FC875555

Overview
NameFC875555
Unique NameFC875555
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875555 vs. ExPASy Swiss-Prot
Match: CHSB_IPONI (Chalcone synthase B (Fragment) OS=Ipomoea nil GN=CHSB PE=3 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 5.794e-75
Identity = 118/171 (69.01%), Postives = 145/171 (84.80%), Query Frame = 1
Query:   85 AQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 597
            A++ +G A + AIGTATPA+ V+Q  YPD+YFRIT S+H+ E KEKF+R+C+KS I+KR++ LTEE+LK+NPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLTKL+GL  SVKR MMYQQGC AG  +LRLAKDLAE+
Sbjct:   16 AKKLEGDAKIWAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSKIRKRHLVLTEELLKKNPNLCTYNETSLNTRQDILVAEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDLAES 186          

HSP 2 Score: 53.1434 bits (126), Expect = 5.794e-75
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 3
Query:  597 HKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 722
            +KG RVLVVC+EIT   FRGP+    D+L+ Q LFGDGAAA+
Sbjct:  187 NKGGRVLVVCAEITINIFRGPSLEQDDNLLAQCLFGDGAAAM 228          
BLAST of FC875555 vs. ExPASy Swiss-Prot
Match: CHSA_IPOCO (Chalcone synthase A (Fragment) OS=Ipomoea cordatotriloba GN=CHSA PE=3 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 5.794e-75
Identity = 121/171 (70.76%), Postives = 144/171 (84.21%), Query Frame = 1
Query:   85 AQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 597
            A+R +G A +LAIGTATP + V+QA YPD+YFRIT SEH+ E KEKF+R+C+KS I+KR++ LTEE+LKENPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLTKL+GL  SVKR MMYQQGC AG  +LRL K LAEN
Sbjct:   14 AKRFEGHAKLLAIGTATPTNWVDQATYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHLVLTEELLKENPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLVKGLAEN 184          

HSP 2 Score: 51.9878 bits (123), Expect = 5.794e-75
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 3
Query:  597 HKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 722
            +KGARVLVVCS IT   FRGP+    D+L+ Q LFGDG+AA+
Sbjct:  185 NKGARVLVVCSGITINIFRGPSLEQDDNLLAQCLFGDGSAAM 226          
BLAST of FC875555 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTF (Chalcone synthase B (Fragment) OS=Ipomoea trifida GN=CHSB PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 9.854e-75
Identity = 122/175 (69.71%), Postives = 146/175 (83.43%), Query Frame = 1
Query:   79 RNAQR--ADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 597
            R A+R   +G A +LAIGTATPA+ V+Q  YPD+YFRIT S+H+ E KEKF+R+C+KS I+KR+M LTEE+LK+NPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIK WG+P S+ITHL+FCTTSGVDMPGAD+QLTKL+GL  SVKR MMYQQGC AG  +LRLAKDLAEN
Sbjct:   14 RRAKRFEIEGYAKILAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSNIRKRHMVLTEELLKKNPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKVWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDLAEN 188          

HSP 2 Score: 53.9138 bits (128), Expect = 9.854e-75
Identity = 25/42 (59.52%), Postives = 32/42 (76.19%), Query Frame = 3
Query:  597 HKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 722
            +KGARVLVVCSE+    FRGP+    D+L+ Q LFGDG+AA+
Sbjct:  189 NKGARVLVVCSEVMLSVFRGPSLQQEDNLLAQCLFGDGSAAI 230          
BLAST of FC875555 vs. ExPASy Swiss-Prot
Match: CHSC_IPOPU (Chalcone synthase C (Fragment) OS=Ipomoea purpurea GN=CHSC PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 2.852e-74
Identity = 118/173 (68.21%), Postives = 143/173 (82.66%), Query Frame = 1
Query:   79 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 597
            R  +R DG A +LAIGTA PA+ V+Q  YPD+YFRIT SEH+ E KEKF+R+C+KS I+KR++ +TEE+LK+NPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCT+SGVDMPGAD+QL KL+GL  SV R MMYQQGC AG  +LRLAKDLAEN
Sbjct:   14 RREKRFDGHAKILAIGTAIPANWVDQTTYPDFYFRITNSEHLLEYKEKFRRICNKSKIRKRHLVITEELLKKNPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTSSGVDMPGADFQLAKLLGLSSSVNRLMMYQQGCNAGAVMLRLAKDLAEN 186          

