FC875558
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875558 vs. ExPASy Swiss-Prot
Match: HSP71_SCHPO (Probable heat shock protein ssa1 OS=Schizosaccharomyces pombe GN=ssa1 PE=1 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 2.342e-37 Identity = 73/102 (71.57%), Postives = 85/102 (83.33%), Query Frame = 3 Query: 234 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIR 539 IGIDLGTTYSCVG + N VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP TIFD KRLIGR+F D EVQ DMK P+K++ +DGKP IQV+ + Sbjct: 5 IGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFK 106
BLAST of FC875558 vs. ExPASy Swiss-Prot
Match: HS71L_MOUSE (Heat shock 70 kDa protein 1-like OS=Mus musculus GN=Hspa1l PE=2 SV=4) HSP 1 Score: 154.836 bits (390), Expect = 2.342e-37 Identity = 73/109 (66.97%), Postives = 87/109 (79.82%), Query Frame = 3 Query: 213 ATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIR 539 A G IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP T+FD KRLIGRKF D VQ DMKL P++++N GKP + V + Sbjct: 2 AANKGMAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVINEAGKPKVMVSYK 110
BLAST of FC875558 vs. ExPASy Swiss-Prot
Match: GRP78_PONAB (78 kDa glucose-regulated protein OS=Pongo abelii GN=HSPA5 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.342e-37 Identity = 78/121 (64.46%), Postives = 95/121 (78.51%), Query Frame = 3 Query: 183 LFAISIAKEEATK--LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQI 536 L + + A+EE K +GTV+GIDLGTTYSCVGV+KNG VEIIANDQGNRITP +VAFT + ERLIG+AAKNQ NP+ T+FD KRLIGR + D VQ+D+K P+K+V + KPYIQV I Sbjct: 12 LLSAARAEEEDKKEDVGTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPPYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPYIQVDI 132
BLAST of FC875558 vs. ExPASy Swiss-Prot
Match: HSP72_MOUSE (Heat shock-related 70 kDa protein 2 OS=Mus musculus GN=Hspa2 PE=1 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 3.059e-37 Identity = 74/105 (70.48%), Postives = 88/105 (83.81%), Query Frame = 3 Query: 225 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIR 539 G IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP TIFD KRLIGRKFED VQ DMK P+++V+ GKP +QV+ + Sbjct: 5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDRKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYK 109
BLAST of FC875558 vs. ExPASy Swiss-Prot
Match: GRP78_XENLA (78 kDa glucose-regulated protein OS=Xenopus laevis GN=hspa5 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 3.059e-37 Identity = 77/130 (59.23%), Postives = 98/130 (75.38%), Query Frame = 3 Query: 150 LVVLAIVFFGGLFAISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQI 536 L L ++ +FA S ++ +GTV+GIDLGTTYSCVGV+KNG VEIIANDQGNRITPS+VAFT + ERLIG+AAKNQ NP+ T+FD KRLIGR + D VQ+D+K P+K++ + KPYI+V I Sbjct: 6 LFALVLLVSASVFA-SDDDDKKDDIGTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKYLPFKVIEKKTKPYIEVDI 134
BLAST of FC875558 vs. ExPASy Swiss-Prot
Match: GRP78_SCHPO (78 kDa glucose-regulated protein homolog OS=Schizosaccharomyces pombe GN=bip1 PE=2 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 3.059e-37 Identity = 76/127 (59.84%), Postives = 94/127 (74.02%), Query Frame = 3 Query: 171 FFGGLFAISIA-----KEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQI 536 +F LF + +A GTVIGIDLGTTYSCV V KNG VEIIANDQGNRITPS+VAFT+ ERL+GEAAKNQA NP+ TIFD+KRLIGRKF++K + +D+K P+ IVN +P ++V + Sbjct: 12 YFVALFLLPMAFASGDDNSTESYGTVIGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNV 138
BLAST of FC875558 vs. ExPASy Swiss-Prot
Match: HS71L_RAT (Heat shock 70 kDa protein 1-like OS=Rattus norvegicus GN=Hspa1l PE=2 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 3.995e-37 Identity = 73/109 (66.97%), Postives = 87/109 (79.82%), Query Frame = 3 Query: 213 ATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIR 539 A G IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP T+FD KRLIGRKF D VQ DMKL P++++N GKP + V + Sbjct: 2 AANKGMAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVINEAGKPKVLVSYK 110
BLAST of FC875558 vs. ExPASy Swiss-Prot
Match: HS71L_MACFA (Heat shock 70 kDa protein 1-like OS=Macaca fascicularis GN=HSPA1L PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 3.995e-37 Identity = 73/109 (66.97%), Postives = 87/109 (79.82%), Query Frame = 3 Query: 213 ATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIR 539 A G IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP T+FD KRLIGRKF D VQ DMKL P++++N GKP + V + Sbjct: 2 AAAKGIAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVINEGGKPKVLVSYK 110
BLAST of FC875558 vs. ExPASy Swiss-Prot
Match: GRP78_DEBHA (78 kDa glucose-regulated protein homolog OS=Debaryomyces hansenii GN=KAR2 PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 3.995e-37 Identity = 73/103 (70.87%), Postives = 88/103 (85.44%), Query Frame = 3 Query: 225 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQ 533 GTVIGIDLGTTYSCVGV KNG VEI+ANDQGNRITPS+VAFT ERLIG+AAKNQA+ N + T+FD+KRLIG K+ DK VQ+++K PYKI +DGKP ++V+ Sbjct: 49 GTVIGIDLGTTYSCVGVMKNGKVEILANDQGNRITPSYVAFTPEERLIGDAAKNQASSNVENTVFDIKRLIGLKYNDKMVQKEIKHLPYKIDKKDGKPVVKVE 151
BLAST of FC875558 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEBR (Heat shock 70 kDa protein C OS=Caenorhabditis briggsae GN=hsp-3 PE=3 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 5.218e-37 Identity = 72/113 (63.72%), Postives = 93/113 (82.30%), Query Frame = 3 Query: 204 KEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT--DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQI 536 +++ TK GT+IGIDLGTTYSCVGVYKNG VEIIANDQGNRITPS+VAF+ +RLIG+AAKNQ +NP+ TIFD KRLIGR + DK VQ D+K P+K++++ KP ++V++ Sbjct: 26 EKKETKYGTIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGEQGDRLIGDAAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVLDKSNKPSVEVKV 138 The following BLAST results are available for this feature:
BLAST of FC875558 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875558 ID=FC875558; Name=FC875558; organism=Citrus clementina; type=EST; length=541bpback to top |