FC875481

Overview
NameFC875481
Unique NameFC875481
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_VIBVY (Chaperone protein dnaK OS=Vibrio vulnificus (strain YJ016) GN=dnaK PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.580e-65
Identity = 128/238 (53.78%), Postives = 171/238 (71.85%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS + +TD E L+G  AK Q   NP NT+F  KRLIGRRF D  VQ D+++ P+K++   AD     V  KG++   AA ++S+ VL KM++ AE +LG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK+    G++ + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFDNR++N+ V EFK+ +  D+  +P A++R++ A
Sbjct:   34 RTTPSVIAYTDGETLVGQPAKRQAVTNPENTLFAIKRLIGRRFEDEEVQRDIEIMPYKIVK--ADNGDAWVEAKGQK--MAAPQVSAEVLKKMKKTAEDFLGEEVTGAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKQG---GDRTIAVYDLGGGTFDISIIEIDEVEGEKTFEVLATNGDTHLGGEDFDNRLINYLVAEFKKDQGIDLKNDPLAMQRVKEA 264          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_VIBVU (Chaperone protein dnaK OS=Vibrio vulnificus GN=dnaK PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.580e-65
Identity = 128/238 (53.78%), Postives = 171/238 (71.85%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS + +TD E L+G  AK Q   NP NT+F  KRLIGRRF D  VQ D+++ P+K++   AD     V  KG++   AA ++S+ VL KM++ AE +LG  +  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK+    G++ + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFDNR++N+ V EFK+ +  D+  +P A++R++ A
Sbjct:   34 RTTPSVIAYTDGETLVGQPAKRQAVTNPENTLFAIKRLIGRRFEDEEVQRDIEIMPYKIVK--ADNGDAWVEAKGQK--MAAPQVSAEVLKKMKKTAEDFLGEEVTGAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKQG---GDRTIAVYDLGGGTFDISIIEIDEVEGEKTFEVLATNGDTHLGGEDFDNRLINYLVAEFKKDQGIDLKNDPLAMQRVKEA 264          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_GEOMG (Chaperone protein dnaK OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=dnaK PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.580e-65
Identity = 129/235 (54.89%), Postives = 172/235 (73.19%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V F ++ ERL+G  AK Q   NP NT+F  KRLIGR+F    V+ D+ + PFK++   AD     V+ +G  K ++  E+S++VL KM++ AE YLG T+ +AV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAA+AYGLDKK     ++ + +FDLGGGTFD+S+L + +G+FEVK+T GDT LGGEDFD R+++    EFK+ +  D+ G+  AL+RL+ A
Sbjct:   34 RTTPSMVAFAESGERLVGQQAKRQAVTNPENTLFAIKRLIGRKFDTDEVRKDISISPFKIVK--ADNGDAWVDVRG--KMYSPPEVSAIVLQKMKKTAEDYLGETVTDAVITVPAYFNDSQRQATKDAGKIAGLNVLRIINEPTAAALAYGLDKKK----DEKIAVFDLGGGTFDISILELGDGVFEVKSTNGDTFLGGEDFDQRVIDWIADEFKKDQGIDLRGDKMALQRLKEA 260          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_ERWCT (Chaperone protein dnaK OS=Erwinia carotovora subsp. atroseptica GN=dnaK PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.580e-65
Identity = 131/239 (54.81%), Postives = 170/239 (71.13%), Query Frame = 1
Query:    1 RTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS + +T D E L+G  AK Q   NP NT+F  KRLIGRRF D  VQ D  + P+K++A       + V    ++++ A  +IS+ VL KM++ AE YLG TI  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK+   VG + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFDNRM+N+ V EFK+++  D+  +P A++RL+ A
Sbjct:   34 RTTPSIIAYTQDGEILVGQPAKRQAVTNPQNTLFAIKRLIGRRFKDEEVQRDSNIMPYKIVAADNGDAWLEV----KDQKMAPPQISAEVLKKMKKTAEDYLGETITEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKE---VGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDNRMINYLVDEFKKEQGFDLRNDPLAMQRLKEA 265          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: HSP7M_SCHPO (Heat shock 70 kDa protein, mitochondrial OS=Schizosaccharomyces pombe GN=ssp1 PE=2 SV=2)

