FC875547
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_BACC3 (ATP synthase subunit delta OS=Bacillus cereus (strain 03BB102) GN=atpH PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.169e-12 Identity = 45/141 (31.91%), Postives = 72/141 (51.06%), Query Frame = 3 Query: 270 VATSYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVM 689 VA YA+AL +AK + LE ++ ++ ++ + ++H F P I E+K+ + + S + L N L ILID KR+D++ DI E+ + N+ N A V S L E IA+ K TG +R+K V+ Sbjct: 6 VAKRYAVALFKIAKEKHVLEMFEEELRLVQNVYEKNGELHSFLTQPNISKEQKKTFLANVFGSVSESIL--NTLYILIDNKRIDILSDIANEYVVLANEERNVADATVYSTRLLSEEEKLNIAEAFAKRTGKDAIRVKNVV 144
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_BACC0 (ATP synthase subunit delta OS=Bacillus cereus (strain AH820) GN=atpH PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.169e-12 Identity = 45/141 (31.91%), Postives = 72/141 (51.06%), Query Frame = 3 Query: 270 VATSYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVM 689 VA YA+AL +AK + LE ++ ++ ++ + ++H F P I E+K+ + + S + L N L ILID KR+D++ DI E+ + N+ N A V S L E IA+ K TG +R+K V+ Sbjct: 6 VAKRYAVALFKIAKEKHVLEMFEEELRLVQNVYEKNGELHSFLTQPNISKEQKKTFLANVFGSVSESIL--NTLYILIDNKRIDILSDIANEYVVLANEERNVADATVYSTRLLSEEEKLNIAEAFAKRTGKDAIRVKNVV 144
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_BACAN (ATP synthase subunit delta OS=Bacillus anthracis GN=atpH PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.169e-12 Identity = 45/141 (31.91%), Postives = 72/141 (51.06%), Query Frame = 3 Query: 270 VATSYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVM 689 VA YA+AL +AK + LE ++ ++ ++ + ++H F P I E+K+ + + S + L N L ILID KR+D++ DI E+ + N+ N A V S L E IA+ K TG +R+K V+ Sbjct: 6 VAKRYAVALFKIAKEKHVLEMFEEELRLVQNVYEKNGELHSFLTQPNISKEQKKTFLANVFGSVSESIL--NTLYILIDNKRIDILSDIANEYVVLANEERNVADATVYSTRLLSEEEKLNIAEAFAKRTGKDAIRVKNVV 144
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_BACAH (ATP synthase subunit delta OS=Bacillus thuringiensis (strain Al Hakam) GN=atpH PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.169e-12 Identity = 45/141 (31.91%), Postives = 72/141 (51.06%), Query Frame = 3 Query: 270 VATSYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVM 689 VA YA+AL +AK + LE ++ ++ ++ + ++H F P I E+K+ + + S + L N L ILID KR+D++ DI E+ + N+ N A V S L E IA+ K TG +R+K V+ Sbjct: 6 VAKRYAVALFKIAKEKHVLEMFEEELRLVQNVYEKNGELHSFLTQPNISKEQKKTFLANVFGSVSESIL--NTLYILIDNKRIDILSDIANEYVVLANEERNVADATVYSTRLLSEEEKLNIAEAFAKRTGKDAIRVKNVV 144
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_BACAC (ATP synthase subunit delta OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=atpH PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.169e-12 Identity = 45/141 (31.91%), Postives = 72/141 (51.06%), Query Frame = 3 Query: 270 VATSYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVM 689 VA YA+AL +AK + LE ++ ++ ++ + ++H F P I E+K+ + + S + L N L ILID KR+D++ DI E+ + N+ N A V S L E IA+ K TG +R+K V+ Sbjct: 6 VAKRYAVALFKIAKEKHVLEMFEEELRLVQNVYEKNGELHSFLTQPNISKEQKKTFLANVFGSVSESIL--NTLYILIDNKRIDILSDIANEYVVLANEERNVADATVYSTRLLSEEEKLNIAEAFAKRTGKDAIRVKNVV 144
