FC875481

Overview
NameFC875481
Unique NameFC875481
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10212 contig Ccv1_Contig10212:223..925. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_EHRSE (Chaperone protein dnaK OS=Ehrlichia sennetsu GN=dnaK PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.304e-63
Identity = 124/235 (52.77%), Postives = 165/235 (70.21%), Query Frame = 1
Query:    1 RTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V FT D + L+G  A+ Q   N  NT+  +KRLIGRRF D  ++G  K +P+K++        I    +   K ++  ++ + VLIK++E AE Y G  +  AV+TVPAYF+D+QR ATKDAG IAGL V+RIINEPTAAA+AYGLDK AT+   KN+ +FDLGGGTFDVS+L + +G+FEVKAT GDTHLGGEDFD  ++N  V+EFK++   D+  +P AL+RL+ A
Sbjct:   32 RTTPSVVAFTSDGQTLVGAPAQRQAVTNAKNTIVASKRLIGRRFKDNVIKGIQKDYPYKIVEAKNGDAWI----EAGGKSYSPSQVGANVLIKLKEAAETYTGKKVTKAVITVPAYFDDAQRTATKDAGRIAGLEVLRIINEPTAAALAYGLDKTATT---KNIAVFDLGGGTFDVSILELGDGVFEVKATNGDTHLGGEDFDRMILNFLVEEFKKENGMDLKNDPLALQRLKEA 259          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_DESVM (Chaperone protein dnaK OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=dnaK PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.304e-63
Identity = 122/234 (52.14%), Postives = 166/234 (70.94%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V FTD ERL+GD AK Q   NP  TVF  KRL+GR+     V       P++++AG      + V    + +Q++A E+S+M+L K++  AEAYLG T+ +AV+TVPAYFND+QRQATKDAG IAGL+V RIINEPTAA++AYG D+K      + + +FDLGGGTFD+S+L + + + EV+AT GDT LGGEDFD R++N+ V+EF+R+   D+S +  AL+RL+ A
Sbjct:   34 RTTPSIVAFTDKERLVGDIAKRQAVTNPERTVFAVKRLMGRKGDAPEVNNWKTHSPYRIVAGANGDAAVEV----QGRQYSAAEVSAMILGKLKADAEAYLGETVTDAVITVPAYFNDAQRQATKDAGRIAGLDVKRIINEPTAASLAYGFDRKT----NEKIAVFDLGGGTFDISILEVGDNVVEVRATNGDTFLGGEDFDQRVINYLVEEFRRENGVDLSKDRMALQRLKEA 259          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_BEII9 (Chaperone protein dnaK OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=dnaK PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.304e-63
Identity = 126/235 (53.62%), Postives = 161/235 (68.51%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V FTD  ERL+G  AK Q   NP  T F  KRLIGR F D   + D+ L P+K+   P     +    + + K ++  +IS+ +L KM+E AE+YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK    G   + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R+V +   EFK++   D+  +  AL+RL+ A
Sbjct:   34 RTTPSIVAFTDDGERLVGQPAKRQGVTNPERTFFAIKRLIGRTFEDPMTKKDIGLVPYKITKAPNGDAWV----EADGKPYSPSQISAFILQKMKETAESYLGQPVSQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKK----GSGTIAVYDLGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDTRLVEYLADEFKKENGIDLKKDKLALQRLKEA 260          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_SHEWM (Chaperone protein dnaK OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=dnaK PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 5.621e-63
Identity = 123/238 (51.68%), Postives = 164/238 (68.91%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS + +T  E L+G  AK Q   NPTNT F  KRLIGRRF D  VQ D+ + PFK+I        +    +  +K+ A  ++S+ +L KM++ AE +LG  +  AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAAA+AYG+DKK    G+  V ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFDNR++ +   EF++++  ++  +P A++RL+ A
Sbjct:   34 RTTPSIIAYTGEETLVGQPAKRQAVTNPTNTFFAIKRLIGRRFKDDEVQRDVDIMPFKIIGADNGDAWV----EAHDKKMAPPQVSAEILKKMKKTAEDFLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYGIDKKQ---GDNIVAVYDLGGGTFDISIIEIDSVDGEQTFEVLATNGDTHLGGEDFDNRLIKYLADEFEKEQGMNLRNDPLAMQRLKEA 264          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_RICPU (Chaperone protein dnaK OS=Rickettsia peacockii (strain Rustic) GN=dnaK PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 5.621e-63
