FC875547
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_BACCR (ATP synthase subunit delta OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=atpH PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12 Identity = 44/141 (31.21%), Postives = 72/141 (51.06%), Query Frame = 3 Query: 270 VATSYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVM 689 VA YA+AL +AK + LE ++ ++ ++ + ++H F P I E+K+ + + S + L N L ILID KR+D++ +I E+ + N+ N A V S L E IA+ K TG +R+K V+ Sbjct: 6 VAKRYAVALFKIAKEKHVLEMFEEELRLVQNVYVKNGELHSFLTQPNISKEQKKTFLANVFGSVSESIL--NTLYILIDNKRIDILPEIADEYVVLANEERNVADATVYSTRLLSEEEKLNIAEAFAKRTGKDAIRVKNVV 144
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_BACCQ (ATP synthase subunit delta OS=Bacillus cereus (strain Q1) GN=atpH PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12 Identity = 44/141 (31.21%), Postives = 72/141 (51.06%), Query Frame = 3 Query: 270 VATSYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVM 689 VA YA+AL +AK + LE ++ ++ ++ + ++H F P I E+K+ + + S + L N L ILID KR+D++ +I E+ + N+ N A V S L E IA+ K TG +R+K V+ Sbjct: 6 VAKRYAVALFKIAKEKHVLEMFEEELRLVQNVYVKNGELHSFLTQPNISKEQKKTFLANVFGSVSESIL--NTLYILIDNKRIDILPEIADEYVVLANEERNVADATVYSTRLLSEEEKLNIAEAFAKRTGKDAIRVKNVV 144
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_BACC7 (ATP synthase subunit delta OS=Bacillus cereus (strain AH187) GN=atpH PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12 Identity = 44/141 (31.21%), Postives = 72/141 (51.06%), Query Frame = 3 Query: 270 VATSYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVM 689 VA YA+AL +AK + LE ++ ++ ++ + ++H F P I E+K+ + + S + L N L ILID KR+D++ +I E+ + N+ N A V S L E IA+ K TG +R+K V+ Sbjct: 6 VAKRYAVALFKIAKEKHVLEMFEEELRLVQNVYVKNGELHSFLTQPNISKEQKKTFLANVFGSVSESIL--NTLYILIDNKRIDILPEIADEYVVLANEERNVADATVYSTRLLSEEEKLNIAEAFAKRTGKDAIRVKNVV 144
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_BACC4 (ATP synthase subunit delta OS=Bacillus cereus (strain B4264) GN=atpH PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12 Identity = 44/141 (31.21%), Postives = 72/141 (51.06%), Query Frame = 3 Query: 270 VATSYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVM 689 VA YA+AL +AK + LE ++ ++ ++ + ++H F P I E+K+ + + S + L N L ILID KR+D++ +I E+ + N+ N A V S L E IA+ K TG +R+K V+ Sbjct: 6 VAKRYAVALFKIAKEKHVLEMFEEELRLVQNVYVKNGELHSFLTQPNISKEQKKTFLANVFGSVSESIL--NTLYILIDNKRIDILPEIADEYVVLANEERNVADATVYSTRLLSEEEKLNIAEAFAKRTGKDAIRVKNVV 144
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_BACC1 (ATP synthase subunit delta OS=Bacillus cereus (strain ATCC 10987) GN=atpH PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12 Identity = 44/141 (31.21%), Postives = 72/141 (51.06%), Query Frame = 3 Query: 270 VATSYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVM 689 VA YA+AL +AK + LE ++ ++ ++ + ++H F P I E+K+ + + S + L N L ILID KR+D++ +I E+ + N+ N A V S L E IA+ K TG +R+K V+ Sbjct: 6 VAKRYAVALFKIAKEKHVLEMFEEELRLVQNVYVKNGELHSFLTQPNISKEQKKTFLANVFGSVSESIL--NTLYILIDNKRIDILPEIADEYVVLANEERNVADATVYSTRLLSEEEKLNIAEAFAKRTGKDAIRVKNVV 144
