FC875481
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_SHELP (Chaperone protein dnaK OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=dnaK PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 6.005e-65 Identity = 127/238 (53.36%), Postives = 165/238 (69.33%), Query Frame = 1 Query: 1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702 RTTPS + +T E L+G AK Q NP NT F KRLIGRRF D VQ D+ + PFK+IA + + +K+ A ++S+ +L KM++ AE YLG + AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAAA+AYG+DKK G+ V ++DLGGGTFD+S++ I+ E FEV AT GDTHLGGEDFDNR++N+ EFK+++ D+ +P A++RL+ A Sbjct: 34 RTTPSIIAYTGEEVLVGQPAKRQAVTNPKNTFFAIKRLIGRRFKDDEVQRDVDIMPFKIIAADNGDAWV----EAHDKKMAPPQVSAEILKKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYGIDKKQ---GDNIVAVYDLGGGTFDISIIEIDSVDGEQTFEVLATNGDTHLGGEDFDNRLINYLADEFKKEQSLDLRNDPLAMQRLKEA 264
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_GEOSF (Chaperone protein dnaK OS=Geobacter sp. (strain FRC-32) GN=dnaK PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 6.005e-65 Identity = 129/235 (54.89%), Postives = 171/235 (72.77%), Query Frame = 1 Query: 1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702 RTTPS V TD+ ERL+G AK Q NP NT+F KRLIGR+F +V+ D+ + PFK++ AD V +G++ ++ EIS+MVL KM++ AE YLG T+ +AV+TVPAYF+DSQRQATKDAG IAGLNV+RIINEPTAAA+AYGLDKK ++ + +FDLGGGTFD+S+L + EG+FEVK+T GDT LGGEDFD +++ EFK+ + D+ + AL+RL+ A Sbjct: 34 RTTPSMVAITDSGERLVGQQAKRQAVTNPENTLFAIKRLIGRKFESEAVKKDIAISPFKIVK--ADNADAWVEVRGQK--YSPPEISAMVLQKMKKTAEDYLGETVTDAVITVPAYFDDSQRQATKDAGKIAGLNVLRIINEPTAAALAYGLDKKK----DEKIAVFDLGGGTFDISILELGEGVFEVKSTNGDTFLGGEDFDQNVIDWIADEFKKDQGIDLRNDKMALQRLKEA 260
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_AGRVS (Chaperone protein dnaK OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=dnaK PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 6.005e-65 Identity = 129/235 (54.89%), Postives = 167/235 (71.06%), Query Frame = 1 Query: 1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702 RTTPS V F+D ERL+G AK Q NPTNT+F KRLIGRR+ D +V+ D L PF +I G + KG ++ +IS+M+L KM+E AEAYLG ++ AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDK K + ++DLGGGTFD+S+L I +G+FEVK+T GDT LGGEDFD R+V + EFK+++ ++ + AL+RL+ A Sbjct: 34 RTTPSMVAFSDDGERLVGQPAKRQAVTNPTNTLFAVKRLIGRRYEDPTVEKDKGLVPFPIIKGDNGDAWVEAQGKG----YSPAQISAMILQKMKETAEAYLGEKVEKAVITVPAYFNDAQRQATKDAGRIAGLEVLRIINEPTAAALAYGLDK----TEGKTIAVYDLGGGTFDISVLEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLAAEFKKEQGIELKNDKLALQRLKEA 260
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK2_VIBF1 (Chaperone protein dnaK 2 OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=dnaK2 PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 6.005e-65 Identity = 128/238 (53.78%), Postives = 172/238 (72.27%), Query Frame = 1 Query: 1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702 RTT S + +TD E L+G AK Q NP NT+F KRLIGRRF D VQ D+++ PFK++ AD V KG++ AA ++S+ VL KM++ AE +LG + AVVTVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA+AYGLDKK G++ + ++DLGGGTFD+S++ I+ E FEV AT GDTHLGGEDFDNR++N+ V EF++++ ++ +P A++R++ A Sbjct: 34 RTTASVIAYTDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFEDEEVQRDIEIMPFKIVK--ADNGDAWVEAKGQK--MAAPQVSAEVLKKMKKTAEDFLGEEVTGAVVTVPAYFNDAQRQATKDAGRIAGLDVKRIINEPTAAALAYGLDKKG---GDRTIAVYDLGGGTFDISIIEIDNVDGEQTFEVLATNGDTHLGGEDFDNRLINYLVSEFEKEQGINLKNDPLAMQRVKEA 264
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_SINMW (Chaperone protein dnaK OS=Sinorhizobium medicae (strain WSM419) GN=dnaK PE=2 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 7.843e-65 Identity = 126/235 (53.62%), Postives = 167/235 (71.06%), Query Frame = 1 Query: 1 RTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702 RTTPS V FT D ERL+G AK Q NP NT+F KRLIGR F D + Q D + P+K++ + + +K ++ +IS+M+L KM+E AE+YLG ++ AV+TVPAYFND+QRQATKDAG IAGL+V+RIINEPTAAA+AYGLDKK K + ++DLGGGTFD+S+L I +G+FEVK+T GDT LGGEDFD R+V + EFK+++ D+ + AL+RL+ A Sbjct: 34 RTTPSMVAFTEDGERLVGQPAKRQAVTNPENTLFAIKRLIGRTFEDPTTQKDKGMVPYKIVKADNGDAWV----EAHDKSYSPSQISAMILQKMKETAESYLGEKVEKAVITVPAYFNDAQRQATKDAGKIAGLDVLRIINEPTAAALAYGLDKKE----GKTIAVYDLGGGTFDISVLEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLASEFKKEQGIDLKNDKLALQRLKEA 260
