FC875510

Overview
NameFC875510
Unique NameFC875510
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length666
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:5..670. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC875510 vs. ExPASy Swiss-Prot
Match: SAHH_MYCTA (Adenosylhomocysteinase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=ahcY PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 7.278e-46
Identity = 95/181 (52.49%), Postives = 119/181 (65.75%), Query Frame = 2 
Query:  152 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW-GPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 664
            +G +FK+ DLS ADFGR E+ +AE EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFSTQDH                       WKGETL+EYWW  E+ L W  P    ++I+DDGGDAT+L+  G++    YEK G +P     D AE+++ L +
Sbjct:   17 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPDEPKGVPVFAWKGETLEEYWWAAEQMLTWPDPDKPANMILDDGGDATMLVLRGMQ----YEKAGVVPPAEEDDPAEWKVFLNL 193
[Close]
BLAST of FC875510 vs. ExPASy Swiss-Prot
Match: SAHH_MYCBT (Adenosylhomocysteinase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=ahcY PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 7.278e-46
Identity = 95/181 (52.49%), Postives = 119/181 (65.75%), Query Frame = 2 
Query:  152 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW-GPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 664
            +G +FK+ DLS ADFGR E+ +AE EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFSTQDH                       WKGETL+EYWW  E+ L W  P    ++I+DDGGDAT+L+  G++    YEK G +P     D AE+++ L +
Sbjct:   17 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPDEPKGVPVFAWKGETLEEYWWAAEQMLTWPDPDKPANMILDDGGDATMLVLRGMQ----YEKAGVVPPAEEDDPAEWKVFLNL 193
[Close]
BLAST of FC875510 vs. ExPASy Swiss-Prot
Match: SAHH_MYCBP (Adenosylhomocysteinase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=ahcY PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 7.278e-46
Identity = 95/181 (52.49%), Postives = 119/181 (65.75%), Query Frame = 2 
Query:  152 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW-GPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 664
            +G +FK+ DLS ADFGR E+ +AE EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFSTQDH                       WKGETL+EYWW  E+ L W  P    ++I+DDGGDAT+L+  G++    YEK G +P     D AE+++ L +
Sbjct:   17 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPDEPKGVPVFAWKGETLEEYWWAAEQMLTWPDPDKPANMILDDGGDATMLVLRGMQ----YEKAGVVPPAEEDDPAEWKVFLNL 193
[Close]
BLAST of FC875510 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSS (Adenosylhomocysteinase OS=Mycobacterium sp. (strain MCS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 9.505e-46
Identity = 95/183 (51.91%), Postives = 120/183 (65.57%), Query Frame = 2 
Query:  143 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 664
            +S +G ++KV DLS A+FGR EI LAE EMPGLMA R E+    P KGA+I+GSLHMT+QTAVLIETL +LGAEVRW SCNIFSTQDH                       WKGETL+EYWW  E+ L W PG   ++I+DDGGDAT+L+  G +    +EK G +P     D+AE+++ L +
Sbjct:   11 ESRNGIDYKVADLSLAEFGRKEIRLAEHEMPGLMALRREYAEVAPLKGARISGSLHMTVQTAVLIETLVSLGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPKGTPVFAWKGETLEEYWWAAEQMLTW-PGEPANMILDDGGDATMLVLRGAQ----FEKAGVVPPAEDDDSAEYKVFLNL 188
[Close]
BLAST of FC875510 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSK (Adenosylhomocysteinase OS=Mycobacterium sp. (strain KMS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 9.505e-46
Identity = 95/183 (51.91%), Postives = 120/183 (65.57%), Query Frame = 2 
Query:  143 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 664
            +S +G ++KV DLS A+FGR EI LAE EMPGLMA R E+    P KGA+I+GSLHMT+QTAVLIETL +LGAEVRW SCNIFSTQDH                       WKGETL+EYWW  E+ L W PG   ++I+DDGGDAT+L+  G +    +EK G +P     D+AE+++ L +
Sbjct:   11 ESRNGIDYKVADLSLAEFGRKEIRLAEHEMPGLMALRREYAEVAPLKGARISGSLHMTVQTAVLIETLVSLGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPKGTPVFAWKGETLEEYWWAAEQMLTW-PGEPANMILDDGGDATMLVLRGAQ----FEKAGVVPPAEDDDSAEYKVFLNL 188
[Close]
BLAST of FC875510 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSJ (Adenosylhomocysteinase OS=Mycobacterium sp. (strain JLS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 9.505e-46
Identity = 95/183 (51.91%), Postives = 120/183 (65.57%), Query Frame = 2 
Query:  143 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 664
            +S +G ++KV DLS A+FGR EI LAE EMPGLMA R E+    P KGA+I+GSLHMT+QTAVLIETL +LGAEVRW SCNIFSTQDH                       WKGETL+EYWW  E+ L W PG   ++I+DDGGDAT+L+  G +    +EK G +P     D+AE+++ L +
Sbjct:   11 ESRNGIDYKVADLSLAEFGRKEIRLAEHEMPGLMALRREYAEVAPLKGARISGSLHMTVQTAVLIETLVSLGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPKGTPVFAWKGETLEEYWWAAEQMLTW-PGEPANMILDDGGDATMLVLRGAQ----FEKAGVVPPAEDDDSAEYKVFLNL 188
[Close]