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_BACCN (ATP synthase subunit delta OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=atpH PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.292e-11 Identity = 42/141 (29.79%), Postives = 72/141 (51.06%), Query Frame = 3 Query: 270 VATSYAIALVDLAKANNTLESTSADVEKIEKIFSE-KQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVM 689 VA YA+AL +AK + LE ++ ++ +F + +++H F P I E+K+ + + S + L N L IL+D KR++++ I E+ + N+ N A V S L E IA+ K TG +R+K ++ Sbjct: 6 VAKRYAVALFQIAKEKHVLEMFEEELGLVQSVFMKNEELHSFLTKPNISKEQKKMFLSNVFSSVSESIL--NTLYILVDNKRIEILPAIANEYVTLANEERNVADATVYSTRLLSEEEKLNIAEAFAKRTGKDAIRVKNIV 144
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_HELMI (ATP synthase subunit delta OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=atpH PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.688e-11 Identity = 35/134 (26.12%), Postives = 71/134 (52.99%), Query Frame = 3 Query: 258 MSATVATSYAIALVDLAKANNTLESTSADVEKIEKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTG 659 ++ VA YA AL+++ TL++ ++ + ++ ++ F +P+I + +K+++V + + A F+ ++ID +R DI +EF + NK+ N E A V+S V+L E + ++ Q+ TG Sbjct: 2 LTGAVARRYAQALLEIGIQTKTLDALEGELGRFVEMIGHPELQRFLFHPSIVVAEKKDLVGRLLATGAFSETARAFILLVIDRRRESYFADIFREFVRLANKVRNIEEARVTSAVELAPEQVERLRSQLAAATG 135
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_EMIHU (ATP synthase subunit delta, chloroplastic OS=Emiliania huxleyi GN=atpD PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.688e-11 Identity = 40/137 (29.20%), Postives = 80/137 (58.39%), Query Frame = 3 Query: 270 VATSYAIALVDLAKANNTLESTSADVEKIEKIFSEKQ-IHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRI 677 +A YA AL++LA AN++L+ T+ D+ + + + + +F NP I + K+ ++ ++ + T FL +L+D R+ + I +F E+ K + E+A V+S V+L ++ IA++++K+TGAK +++ Sbjct: 6 IAVPYAEALLELANANSSLKETTNDINIVSQFLANSSDLKKFLGNPLITRDAKKGVLKDVL-GEQIGEKTLTFLMLLVDRGRIAYLDGIAYKFLELSYKEESIEIAKVTSSVQLSAQQQKTIAEKLKKITGAKQIKL 141
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_CYAA5 (ATP synthase subunit delta OS=Cyanothece sp. (strain ATCC 51142) GN=atpH PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.688e-11 Identity = 43/146 (29.45%), Postives = 78/146 (53.42%), Query Frame = 3 Query: 249 GIRMSATVATSYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKT 683 G S +A YA AL+ LA++ + S D I I E ++ EF +P I E KR +++ + + L NFL +L+D +R+ ++ I +++ + K+TNT +A V++ +L + +++ LTGA++V +KT Sbjct: 3 GSLFSTEIAEPYAQALMSLAQSRDITRSIGEDCRSILDILEESAELREFISSPIIKDEDKRGVLNRLLGNDIHHYLR-NFLMLLVDKRRIVFLQAICEQYLALLRKLTNTVLAEVTASTELSEGQRRDVIDKIKALTGAESVELKT 147
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_PROM0 (ATP synthase subunit delta OS=Prochlorococcus marinus (strain MIT 9301) GN=atpH PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.879e-11 Identity = 37/140 (26.43%), Postives = 77/140 (55.00%), Query Frame = 3 Query: 267 TVATSYAIALVDLAKANNTLESTSADVEKI-EKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKT 683 +V T YA AL+ + N+ E ++V+++ E I + ++ + +P ++ + K+++++EI L NFL +L D +R+ ++ I+ F E+Y + +N +A V+S V+L E I K++ + G + + + T Sbjct: 6 SVTTPYAEALLQVVNENSQTEEMVSEVKQLLELINNSPELEKALSSPILETDAKKKIINEIFSKKVNSSLL-NFLKLLADRQRIGILTSILDRFLEIYRENSNIALATVTSAVELTDEQKGLITKKIINIAGTEKLELVT 144 The following BLAST results are available for this feature:
BLAST of FC875547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875547 ID=FC875547; Name=FC875547; organism=Citrus clementina; type=EST; length=699bpback to top |