G++ + ++DLGGGTFD+S++ I     E  FEV AT GDT LGGEDFD R++++   EFK+ +  D+  +P AL+RL+ A
Sbjct:   34 RTTPSIVAYTKDGEVLVGASAKRQAVTNADRTLYAIKRLIGRRFDDNVVQKDIKMVPYKIIKADNGDAWVEVKDKEGKSQKLAPPQISAQVLIKMKKTAEDYLGHEVKDAVITVPAYFNDSQRQATKDAGKIAGLNVKRIINEPTAAALAYGMDKKK---GDRKIAVYDLGGGTFDISIIEIAEVDGEHQFEVLATNGDTFLGGEDFDLRLIDYLAGEFKKDEGVDLHNDPLALQRLKEA 270          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_COXBR (Chaperone protein dnaK OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=dnaK PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.790e-62
Identity = 129/240 (53.75%), Postives = 169/240 (70.42%), Query Frame = 1
Query:    1 RTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYK-GEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V +T D E L+G +AK Q   N   T++  KRLIGRRF D  VQ D+K+ P+K+I        + V  K G+ ++ A  +IS+ VLIKM++ AE YLG  +K+AV+TVPAYFNDSQRQATKDAG IAGLNV RIINEPTAAA+AYG+DKK    G++ + ++DLGGGTFD+S++ I     E  FEV AT GDT LGGEDFD R++++   EFK+ +  D+  +P AL+RL+ A
Sbjct:   34 RTTPSIVAYTKDGEVLVGASAKRQAVTNADRTLYAIKRLIGRRFDDNVVQKDIKMVPYKIIKADNGDAWVEVKDKEGKSQKLAPPQISAQVLIKMKKTAEDYLGHEVKDAVITVPAYFNDSQRQATKDAGKIAGLNVKRIINEPTAAALAYGMDKKK---GDRKIAVYDLGGGTFDISIIEIAEVDGEHQFEVLATNGDTFLGGEDFDLRLIDYLAGEFKKDEGVDLHNDPLALQRLKEA 270          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_COXBN (Chaperone protein dnaK OS=Coxiella burnetii (strain Dugway 5J108-111) GN=dnaK PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.790e-62
Identity = 129/240 (53.75%), Postives = 169/240 (70.42%), Query Frame = 1
Query:    1 RTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYK-GEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V +T D E L+G +AK Q   N   T++  KRLIGRRF D  VQ D+K+ P+K+I        + V  K G+ ++ A  +IS+ VLIKM++ AE YLG  +K+AV+TVPAYFNDSQRQATKDAG IAGLNV RIINEPTAAA+AYG+DKK    G++ + ++DLGGGTFD+S++ I     E  FEV AT GDT LGGEDFD R++++   EFK+ +  D+  +P AL+RL+ A
Sbjct:   34 RTTPSIVAYTKDGEVLVGASAKRQAVTNADRTLYAIKRLIGRRFDDNVVQKDIKMVPYKIIKADNGDAWVEVKDKEGKSQKLAPPQISAQVLIKMKKTAEDYLGHEVKDAVITVPAYFNDSQRQATKDAGKIAGLNVKRIINEPTAAALAYGMDKKK---GDRKIAVYDLGGGTFDISIIEIAEVDGEHQFEVLATNGDTFLGGEDFDLRLIDYLAGEFKKDEGVDLHNDPLALQRLKEA 270          
The following BLAST results are available for this feature:
BLAST of FC875481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_ACIB52.136e-6251.68Chaperone protein dnaK OS=Acinetobacter baumannii ... [more]
DNAK_ACIB32.136e-6251.68Chaperone protein dnaK OS=Acinetobacter baumannii ... [more]
DNAK_TREDE2.790e-6253.19Chaperone protein dnaK OS=Treponema denticola GN=d... [more]
DNAK_SPHWW2.790e-6253.19Chaperone protein dnaK OS=Sphingomonas wittichii (... [more]
DNAK_PSEA62.790e-6254.81Chaperone protein dnaK OS=Pseudoalteromonas atlant... [more]
DNAK_METEP2.790e-6253.19Chaperone protein dnaK OS=Methylobacterium extorqu... [more]
DNAK_METC42.790e-6253.19Chaperone protein dnaK OS=Methylobacterium chlorom... [more]
DNAK_COXBU2.790e-6253.75Chaperone protein dnaK OS=Coxiella burnetii GN=dna... [more]
DNAK_COXBR2.790e-6253.75Chaperone protein dnaK OS=Coxiella burnetii (strai... [more]
DNAK_COXBN2.790e-6253.75Chaperone protein dnaK OS=Coxiella burnetii (strai... [more]

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Properties
Property NameValue
Genbank descriptionC31404D09EF CTVClemen1 Citrus clementina cDNA clone C31404D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875481 ID=FC875481; Name=FC875481; organism=Citrus clementina; type=EST; length=703bp
AGGACGACGCCGTCTTATGTGGGGTTCACCGACACGGAGCGTTTGATCGG
GGACGCTGCTAAGAACCAGGTCGCCATGAACCCCACGAACACCGTCTTTG
ATGCAAAGAGGTTGATTGGTAGGAGATTCAGCGATGCATCAGTCCAAGGA
GATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACCAGCTGACAAGCC
CATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGG
AAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATTGCCGAGGCTTAC
CTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCCTGCTTACTTCAA
TGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCATTGCTGGGCTTA
ATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCCATTGCTTATGGC
CTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGTGTTGATCTTTGA
TTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTATTGAGGAGGGAA
TCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTTGGTGGTGAGGAT
TTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTTTAAGAGGAAGAA
ACAGAANGATATTAGTGGCAACCCTAGAGCTCTTAGGAGATTGAGGACTG
CTT
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