FC875487
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875487 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.653e-26 Identity = 71/190 (37.37%), Postives = 99/190 (52.11%), Query Frame = 3 Query: 150 HLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAK*RQL------------LDPTAVHGVTKFSDLTPSEFRRQ----FLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE 671 +L +E +F F +++K+Y +E+ YR+ VFK NL + + L +A GV KFSD TP E FL L++ L + + P LP +DWRD VT +KDQG CGSCW+F A G +E + + +L+ LSEQQL+DCD D GCNGGLM+ AF+ Sbjct: 49 NLDQSEIYFKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNKFSDKTPDEVLHSNTGFFLNLSQHYTL-CENRIVKGAPDIRLPDYYDWRDTNKVTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCD---------EVDLGCNGGLMHLAFQ 228
BLAST of FC875487 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.653e-26 Identity = 71/177 (40.11%), Postives = 95/177 (53.67%), Query Frame = 3 Query: 165 EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAK*RQLLDPTAVH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND---LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 674 +HH+ L+K + Q E D R +++ NL+ L +H G+ D+TP E +G LR+P ++ L ++ LP DWR+ G VT VK QG+CGSCW+FSA GALEG L TG+LVSLS Q LVDC E E+ G + GC GG M AF+Y Sbjct: 23 DHHWDLWKKTRMRRNTDQNEEDVRRLIWEKNLKFIMLHNLEHSMGMHSYSVGMNHMGDMTPEEV----IGYMGSLRIPRPWNRSGTLKSSSNQTLPDSVDWREKGCVTNVKYQGSCGSCWAFSAEGALEGQLKLKTGKLVSLSAQNLVDCSTE---EKYG--NKGCGGGFMTEAFQY 190
BLAST of FC875487 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.383e-26 Identity = 66/159 (41.51%), Postives = 92/159 (57.86%), Query Frame = 3 Query: 222 EHDYRFRVFKANLRRAK*RQLLDPTAVH--GVTKFSDLTPSEFRRQFLGLN----RRLRLPADAQK--APILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 674 + D RF +FK NLR + A + G+T F++LT E+R +LG RR+ + + + +++P DWR GAV +KDQG CGSCW+FS A+EG + + TGELVSLSEQ+LVDCD S + GCNGGLM+ AF++ Sbjct: 24 QQDERFNIFKDNLRFIDLHNENNKNATYKLGLTIFANLTNDEYRSLYLGARTEPVRRITKAKNVNMKYSAAVNVDEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGELVSLSEQELVDCDK--------SYNQGCNGGLMDYAFQF 174
BLAST of FC875487 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.259e-25 Identity = 69/158 (43.67%), Postives = 91/158 (57.59%), Query Frame = 3 Query: 222 EHDYRFRVFKANLR--RAK*RQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAP-----ILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 674 E RF FK+N + ++ P +H + +F D+ +EFR F+G RR PA P L +DLP DWR GAVTGVKDQG CGSCW+FS ++EG + + TG LVSLSEQ+L+DCD + + GC GGLM++AFEY Sbjct: 61 EKHRRFGTFKSNAHFIHSHNKRGDHPYRLH-LNRFGDMDQAEFRATFVGDLRR-DTPAKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCD--------TADNDGCQGGLMDNAFEY 208
BLAST of FC875487 vs. ExPASy Swiss-Prot
Match: CATV_NPVMC (Viral cathepsin OS=Mamestra configurata nucleopolyhedrovirus GN=VCATH PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.259e-25 Identity = 61/179 (34.08%), Postives = 100/179 (55.87%), Query Frame = 3 Query: 159 NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAK*RQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPT--------NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE 671 +A +F F S+++K Y++++E YR+ +F+ N+ + + +AV+ + +F+D+T +E +NR L + A T P +FDWR++ VT VKDQG CG+CW+F+ GALE + + L+ L+EQQLVDCD D GC+GGL+++A+E Sbjct: 35 SAPLYFEKFISQYNKQYSSEDEKKYRYNIFRHNIESINAKNSRNDSAVYKINRFADMTKNEV------VNRHTGLASGDIGANFCETIVVDGPGQRQRPANFDWRNYNKVTSVKDQGMCGACWAFAGLGALESQYAIKYDRLIDLAEQQLVDCDF---------VDMGCDGGLIHTAYE 198