HSP 2 Score: 52.7582 bits (125), Expect = 2.852e-74
Identity = 25/42 (59.52%), Postives = 31/42 (73.81%), Query Frame = 3
Query:  597 HKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 722
            +KG RVLVVCSE+    FRGP+    D+L+ Q LFGDG+AAV
Sbjct:  187 NKGGRVLVVCSEVMLSVFRGPSLQQEDNLLAQCLFGDGSAAV 228          
BLAST of FC875555 vs. ExPASy Swiss-Prot
Match: CHSA_IPOTR (Chalcone synthase A (Fragment) OS=Ipomoea triloba GN=CHSA PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 1.076e-73
Identity = 118/171 (69.01%), Postives = 143/171 (83.63%), Query Frame = 1
Query:   85 AQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 597
            A+R +G A +LAIGTATP + V+QA YPD+YFRIT SE + E KEKF+R+C+KS I+ R++ LTEE+LK++PN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLTKL+GL  SVKR MMYQQGC AG  +LRL KDLAEN
Sbjct:   14 AKRFEGHAKLLAIGTATPTNWVDQATYPDFYFRITNSERLLEHKEKFRRICNKSKIRFRHLVLTEELLKKSPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLVKDLAEN 184          

HSP 2 Score: 54.6842 bits (130), Expect = 1.076e-73
Identity = 27/42 (64.29%), Postives = 33/42 (78.57%), Query Frame = 3
Query:  597 HKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 722
            +KGARVLVVCSEIT   FRGP+    D+L+ Q LFGDG+AA+
Sbjct:  185 NKGARVLVVCSEITINIFRGPSLEQDDNLLAQCLFGDGSAAM 226          
BLAST of FC875555 vs. ExPASy Swiss-Prot
Match: CHSA_IPONI (Chalcone synthase A (Fragment) OS=Ipomoea nil GN=CHSA PE=3 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 2.388e-73
Identity = 117/173 (67.63%), Postives = 143/173 (82.66%), Query Frame = 1
Query:   79 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 597
            R  +R +G A +LAIGTA PA+ V+Q  YPD+YFRIT SEH+ E KEKF+R+C+KS I+KR++ +TEE+LK+NPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCT+SGVDMPGAD+QL KL+GL  SV R MMYQQGC AG  +LRLAKDLAEN
Sbjct:   11 RREKRIEGHAKILAIGTAIPANWVDQTTYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHLVITEELLKKNPNLCTYNEASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTSSGVDMPGADFQLAKLLGLSSSVNRLMMYQQGCNAGAAMLRLAKDLAEN 183          

HSP 2 Score: 51.2174 bits (121), Expect = 2.388e-73
Identity = 25/42 (59.52%), Postives = 30/42 (71.43%), Query Frame = 3
Query:  597 HKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 722
            +KG RVLVVCSE+    FRGP+    D L+ Q LFGDG+AAV
Sbjct:  184 NKGGRVLVVCSEVMLNVFRGPSLEQEDYLLAQCLFGDGSAAV 225          
BLAST of FC875555 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTR (Chalcone synthase B (Fragment) OS=Ipomoea triloba GN=CHSB PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 5.294e-73
Identity = 118/175 (67.43%), Postives = 147/175 (84.00%), Query Frame = 1
Query:   79 RNAQR--ADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 597
            R A+R   +G A +LAIGTATPA+ V+Q  YPD+YFRIT S+H+ E KEKF+R+C+KS I+KR++ LTEE+L++NP++C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD++LTKL+GL  SVKR MMYQQGC AG  +LRLAKDLAE+
Sbjct:   14 RRAKRFEIEGYAKILAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSKIRKRHLVLTEELLQKNPSLCTYNETSLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFRLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDLAES 188          