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_SHISS (Chaperone protein dnaK OS=Shigella sonnei (strain Ss046) GN=dnaK PE=2 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 7.843e-65 Identity = 132/239 (55.23%), Postives = 169/239 (70.71%), Query Frame = 1 Query: 1 RTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702 RTTPS + +T D E L+G AK Q NP NT+F KRLIGRRF D VQ D+ + PFK+IA AD V KG++ A +IS+ VL KM++ AE YLG + AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK G + + ++DLGGGTFD+S++ I+ E FEV AT GDTHLGGEDFD+R++N+ V+EFK+ + D+ +P A++RL+ A Sbjct: 34 RTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIA--ADNGDAWVEVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDK---GTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEA 265
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_SHIFL (Chaperone protein dnaK OS=Shigella flexneri GN=dnaK PE=2 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 7.843e-65 Identity = 132/239 (55.23%), Postives = 169/239 (70.71%), Query Frame = 1 Query: 1 RTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702 RTTPS + +T D E L+G AK Q NP NT+F KRLIGRRF D VQ D+ + PFK+IA AD V KG++ A +IS+ VL KM++ AE YLG + AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK G + + ++DLGGGTFD+S++ I+ E FEV AT GDTHLGGEDFD+R++N+ V+EFK+ + D+ +P A++RL+ A Sbjct: 34 RTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIA--ADNGDAWVEVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDK---GTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEA 265
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_SHIF8 (Chaperone protein dnaK OS=Shigella flexneri serotype 5b (strain 8401) GN=dnaK PE=2 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 7.843e-65 Identity = 132/239 (55.23%), Postives = 169/239 (70.71%), Query Frame = 1 Query: 1 RTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702 RTTPS + +T D E L+G AK Q NP NT+F KRLIGRRF D VQ D+ + PFK+IA AD V KG++ A +IS+ VL KM++ AE YLG + AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK G + + ++DLGGGTFD+S++ I+ E FEV AT GDTHLGGEDFD+R++N+ V+EFK+ + D+ +P A++RL+ A Sbjct: 34 RTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIA--ADNGDAWVEVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDK---GTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEA 265
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_SHIDS (Chaperone protein dnaK OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=dnaK PE=2 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 7.843e-65 Identity = 132/239 (55.23%), Postives = 169/239 (70.71%), Query Frame = 1 Query: 1 RTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702 RTTPS + +T D E L+G AK Q NP NT+F KRLIGRRF D VQ D+ + PFK+IA AD V KG++ A +IS+ VL KM++ AE YLG + AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK G + + ++DLGGGTFD+S++ I+ E FEV AT GDTHLGGEDFD+R++N+ V+EFK+ + D+ +P A++RL+ A Sbjct: 34 RTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIA--ADNGDAWVEVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDK---GTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEA 265
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_SHIBS (Chaperone protein dnaK OS=Shigella boydii serotype 4 (strain Sb227) GN=dnaK PE=2 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 7.843e-65 Identity = 132/239 (55.23%), Postives = 169/239 (70.71%), Query Frame = 1 Query: 1 RTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702 RTTPS + +T D E L+G AK Q NP NT+F KRLIGRRF D VQ D+ + PFK+IA AD V KG++ A +IS+ VL KM++ AE YLG + AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYGLDK G + + ++DLGGGTFD+S++ I+ E FEV AT GDTHLGGEDFD+R++N+ V+EFK+ + D+ +P A++RL+ A Sbjct: 34 RTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIA--ADNGDAWVEVKGQK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDK---GTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEA 265 The following BLAST results are available for this feature:
BLAST of FC875481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875481 ID=FC875481; Name=FC875481; organism=Citrus clementina; type=EST; length=703bpback to top |