FC875520
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875520 vs. ExPASy Swiss-Prot
Match: EXB11_MAIZE (Expansin-B11 OS=Zea mays GN=EXPB11 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.241e-24 Identity = 55/162 (33.95%), Postives = 96/162 (59.26%), Query Frame = 1 Query: 151 SSGACGYGSLALS-FNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHS--NQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVW 627 + G CGY + + FN VP ++KDG GCG+CF+++C P CSGK V +TD+N+ F ++ AF A++ +G+ + + K G++D++++RV C+Y + +E+ PNYLA+ V Y G ++VA+D+ + GS + + ++GA+W Sbjct: 68 NGGGCGYKDVNKAPFNSMGACGNVP-IFKDGLGCGSCFEIKCDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY-GSKVTFHLEKGC-NPNYLALLVKYVDGDGDIVAVDIKEKGSDTYEPLKHSWGAIW 226
BLAST of FC875520 vs. ExPASy Swiss-Prot
Match: MPAP1_PHAAQ (Major pollen allergen Pha a 1 OS=Phalaris aquatica PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.059e-23 Identity = 51/161 (31.68%), Postives = 89/161 (55.28%), Query Frame = 1 Query: 151 SSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTD--FVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVW 627 + GACGY + + G G ++KDG GCG+CF+++C P CSG+ V +TD N F +S AF +++ +G+ +++ G ++++++RV C+Y + E PNYLA+ V Y G ++VA+D+ + G W + ++GA+W Sbjct: 66 NGGACGYKDVDKAPFNGMTGCGNTPIFKDGRGCGSCFELKCSKPESCSGEPITVHITDDNEEPIAPYHFDLSGHAFGSMAKKGEEENVRGAGELELQFRRVKCKYPDGTKPTFHVEKGSNPNYLALLVKYVDGDGDVVAVDIKEKGKDKWIELKESWGAIW 226
BLAST of FC875520 vs. ExPASy Swiss-Prot
Match: MPAH1_HOLLA (Major pollen allergen Hol l 1 OS=Holcus lanatus PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.512e-23 Identity = 53/161 (32.92%), Postives = 87/161 (54.04%), Query Frame = 1 Query: 151 SSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTD--FVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVW 627 + GACGY + G G ++KDG GCG+CF+++C P CSG+ V +TD N F +S AF +++ +G+ Q + G ++++++RV C+Y + E PNYLA+ V Y G ++VA+D+ + G W + ++GAVW Sbjct: 62 NGGACGYKDVDKPPFSGMTGCGNTPIFKDGRGCGSCFEIKCTKPESCSGEPVTVHITDDNEEPIAPYHFDLSGHAFGSMAKKGEEQKLRSAGELELKFRRVKCKYPDGTKPTFHVEKGSNPNYLALLVKYIDGDGDVVAVDIKEKGKDKWIELKESWGAVW 222
BLAST of FC875520 vs. ExPASy Swiss-Prot
Match: EXPB9_MAIZE (Expansin-B9 OS=Zea mays GN=EXPB9 PE=1 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 3.512e-23 Identity = 58/171 (33.92%), Postives = 92/171 (53.80%), Query Frame = 1 Query: 151 SSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTD--FVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVW--DTSRVPMG 651 + GACG ++ L G A G ++KDG GCG+C+++RCK CSG V +TD+N+ F +S +AF +L+ G + G++DVE++RV C+Y V E PNY+AV V + ++V M++ S+ W M ++GA+W DT++ G Sbjct: 62 NGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYVAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKG 232
BLAST of FC875520 vs. ExPASy Swiss-Prot
Match: EXB10_MAIZE (Expansin-B10 OS=Zea mays GN=EXPB10 PE=1 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 3.512e-23 Identity = 55/162 (33.95%), Postives = 96/162 (59.26%), Query Frame = 1 Query: 151 SSGACGYGSLALS-FNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHS--NQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVW 627 + G CGY + FN +P ++KDG GCG+CF+++C P CSGK V +TD+N+ F ++ AF A++ +G+ + + K G++D++++RV C+Y + + +E+ PNYLA+ V Y G ++VA+DV + GS + + ++GA+W Sbjct: 69 NGGGCGYKDVNKPPFNSMGACGNIP-IFKDGLGCGSCFEIKCDKPVECSGKPVVVHITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY-DSKVTFHLEKGC-GPNYLALLVKYVDGDGDIVAVDVKEKGSDTYEPLKHSWGAIW 227
BLAST of FC875520 vs. ExPASy Swiss-Prot