HSP 2 Score: 52.7582 bits (125), Expect = 5.294e-73
Identity = 25/42 (59.52%), Postives = 32/42 (76.19%), Query Frame = 3
Query:  597 HKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 722
            +KG R+LVVCSEIT   FRGP+    D+L+ Q LFGDG+AA+
Sbjct:  189 NKGGRILVVCSEITINIFRGPSLEQDDNLLAQCLFGDGSAAM 230          
BLAST of FC875555 vs. ExPASy Swiss-Prot
Match: VPS_PSINU (Phloroisovalerophenone synthase OS=Psilotum nudum GN=VPS PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.173e-72
Identity = 111/173 (64.16%), Postives = 138/173 (79.77%), Query Frame = 1
Query:   79 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 597
            R  +RA GP +VLAIG+A P +  +Q+ +PD+YF IT+S HM E+K KF RMC KS IKKR M++ E+IL+ +P++ +Y   SLD RQD++V EVPKLGK AA  AI EWGQPKS ITHLIFCT+SG+DMPGAD+ L KL+GLRP+V R M+YQQGCFAG TVLR+AKDLAEN
Sbjct:   15 RKKERASGPVSVLAIGSANPPNVFHQSLFPDFYFNITQSNHMAEVKAKFTRMCAKSGIKKRRMHINEDILEAHPSIRSYHDNSLDVRQDMLVEEVPKLGKVAADNAIAEWGQPKSNITHLIFCTSSGIDMPGADWALMKLLGLRPTVNRVMVYQQGCFAGCTVLRIAKDLAEN 187          

HSP 2 Score: 65.4698 bits (158), Expect = 1.173e-72
Identity = 28/42 (66.67%), Postives = 38/42 (90.48%), Query Frame = 3
Query:  597 HKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 722
            +KG+R+LVVCSE+T ++FRGP + H ++LVGQALFGDGAAA+
Sbjct:  188 NKGSRILVVCSELTLISFRGPTEDHPENLVGQALFGDGAAAL 229          
BLAST of FC875555 vs. ExPASy Swiss-Prot
Match: BBS_PHASS (Bibenzyl synthase OS=Phalaenopsis sp. GN=BIBSY212 PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.429e-72
Identity = 106/180 (58.89%), Postives = 145/180 (80.56%), Query Frame = 1
Query:   58 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 597
            M +++ I+ A RADG A++LAIG A P + + Q+ YPD+YFR+T SEH+ +LK+KF+R+C+K+ I+KR+    EE L  NP    +M  SL+ RQ++ + E+PKLG +AATKAI++WGQPKS+ITHLIFCTTSG+D+PGADYQLT+++GL P+V+R M+YQQGCFAGGT LRLAK LAE+
Sbjct:    1 MLSLESIKKAPRADGFASILAIGRANPDNIIEQSAYPDFYFRVTNSEHLVDLKKKFQRICEKTAIRKRHFVWNEEFLTANPCFSTFMDKSLNVRQEVAISEIPKLGAKAATKAIEDWGQPKSRITHLIFCTTSGMDLPGADYQLTQILGLNPNVERVMLYQQGCFAGGTTLRLAKCLAES 180          

HSP 2 Score: 58.5362 bits (140), Expect = 4.429e-72
Identity = 28/41 (68.29%), Postives = 32/41 (78.05%), Query Frame = 3
Query:  600 KGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 722
            KGARVLVVC+E T V FR P++ H D LV QALF DGA+AV
Sbjct:  182 KGARVLVVCAETTTVLFRAPSEEHQDDLVTQALFADGASAV 222          
BLAST of FC875555 vs. ExPASy Swiss-Prot
Match: TBSYN_HYPAN (Trihydroxybenzophenone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 5.775e-72
Identity = 114/164 (69.51%), Postives = 132/164 (80.49%), Query Frame = 1
Query:  106 ATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 597
            A+VLAIGT  P H + Q DYPD+YFR T SEHMTELKEKFKR+C KS I+KR+ YLTEEILKEN  +  Y A SLDARQ I+  EVPKLG+EAA KAI EWGQP SKITH++F TTSG  MPGADY +T+L+GL  +V+R M+Y QGCFAGGT LR+AKDLAEN
Sbjct:   20 ASVLAIGTTNPEHFILQEDYPDFYFRNTNSEHMTELKEKFKRICVKSHIRKRHFYLTEEILKENQGIATYGAGSLDARQRILETEVPKLGQEAALKAIAEWGQPISKITHVVFATTSGFMMPGADYVITRLLGLNRTVRRVMLYNQGCFAGGTALRVAKDLAEN 183          