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_BACAA (ATP synthase subunit delta OS=Bacillus anthracis (strain A0248) GN=atpH PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.169e-12 Identity = 45/141 (31.91%), Postives = 72/141 (51.06%), Query Frame = 3 Query: 270 VATSYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVM 689 VA YA+AL +AK + LE ++ ++ ++ + ++H F P I E+K+ + + S + L N L ILID KR+D++ DI E+ + N+ N A V S L E IA+ K TG +R+K V+ Sbjct: 6 VAKRYAVALFKIAKEKHVLEMFEEELRLVQNVYEKNGELHSFLTQPNISKEQKKTFLANVFGSVSESIL--NTLYILIDNKRIDILSDIANEYVVLANEERNVADATVYSTRLLSEEEKLNIAEAFAKRTGKDAIRVKNVV 144
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_NOSP7 (ATP synthase subunit delta OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=atpH PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.441e-12 Identity = 42/142 (29.58%), Postives = 75/142 (52.82%), Query Frame = 3 Query: 261 SATVATSYAIALVDLAKANNTLESTSADVEKIEKIF-SEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKT 683 +A VA YA AL+ +A++ N E D + ++KQ+H FF NP I E K+ ++ +I + P NFL IL+D +R+ ++ I +++ + ++ T +A V S V L I ++V ++ A+ V ++T Sbjct: 7 AAEVAQPYAQALLSIAQSKNLTEEFGEDARTFLGLLRADKQLHNFFSNPFIQAENKKALIKQILGEGS-NPYLRNFLLILVDKRRIAFLESIFQQYLALLRQLNQTVLAEVISAVPLTEAQQQAIIQKVIAISNARQVELET 147
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_BACC2 (ATP synthase subunit delta OS=Bacillus cereus (strain G9842) GN=atpH PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.441e-12 Identity = 44/141 (31.21%), Postives = 73/141 (51.77%), Query Frame = 3 Query: 270 VATSYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVM 689 VA YA+AL +AK + LE ++ ++ ++ + ++H F P I E+K+ + + S + L N L ILID KR+D++ +I E+ + N+ N A V S+ L E IA+ K TG +R+K V+ Sbjct: 6 VAKRYAVALFKIAKEKHVLEMFEEELRLVQNVYVKNGELHSFLTQPNISKEQKKTFLANVFGSVSESIL--NTLYILIDNKRIDILPEIADEYVVLANEERNVADATVYSIRLLSEEEKLNIAEAFAKRTGKDAIRVKNVV 144
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_SYNP2 (ATP synthase subunit delta OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=atpH PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.801e-12 Identity = 44/144 (30.56%), Postives = 77/144 (53.47%), Query Frame = 3 Query: 249 GIRMSATVATSYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRI 677 G M A V YA AL+ LA+ N +E+ + + + +F E + F +NP + E K+ ++ +C + NFL +L+D +R+ ++ I +EF + K+ N +A V+S L ++ A IA QV+++TGA V + Sbjct: 3 GNTMIAQVVEPYAGALMTLAQETNKVEAFAENCRALLSLFQESAEFRSFVMNPLVKAEDKKGVLQGVCGQD-VDTYFLNFLFLLVDRRRIVFLEGICQEFVALQRKLNNIVLADVTSAQPLTTDQEAAIADQVKQMTGANAVEL 145
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_GALSU (ATP synthase subunit delta, chloroplastic OS=Galdieria sulphuraria GN=atpD PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12 Identity = 39/138 (28.26%), Postives = 77/138 (55.80%), Query Frame = 3 Query: 270 VATSYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIK 680 +A YA L ++A N+L + + I+ + + + + F VNP I + K+ + +I ++ L +T NFL ILI+ +R+ DIV +F ++NK TNT + ++SV+ L + + +++++T A +++K Sbjct: 7 IAKVYAEGLFEIANTKNSLAEINEQLNSIKSVLKQMPEFYYFLVNPLISQQIKKNTI-KIVFNNNLDKITLNFLLILIERRRIIYFYDIVDQFILIWNKATNTSVVEIASVISLTEKQQQYLINKLKEITKANYIKLK 143 The following BLAST results are available for this feature:
BLAST of FC875547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875547 ID=FC875547; Name=FC875547; organism=Citrus clementina; type=EST; length=699bpback to top |