Identity = 118/234 (50.43%), Postives = 163/234 (69.66%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS + F + E+L+G +AK Q   N  NT++  KRLIGR F D  V+ D  + P+ ++        +    + +  +++  +IS+ +L KM+E AE YLG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYG +K A+    K + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R++NH +  FK++   D+S +P AL+RL+ A
Sbjct:   34 RTTPSIIAFANGEKLVGQSAKRQAVTNHRNTIYAVKRLIGRNFIDPMVKKDQGIVPYNIVKADNGDAWV----EADNNKYSPSQISAFILQKMKETAENYLGDKVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGFEKSAS----KTIAVYDLGGGTFDVSILEIADGVFEVKSTNGDTFLGGEDFDTRILNHLIDVFKKENGIDLSNDPLALQRLKEA 259          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_WOLWR (Chaperone protein dnaK OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=dnaK PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 7.341e-63
Identity = 125/235 (53.19%), Postives = 166/235 (70.64%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V  T + ERLIG  AK Q   N +NT F  KRLIGR++SD  ++      P+KV A  +    +      + K+++  +I + +L  M+E AEAYLG  +K+AV+TVPAYFNDSQRQATKDAG IAGLNV+RI+NEPTAAA+AYGLDKK        ++++DLGGGTFDVS+L I +G+FEVKAT GDTHLGGEDFDN +V++ + EFK+    D+  +P A++R++ A
Sbjct:   34 RTTPSIVALTSSGERLIGAPAKRQATTNASNTFFATKRLIGRQYSDPEMKNLSV--PYKVFAAKSGDAWVKTT---DNKEYSPSQIGAFILQNMKEAAEAYLGEEVKDAVITVPAYFNDSQRQATKDAGKIAGLNVLRIVNEPTAAALAYGLDKK----HGHTIVVYDLGGGTFDVSILEIGDGVFEVKATNGDTHLGGEDFDNGVVSYLLDEFKKSNGIDLKNDPMAMQRIKEA 259          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_WOLPM (Chaperone protein dnaK OS=Wolbachia pipientis wMel GN=dnaK PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 7.341e-63
Identity = 125/235 (53.19%), Postives = 166/235 (70.64%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V  T + ERLIG  AK Q   N +NT F  KRLIGR++SD  ++      P+KV A  +    +      + K+++  +I + +L  M+E AEAYLG  +K+AV+TVPAYFNDSQRQATKDAG IAGLNV+RI+NEPTAAA+AYGLDKK        ++++DLGGGTFDVS+L I +G+FEVKAT GDTHLGGEDFDN +V++ + EFK+    D+  +P A++R++ A
Sbjct:   34 RTTPSIVALTSSGERLIGAPAKRQATTNASNTFFATKRLIGRQYSDPEMKNLSV--PYKVFAAKSGDAWVKTT---DNKEYSPSQIGAFILQNMKEAAEAYLGEEVKDAVITVPAYFNDSQRQATKDAGKIAGLNVLRIVNEPTAAALAYGLDKK----HGHTIVVYDLGGGTFDVSILEIGDGVFEVKATNGDTHLGGEDFDNGVVSYLLDEFKKSNGIDLKNDPMAMQRIKEA 259          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_THERP (Chaperone protein dnaK OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=dnaK PE=2 SV=2)

HSP 1 Score: 240.35 bits (612), Expect = 7.341e-63
Identity = 126/235 (53.62%), Postives = 165/235 (70.21%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            R TPS V  T T ERL+G  AK Q   NP NT++  KR +GRRF D  VQ  +KL P++V          GV  K  ++ +  +EIS+M+L K+++ AEAYLG T+  AV+TVPAYF+DSQR ATKDAG IAGL V+RIINEPTA+A+AYGLDKK    GE+ V ++DLGGGT+D+S+L I EG+F+V AT GDTHLGG+DFD R+++    EFKR+   D+  +  AL+RL+ A
Sbjct:   34 RLTPSVVAITPTGERLVGRFAKRQAITNPENTIYSIKRFMGRRFDDPEVQRTIKLVPYQVRRAQNG----GVEVKMGDRWYTPQEISAMILQKLKQDAEAYLGETVDKAVITVPAYFDDSQRNATKDAGRIAGLEVLRIINEPTASALAYGLDKK----GEEKVAVYDLGGGTYDISILDISEGVFQVLATNGDTHLGGDDFDQRIIDWLCDEFKRETGIDLRQDRMALQRLKEA 260          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_GLUDA (Chaperone protein dnaK OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=dnaK PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 7.341e-63
Identity = 124/235 (52.77%), Postives = 164/235 (69.79%), Query Frame = 1