HSP 2 Score: 60.077 bits (144), Expect = 5.775e-72
Identity = 27/42 (64.29%), Postives = 36/42 (85.71%), Query Frame = 3
Query:  597 HKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 722
            ++GARVLVVC+E TA+TF  P ++HLD +VGQA+F DGAAA+
Sbjct:  184 NEGARVLVVCAENTAMTFHAPNESHLDVIVGQAMFSDGAAAL 225          
The following BLAST results are available for this feature:
BLAST of FC875555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHSB_IPONI5.794e-7569.01Chalcone synthase B (Fragment) OS=Ipomoea nil GN=C... [more]
CHSA_IPOCO5.794e-7570.76Chalcone synthase A (Fragment) OS=Ipomoea cordatot... [more]
CHSB_IPOTF9.854e-7569.71Chalcone synthase B (Fragment) OS=Ipomoea trifida ... [more]
CHSC_IPOPU2.852e-7468.21Chalcone synthase C (Fragment) OS=Ipomoea purpurea... [more]
CHSA_IPOTR1.076e-7369.01Chalcone synthase A (Fragment) OS=Ipomoea triloba ... [more]
CHSA_IPONI2.388e-7367.63Chalcone synthase A (Fragment) OS=Ipomoea nil GN=C... [more]
CHSB_IPOTR5.294e-7367.43Chalcone synthase B (Fragment) OS=Ipomoea triloba ... [more]
VPS_PSINU1.173e-7264.16Phloroisovalerophenone synthase OS=Psilotum nudum ... [more]
BBS_PHASS4.429e-7258.89Bibenzyl synthase OS=Phalaenopsis sp. GN=BIBSY212 ... [more]
TBSYN_HYPAN5.775e-7269.51Trihydroxybenzophenone synthase OS=Hypericum andro... [more]

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Properties
Property NameValue
Genbank descriptionC31405C01EF CTVClemen1 Citrus clementina cDNA clone C31405C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875555 ID=FC875555; Name=FC875555; organism=Citrus clementina; type=EST; length=723bp
GAGTGCACACTCACCAAGCACGAGCCACAAACATATTCATTAAGGGTTCA
ACTTGAAATGGCAACCGTTCAAGAGATCAGAAACGCTCAGCGTGCCGACG
GCCCGGCCACCGTCCTCGCCATCGGTACGGCCACGCCTGCCCACAGTGTC
AACCAGGCTGATTATCCCGACTATTACTTCAGGATCACAAAGAGCGAGCA
TATGACGGAGCTTAAAGAGAAGTTCAAGCGCATGTGTGACAAGTCGATGA
TTAAGAAGCGTTACATGTACTTAACGGAAGAGATTTTGAAGGAAAACCCC
AACATGTGCGCTTACATGGCTCCATCACTCGACGCACGTCAAGACATTGT
GGTGGTCGAAGTGCCGAAGCTCGGGAAAGAAGCTGCTACAAAGGCCATCA
AAGAATGGGGCCAGCCCAAGTCTAAGATCACCCACCTCATCTTCTGCACC
ACCTCCGGCGTCGACATGCCCGGCGCCGACTACCAGCTCACCAAACTGAT
CGGCCTGCGCCCCTCCGTCAAGCGCTTCATGATGTACCAACAAGGATGTT
TCGCCGGTGGCACTGTTCTTCGCCTCGCTAAAGACTTGGCTGAGAACACA
AGGGCGCTCGCGTTCTTGTTGTCTGTTCGGAGATCACGGCGGTCACTTTC
CGCGGCCCTGCCGATACTCATCTTGATTCTCTTGTGGGCCAGGCTTTGTT
CGGTGATGGTGCTGCTGCTGTGA
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