BLAST of FC875510 vs. ExPASy Swiss-Prot
Match: SAHH_CHLTE (Adenosylhomocysteinase OS=Chlorobium tepidum GN=ahcY PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 9.505e-46
Identity = 91/155 (58.71%), Postives = 107/155 (69.03%), Query Frame = 2 
Query:  161 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPA 625
            ++KV D+S A++GR EIE+AE EMPGLMA R ++   +P  GA+I GSLHMTIQTAVLIETL  LGA+VRW SCNIFSTQDH              WKGETL EYWWCT + L++  G GP+LIVDDGGDATL+IH G K E       K P  A
Sbjct:    9 DYKVADISLAEWGRKEIEIAEKEMPGLMATRKKYEGKKPLAGARIAGSLHMTIQTAVLIETLVELGADVRWASCNIFSTQDHAAAAIAAAGVPVFAWKGETLDEYWWCTRQILEFEGGLGPNLIVDDGGDATLMIHFGYKIENDPSMLDKTPGNA 163
[Close]
BLAST of FC875510 vs. ExPASy Swiss-Prot
Match: SAHH_CHLPD (Adenosylhomocysteinase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=ahcY PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 9.505e-46
Identity = 88/141 (62.41%), Postives = 103/141 (73.05%), Query Frame = 2 
Query:  164 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAE 586
            +KV D+S A++GR EI++AE EMPGLMA R ++   +P KGA+I GSLHMTIQTAVLIETL  LGA+VRW SCNIFSTQDH              WKGETL EYWWCT + L++  G GP LIVDDGGDATL+IH G K E
Sbjct:   10 YKVADMSLAEWGRKEIDIAEKEMPGLMATRKKYAGQKPLKGARIAGSLHMTIQTAVLIETLVELGADVRWASCNIFSTQDHAAAAIAKAGIPVFAWKGETLDEYWWCTRQILEFEGGKGPHLIVDDGGDATLMIHLGYKIE 150
[Close]
BLAST of FC875510 vs. ExPASy Swiss-Prot
Match: SAHH_CHLP8 (Adenosylhomocysteinase OS=Chlorobaculum parvum (strain NCIB 8327) GN=ahcY PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 9.505e-46
Identity = 91/155 (58.71%), Postives = 107/155 (69.03%), Query Frame = 2 
Query:  161 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPA 625
            ++KV D+S A++GR EIE+AE EMPGLMA R ++   +P  GA+I GSLHMTIQTAVLIETL  LGA+VRW SCNIFSTQDH              WKGETL EYWWCT + L++  G GP+LIVDDGGDATL+IH G K E       K P  A
Sbjct:    9 DYKVADISLAEWGRKEIEIAEKEMPGLMATRKKYEGKKPLAGARIAGSLHMTIQTAVLIETLVELGADVRWASCNIFSTQDHAAAAIAAAGVPVFAWKGETLDEYWWCTRQILEFEGGLGPNLIVDDGGDATLMIHLGYKIENDPSMLDKTPGNA 163
[Close]
BLAST of FC875510 vs. ExPASy Swiss-Prot
Match: SAHH_PELCD (Adenosylhomocysteinase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.241e-45
Identity = 96/164 (58.54%), Postives = 115/164 (70.12%), Query Frame = 2 
Query:  164 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIV 655
            + VKD+  A++GR EI +AE EMPGLMA R E+  ++P  GA+ITGSLHMTIQTAVLIETL  LGA++RW SCNI+STQDH              +KGETL+EYW  T KAL +    GP LIVDDGGDATLLIH GV+ E  Y +TGK+P+  S DN E  IV
Sbjct:   10 YVVKDMGLAEWGRREIRMAEAEMPGLMAIREEYRGTKPLAGARITGSLHMTIQTAVLIETLAELGADLRWASCNIYSTQDHAAAAIAATGVPVFAYKGETLEEYWEYTFKALAYEE--GPQLIVDDGGDATLLIHRGVERERAYARTGKVPE-ISHDNKELSIV 170
The following BLAST results are available for this feature:
BLAST of FC875510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_MYCTA7.278e-4652.49Adenosylhomocysteinase OS=Mycobacterium tuberculos... [more]
SAHH_MYCBT7.278e-4652.49Adenosylhomocysteinase OS=Mycobacterium bovis (str... [more]
SAHH_MYCBP7.278e-4652.49Adenosylhomocysteinase OS=Mycobacterium bovis (str... [more]
SAHH_MYCSS9.505e-4651.91Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]
SAHH_MYCSK9.505e-4651.91Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]
SAHH_MYCSJ9.505e-4651.91Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]
SAHH_CHLTE9.505e-4658.71Adenosylhomocysteinase OS=Chlorobium tepidum GN=ah... [more]
SAHH_CHLPD9.505e-4662.41Adenosylhomocysteinase OS=Chlorobium phaeobacteroi... [more]
SAHH_CHLP89.505e-4658.71Adenosylhomocysteinase OS=Chlorobaculum parvum (st... [more]
SAHH_PELCD1.241e-4558.54Adenosylhomocysteinase OS=Pelobacter carbinolicus ... [more]

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Properties
Property NameValue
Genbank descriptionC31404G02EF CTVClemen1 Citrus clementina cDNA clone C31404G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875510 ID=FC875510; Name=FC875510; organism=Citrus clementina; type=EST; length=666bp
GCTCACCCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTTGG
TTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCTTTTAG
ATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCCGC
TAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGGCC
GCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTTGC
CGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACCGG
TTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCACCG
CTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCCAA
GACCACGCGGCCGCCGCCATCGCACGTGACTCCGCCTCCGTCTTTGCCTG
GAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACGGAGAAAGCCCTGG
ACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCGATGACGGTGGTGAC
GCCACGTTGTTGATCCACGAGGGAGTCAAAGCTGAGGAGATCTACGAGAA
GACCGGGAAGTTGCCCGACCCGGCCTCCACCGACAACGCCGAGTTTCAGA
TTGTTTTGACTATCAT
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