Query:    1 RTTPSYVGFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V F D  E L+G +AK Q   NP NT++  KRLIGRR+ D +V  D  L P+ ++AG      +    + + K++A  +I++ VL KM+E AEAYLG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGL KK        + ++DLGGGTFDVS+L I +G+ EVK+T GDT LGGEDFD R++++   EFKR++  D+  +  AL+RL+ A
Sbjct:   34 RTTPSMVAFADNGEMLVGQSAKRQAVTNPANTLYAVKRLIGRRYDDPTVTKDKALVPYSIVAGDNGDAWV----EAQGKKYAPSQIAAFVLGKMKETAEAYLGEPVSQAVITVPAYFNDAQRQATKDAGRIAGLEVLRIINEPTAAALAYGLQKK----NGGTIAVYDLGGGTFDVSILEISDGVIEVKSTNGDTFLGGEDFDARVISYLADEFKREQGIDLRADKLALQRLKEA 260          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_CAUSK (Chaperone protein dnaK OS=Caulobacter sp. (strain K31) GN=dnaK PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 7.341e-63
Identity = 124/233 (53.22%), Postives = 164/233 (70.39%), Query Frame = 1
Query:    1 RTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLR 696
            RTTPS V F  D ERL+G  AK Q   NPTNT+F  KRLIGR F+D  V  D  + P++++ GP     +    K   K ++ +E+S+ +L KM+E AE++LG  +  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGL+        K + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R+V++   EFK+++  D+  +  AL+RLR
Sbjct:   34 RTTPSVVAFLEDGERLVGQPAKRQAVTNPTNTLFAIKRLIGRNFADPVVAKDKAMVPYEIVKGPTGDAWV----KAHGKDYSPQEVSAFILQKMKEAAESHLGEPVTKAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLEMNE----GKKIAVYDLGGGTFDVSVLEIGDGVFEVKSTNGDTFLGGEDFDLRIVDYLADEFKKEQGVDLRKDKLALQRLR 258          
The following BLAST results are available for this feature:
BLAST of FC875481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_EHRSE4.304e-6352.77Chaperone protein dnaK OS=Ehrlichia sennetsu GN=dn... [more]
DNAK_DESVM4.304e-6352.14Chaperone protein dnaK OS=Desulfovibrio vulgaris (... [more]
DNAK_BEII94.304e-6353.62Chaperone protein dnaK OS=Beijerinckia indica subs... [more]
DNAK_SHEWM5.621e-6351.68Chaperone protein dnaK OS=Shewanella woodyi (strai... [more]
DNAK_RICPU5.621e-6350.43Chaperone protein dnaK OS=Rickettsia peacockii (st... [more]
DNAK_WOLWR7.341e-6353.19Chaperone protein dnaK OS=Wolbachia sp. subsp. Dro... [more]
DNAK_WOLPM7.341e-6353.19Chaperone protein dnaK OS=Wolbachia pipientis wMel... [more]
DNAK_THERP7.341e-6353.62Chaperone protein dnaK OS=Thermomicrobium roseum (... [more]
DNAK_GLUDA7.341e-6352.77Chaperone protein dnaK OS=Gluconacetobacter diazot... [more]
DNAK_CAUSK7.341e-6353.22Chaperone protein dnaK OS=Caulobacter sp. (strain ... [more]

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Properties
Property NameValue
Genbank descriptionC31404D09EF CTVClemen1 Citrus clementina cDNA clone C31404D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875481 ID=FC875481; Name=FC875481; organism=Citrus clementina; type=EST; length=703bp
AGGACGACGCCGTCTTATGTGGGGTTCACCGACACGGAGCGTTTGATCGG
GGACGCTGCTAAGAACCAGGTCGCCATGAACCCCACGAACACCGTCTTTG
ATGCAAAGAGGTTGATTGGTAGGAGATTCAGCGATGCATCAGTCCAAGGA
GATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACCAGCTGACAAGCC
CATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGG
AAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATTGCCGAGGCTTAC
CTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCCTGCTTACTTCAA
TGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCATTGCTGGGCTTA
ATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCCATTGCTTATGGC
CTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGTGTTGATCTTTGA
TTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTATTGAGGAGGGAA
TCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTTGGTGGTGAGGAT
TTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTTTAAGAGGAAGAA
ACAGAANGATATTAGTGGCAACCCTAGAGCTCTTAGGAGATTGAGGACTG
CTT
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