HSP 1 Score: 248.825 bits (634), Expect = 2.064e-65
Identity = 128/235 (54.47%), Postives = 165/235 (70.21%), Query Frame = 1
Query:    1 RTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V FT D ERL+G +AK Q  +NP NT F  KRLIGRRF +  VQ D+K  P+K++        +    +   K ++  +I   +L KMRE A  YLG  +KNAVVTVPAYFNDSQRQATK AG IAGLNV+R++NEPTAAA+AYGLDKK  ++    V +FDLGGGTFD+S+L +  G+FEV++T GDTHLGGEDFD  +V H V+ FK+ +  D+S +  A++R+R A
Sbjct:   82 RTTPSVVAFTKDGERLVGVSAKRQAVINPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGDAWL----EARGKTYSPSQIGGFILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKKNDAI----VAVFDLGGGTFDISILELNNGVFEVRSTNGDTHLGGEDFDVALVRHIVETFKKNEGLDLSKDRLAVQRIREA 308          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_PECCP (Chaperone protein dnaK OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.064e-65
Identity = 131/239 (54.81%), Postives = 170/239 (71.13%), Query Frame = 1
Query:    1 RTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS + +T D E L+G  AK Q   NP NT+F  KRLIGRRF D  VQ D  + P+K+IA       + V    ++++ A  +IS+ VL KM++ AE YLG TI  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK+   VG + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD+RM+N+ V EFK+++  D+  +P A++RL+ A
Sbjct:   34 RTTPSIIAYTQDGETLVGQPAKRQAVTNPKNTLFAIKRLIGRRFKDEEVQRDANIMPYKIIAADNGDAWLEV----KDQKMAPPQISAEVLKKMKKTAEDYLGETISEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKE---VGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRMINYLVDEFKKEQGFDLRNDPLAMQRLKEA 265          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_SHEAM (Chaperone protein dnaK OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=dnaK PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.521e-65
Identity = 130/238 (54.62%), Postives = 169/238 (71.01%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS + FT+ E L+G  AK Q   NPTNT F  KRLIGRRF D  VQ D+ + PFK+I   AD     V  +G  K+ A  ++S+ VL KM++ AE +LG  +  AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA+AYG+DKK    G+  V ++DLGGGTFD+S++ I+    +  FEV AT GDTHLGGEDFDNR++N+   EFK+++  D+  +P A++RL+ A
Sbjct:   34 RTTPSIIAFTEDETLVGQPAKRQAVTNPTNTFFAIKRLIGRRFKDDEVQRDVNIMPFKIIQ--ADNGDAWVESRG--KKMAPPQVSAEVLKKMKKTAEDFLGEEVTEAVITVPAYFNDAQRQATKDAGRIAGLDVKRIINEPTAAALAYGIDKKQ---GDNIVAVYDLGGGTFDISIIEIDNNDGDQTFEVLATNGDTHLGGEDFDNRLINYLADEFKKEQGLDLRNDPLAMQRLKEA 264          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK1_VIBF1 (Chaperone protein dnaK 1 OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=dnaK1 PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.521e-65
Identity = 129/238 (54.20%), Postives = 171/238 (71.85%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTT S + +TD E L+G  AK Q   NP NT+F  KRLIGRRF D  VQ D+++ P+K+I   AD     V  KG++   AA ++S+ +L KM++ AE +LG  +  AVVTVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA+AYGLDKK    G++ + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFDNR++N  V EFK+++  D+  +P A++R++ A
Sbjct:   34 RTTASVIAYTDGETLVGQPAKRQAITNPQNTLFAIKRLIGRRFEDEEVQRDIEIMPYKIIK--ADNGDAWVEAKGQK--MAAPQVSAEILKKMKKTAEDFLGEEVTGAVVTVPAYFNDAQRQATKDAGRIAGLDVKRIINEPTAAALAYGLDKKG---GDRTIAVYDLGGGTFDISIIEIDNVDGEQTFEVLATNGDTHLGGEDFDNRLINFLVDEFKKEQGFDLKNDPLAMQRVKEA 264          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: GRP75_CHICK (Stress-70 protein, mitochondrial OS=Gallus gallus GN=HSPA9 PE=1 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 4.598e-65
Identity = 128/235 (54.47%), Postives = 168/235 (71.49%), Query Frame = 1