Match: MPAP1_PHLPR (Pollen allergen Phl p 1 OS=Phleum pratense GN=PHLPI PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.022e-22 Identity = 52/161 (32.30%), Postives = 84/161 (52.17%), Query Frame = 1 Query: 151 SSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTD--FVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVW 627 + GACGY + G G ++K G GCG+CF+++C P CSG+ V +TD N F +S AF A++ +G Q + G ++++++RV C+Y E PNYLA+ V Y G ++VA+D+ + G W + ++GA+W Sbjct: 60 NGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKPEACSGEPVVVHITDDNEEPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGSNPNYLALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIW 220
BLAST of FC875520 vs. ExPASy Swiss-Prot
Match: EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.334e-22 Identity = 55/163 (33.74%), Postives = 92/163 (56.44%), Query Frame = 1 Query: 157 GACGYGS-LALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTD-----LNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVW 627 GACGY + + +AAG PSLYK G GCGAC++++C CSG+ V++TD + + F +S + A++ G + G++ V+Y+RVPC+Y N+A RV++ + P Y V + ++ G ++ A+D+ + G W M +N+GA+W Sbjct: 83 GACGYQTAVGQRPFSSMIAAGSPSLYKGGKGCGACYEVKCTTNAACSGQPATVVITDECPGGICLAGAAHFDMSGTSMGAMAKPGMADKLRAAGILQVQYRRVPCKYSGVNIAFRVDQGA-NPFYFEVLIEFEDGDGDLNAVDLMEAG-CGWTPMVQNWGALW 243
BLAST of FC875520 vs. ExPASy Swiss-Prot
Match: EXPB7_ORYSJ (Expansin-B7 OS=Oryza sativa subsp. japonica GN=EXPB7 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.973e-22 Identity = 53/171 (30.99%), Postives = 93/171 (54.39%), Query Frame = 1 Query: 151 SSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNH--SNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSN----------WGYMSRNYGAVW 627 + GACG+ ++ L + G L+KDG GCG+C+Q+RC CSG VI+TD+N+ + F +S AF A++ + ++ G++D++++RVPC+Y + VE+ S P Y+A+ V Y+ G ++V +D+ + S W M ++G++W Sbjct: 111 NGGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQIRCVGHPACSGLPETVIITDMNYYPVSLYHFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRRVPCQYPGLTVTFHVEQGS-NPVYMAILVEYENGDGDVVQVDLMESRYSTGGVDGTPTGVWTPMRESWGSIW 280
BLAST of FC875520 vs. ExPASy Swiss-Prot
Match: EXB17_ORYSJ (Expansin-B17 OS=Oryza sativa subsp. japonica GN=EXPB17 PE=3 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.927e-21 Identity = 59/178 (33.15%), Postives = 95/178 (53.37%), Query Frame = 1 Query: 133 SQASALSSGACGYGSLA-LSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTD-----LNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPM 648 ++ + GACGYGSL + + + P L+KDG GCGAC++++C + +CS + VI+TD L +T F +S AF ++ G G + G + V Y+R C+Y +N+A RV E S +L++ V ++ GQ ++ +M + Q S W M +GA W R P+ Sbjct: 59 AEGDGSTGGACGYGSLVDVVPMKARVGSVSPVLFKDGEGCGACYKVKCLDHGICSRRAVTVIVTDECPGGLCAFGRTHFDLSGAAFSRMAVAGAGGHLRDRGQLSVVYRRTACKYGGKNIAFRVNEGSTN-FWLSLLVEFEDGQGDIGSMQIKQANSVEWLDMKHVWGATWCLVRGPL 235
BLAST of FC875520 vs. ExPASy Swiss-Prot
Match: EXPB1_ARATH (Expansin-B1 OS=Arabidopsis thaliana GN=EXPB1 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.293e-21 Identity = 56/172 (32.56%), Postives = 92/172 (53.49%), Query Frame = 1 Query: 133 SQASALSSGACGYGSLA-LSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHS------NQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVW 627 ++ S GACGYGSL + + A P L+K G GCGAC+++RC + T+CS + +I TD + S T F +S AF ++ G I G++++ Y+R C+Y+ +N+A V S +L++ + Y+ G+ ++ +M + Q GS W M +GA W Sbjct: 51 AEGDGSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEGCGACYKVRCLDKTICSKRAVTIIATDQSPSGPSAKAKHTHFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKYRGKNIAFHVNAGS-TDYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISMKHIWGANW 221 The following BLAST results are available for this feature:
BLAST of FC875520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875520 ID=FC875520; Name=FC875520; organism=Citrus clementina; type=EST; length=728bpback to top |