BLAST of FC875487 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.259e-25 Identity = 71/180 (39.44%), Postives = 96/180 (53.33%), Query Frame = 3 Query: 147 DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAK*RQLLDPTAVHGVTK----FSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 674 D LNA+ + +K+ + Y EE +R V++ N++ + HG T F D+T EFR+ G + + P+ ++P DWR+ G VT VK+QG CGSCW+FSATGALEG F TG+LVSLSEQ LVDC + GCNGGLM++AF Y Sbjct: 22 DQSLNAQWY--QWKATHRRLYGMNEE-GWRRAVWEKNMKMIELHNREYSQGKHGFTMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKMFQEPLFA--EIPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR-------AQGNEGCNGGLMDNAFRY 189
BLAST of FC875487 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.645e-25 Identity = 70/177 (39.55%), Postives = 97/177 (54.80%), Query Frame = 3 Query: 165 EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAK*RQLLDPTAVH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND---LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 674 +HH++L+K +SK Y + E R +++ NL+ L +H G+ D+T E + L LR+P+ Q+ +N LP DWR+ G VT VK QG+CG+CW+FSA GALE L TG+LVSLS Q LVD C E+ G + GCNGG M +AF+Y Sbjct: 25 DHHWNLWKKTYSKQYKEENEEVARRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTGEEV----ISLMGSLRVPSQWQRNVTYRSNSNQKLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVD----CSTEKYG--NKGCNGGFMTTAFQY 191
BLAST of FC875487 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.148e-25 Identity = 66/171 (38.60%), Postives = 95/171 (55.56%), Query Frame = 3 Query: 162 AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAK*RQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 674 A + F +K++++K Y++Q+EHD RF FKA + + + G+ ++DL+ EF R + +P+ DWR+ VT VKDQG CGSCW+F +TG+LEG + ++ GELVSLSEQQLVDC +GS GC GG +SAF+Y Sbjct: 221 ASNLFKEYKAQYNKEYSSQDEHDERFINFKAARKIIATHNAKESSYKLGMNHYADLSNKEFNTLVKPKVARPSVTGADSVHDDESLRSIPSTVDWRNQNCVTPVKDQGICGSCWTFGSTGSLEGTNCVTNGELVSLSEQQLVDC-----AILTGS--QGCGGGFASSAFQY 384
BLAST of FC875487 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3) HSP 1 Score: 115.546 bits (288), Expect = 2.805e-25 Identity = 71/187 (37.97%), Postives = 95/187 (50.80%), Query Frame = 3 Query: 141 SEDHLLNAEHHFSLFKS---KFSKTYATQEEHDYRFRVFKANLRRAK*RQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPI------LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 674 S+D L + E LF S K +K Y +E YRF +FK NL+ R + G+ +FSDL+ EF+ +++G LP D P DLP DWR GAVT VK QG C SCW+FS +EG + + TG LV LSEQ+LVDCD + GCN G +++ +Y Sbjct: 34 SQDDLTSTERLIQLFNSWMLKHNKNYKNVDEKLYRFEIFKDNLKYIDERNKMINGYWLGLNEFSDLSNDEFKEKYVG-----SLPEDYTNQPYDEEFVNEDIVDLPESVDWRAKGAVTPVKHQGYCESCWAFSTVATVEGINKIKTGNLVELSEQELVDCDKQ---------SYGCNRGYQSTSLQY 206
BLAST of FC875487 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.805e-25 Identity = 68/158 (43.04%), Postives = 91/158 (57.59%), Query Frame = 3 Query: 222 EHDYRFRVFKANLR--RAK*RQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAP-----ILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 674 E RF FK+N + ++ P +H + +F D+ +EFR F+G RR P+ P L +DLP DWR GAVTGVKDQG CGSCW+FS ++EG + + TG LVSLSEQ+L+DCD + + GC GGLM++AFEY Sbjct: 61 EKHRRFGTFKSNAHFIHSHNKRGDHPYRLH-LNRFGDMDQAEFRATFVGDLRR-DTPSKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCD--------TADNDGCQGGLMDNAFEY 208 The following BLAST results are available for this feature:
BLAST of FC875487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 149
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875487 ID=FC875487; Name=FC875487; organism=Citrus clementina; type=EST; length=721bpback to top |