Query:    1 RTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V FT D ERL+G  AK Q   NP NT +  KRLIGRRF D+ V+ D+K  PFK++        +    +   K ++  +I + VL+KM+E AE YLG   KNAV+TVPAYFNDSQRQATKDAG I+GLNV+R+INEPTAAA+AYGLDK      +K + ++DLGGGTFD+S+L I++G+FEVK+T GDT LGGEDFD  ++ + V+EFKR+   D++ +  AL+R+R A
Sbjct:   87 RTTPSVVAFTADGERLVGMPAKRQAVTNPHNTFYATKRLIGRRFDDSEVKKDIKNVPFKIVRASNGDAWV----EAHGKLYSPSQIGAFVLMKMKETAENYLGHPAKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKSE----DKIIAVYDLGGGTFDISILEIQKGVFEVKSTNGDTFLGGEDFDQALLQYIVKEFKRETSVDLTKDNMALQRVREA 313          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_SHEPA (Chaperone protein dnaK OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 4.598e-65
Identity = 131/238 (55.04%), Postives = 169/238 (71.01%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS + +T  E L+G +AK Q   NPTNTVF  KRLIGRRF D  VQ D+ + PFK+I+  AD     V  +G  ++ A  +IS+ +L KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAAA+AYG+DKK    G+  V ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFDNRM+ +   EFK+++  D+  +P A++RL+ A
Sbjct:   34 RTTPSIIAYTADETLVGQSAKRQAVTNPTNTVFAIKRLIGRRFKDDEVQRDVDIMPFKIIS--ADNGDAWVEAQG--RKMAPPQISAEILKKMKKTAEDFLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYGIDKKQ---GDNIVAVYDLGGGTFDISIIEIDSVDGEQTFEVLATNGDTHLGGEDFDNRMIKYLADEFKKEQGLDLRNDPLAMQRLKEA 264          
The following BLAST results are available for this feature:
BLAST of FC875481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_VIBVY1.580e-6553.78Chaperone protein dnaK OS=Vibrio vulnificus (strai... [more]
DNAK_VIBVU1.580e-6553.78Chaperone protein dnaK OS=Vibrio vulnificus GN=dna... [more]
DNAK_GEOMG1.580e-6554.89Chaperone protein dnaK OS=Geobacter metallireducen... [more]
DNAK_ERWCT1.580e-6554.81Chaperone protein dnaK OS=Erwinia carotovora subsp... [more]
HSP7M_SCHPO2.064e-6554.47Heat shock 70 kDa protein, mitochondrial OS=Schizo... [more]
DNAK_PECCP2.064e-6554.81Chaperone protein dnaK OS=Pectobacterium carotovor... [more]
DNAK_SHEAM3.521e-6554.62Chaperone protein dnaK OS=Shewanella amazonensis (... [more]
DNAK1_VIBF13.521e-6554.20Chaperone protein dnaK 1 OS=Vibrio fischeri (strai... [more]
GRP75_CHICK4.598e-6554.47Stress-70 protein, mitochondrial OS=Gallus gallus ... [more]
DNAK_SHEPA4.598e-6555.04Chaperone protein dnaK OS=Shewanella pealeana (str... [more]

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Properties
Property NameValue
Genbank descriptionC31404D09EF CTVClemen1 Citrus clementina cDNA clone C31404D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875481 ID=FC875481; Name=FC875481; organism=Citrus clementina; type=EST; length=703bp
AGGACGACGCCGTCTTATGTGGGGTTCACCGACACGGAGCGTTTGATCGG
GGACGCTGCTAAGAACCAGGTCGCCATGAACCCCACGAACACCGTCTTTG
ATGCAAAGAGGTTGATTGGTAGGAGATTCAGCGATGCATCAGTCCAAGGA
GATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACCAGCTGACAAGCC
CATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGG
AAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATTGCCGAGGCTTAC
CTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCCTGCTTACTTCAA
TGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCATTGCTGGGCTTA
ATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCCATTGCTTATGGC
CTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGTGTTGATCTTTGA
TTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTATTGAGGAGGGAA
TCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTTGGTGGTGAGGAT
TTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTTTAAGAGGAAGAA
ACAGAANGATATTAGTGGCAACCCTAGAGCTCTTAGGAGATTGAGGACTG
CTT
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