FC875560

Overview
NameFC875560
Unique NameFC875560
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length751
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_BACSU (Chaperone protein htpG OS=Bacillus subtilis GN=htpG PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.020e-30
Identity = 68/135 (50.37%), Postives = 100/135 (74.07%), Query Frame = 2 
Query:  305 KFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXEVI 709
            K EF+AE  RL+D++INS+Y+ K+IFLRELISN+SDA+DKI + +LTD  +  + D+    I++  DK+ + L+I D GIGMTK++L ++LGTIAKSG+ AF ++ +     ++IGQFGVGFY+ ++ AD   VI
Sbjct:    3 KKEFKAESKRLLDMMINSIYTQKEIFLRELISNSSDAIDKIYYKALTDDALTFDKDS--YYIKVAADKDARTLTISDTGIGMTKDELEQHLGTIAKSGSLAFKKENELKDGHDIIGQFGVGFYAAFMVADVVTVI 135
[Close]
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_ACTPJ (Chaperone protein htpG OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=htpG PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.020e-30
Identity = 72/138 (52.17%), Postives = 98/138 (71.01%), Query Frame = 2 
Query:  287 LRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQT--SGDLNLIGQFGVGFYSVYLGAD 694
            +  N E   FQ+EV +L+ ++I+SLYSNK+IFLRELISNASDA DK+RF +L++   L EGD  +L +++  D+    L+I D GIGM +E +I +LGTIAKSGT  F+  + T  + D  LIGQFGVGFYS ++ AD
Sbjct:    1 MSTNQETRGFQSEVKQLLQLMIHSLYSNKEIFLRELISNASDAADKLRFKALSN-PALYEGDG-ELRVRVSFDETLGTLTISDNGIGMNREQVIDHLGTIAKSGTKEFLNSLGTDQAKDSQLIGQFGVGFYSAFIVAD 136
[Close]
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_ACTP7 (Chaperone protein htpG OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=htpG PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.020e-30
Identity = 72/138 (52.17%), Postives = 98/138 (71.01%), Query Frame = 2 
Query:  287 LRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQT--SGDLNLIGQFGVGFYSVYLGAD 694
            +  N E   FQ+EV +L+ ++I+SLYSNK+IFLRELISNASDA DK+RF +L++   L EGD  +L +++  D+    L+I D GIGM +E +I +LGTIAKSGT  F+  + T  + D  LIGQFGVGFYS ++ AD
Sbjct:    1 MSTNQETRGFQSEVKQLLQLMIHSLYSNKEIFLRELISNASDAADKLRFKALSN-PALYEGDG-ELRVRVSFDETLGTLTISDNGIGMNREQVIDHLGTIAKSGTKEFLNSLGTDQAKDSQLIGQFGVGFYSAFIVAD 136
[Close]
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_ACTP2 (Chaperone protein htpG OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=htpG PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.020e-30
Identity = 72/138 (52.17%), Postives = 98/138 (71.01%), Query Frame = 2 
Query:  287 LRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQT--SGDLNLIGQFGVGFYSVYLGAD 694
            +  N E   FQ+EV +L+ ++I+SLYSNK+IFLRELISNASDA DK+RF +L++   L EGD  +L +++  D+    L+I D GIGM +E +I +LGTIAKSGT  F+  + T  + D  LIGQFGVGFYS ++ AD
Sbjct:    1 MSTNQETRGFQSEVKQLLQLMIHSLYSNKEIFLRELISNASDAADKLRFKALSN-PALYEGDG-ELRVRVSFDETLGTLTISDNGIGMNREQVIDHLGTIAKSGTKEFLNSLGTDQAKDSQLIGQFGVGFYSAFIVAD 136
[Close]
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_ACISJ (Chaperone protein htpG OS=Acidovorax sp. (strain JS42) GN=htpG PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.020e-30
Identity = 67/129 (51.94%), Postives = 95/129 (73.64%), Query Frame = 2 
Query:  314 FQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGAD 694
            FQAEV++L+ ++ +SLYSNK+IFLREL+SNASDA DK+RF +L +  +  +  N  LE+++  DKE + L+I D GIGM++++ I +LGTIAKSGT  F+ ++      D  LIGQFGVGFYS ++ AD
Sbjct:    8 FQAEVAQLLHLVTHSLYSNKEIFLRELVSNASDACDKLRFEALNNAALYEDAPN--LEVRVSFDKEARTLTITDNGIGMSEQEAIDHLGTIAKSGTRDFMNRLSGDQKADAQLIGQFGVGFYSGFIVAD 134
[Close]
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_RHOPA (Chaperone protein htpG OS=Rhodopseudomonas palustris GN=htpG PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.169e-30
Identity = 69/133 (51.88%), Postives = 96/133 (72.18%), Query Frame = 2 
Query:  299 AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM-QTSGDLNLIGQFGVGFYSVYLGAD 694
            +E   FQAEV+ L++++++S+YS  DIFLRELISNASDALDK+R+ S+   E++ +G   K+ I  K  K    L+I D GIGM +++LI NLGTIAKSGT +F+ K+ +T     LIGQFGVGFY+ ++ AD
Sbjct:    8 SETKPFQAEVAELLNLMVHSVYSETDIFLRELISNASDALDKLRYESIAKPELMEKGGEPKIRIIPK--KAPDTLTIVDNGIGMDRQELIDNLGTIAKSGTKSFISKLAETKDSAGLIGQFGVGFYAAFMVAD 138
[Close]
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_OCEIH (Chaperone protein htpG OS=Oceanobacillus iheyensis GN=htpG PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.169e-30
Identity = 67/135 (49.63%), Postives = 98/135 (72.59%), Query Frame = 2 
Query:  305 KFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXEVI 709
            K +F+AE  +L+D++INS+YS +++FLRELISNASDA+DKI + +LTD  +  + DN    I+I  +KE++ L++ D GIGMTKE+L  NLG IAKSG+  F  + +     ++IGQFGVGFY+ ++ AD  EV+
Sbjct:    3 KRKFKAESQKLLDMVINSIYSQREVFLRELISNASDAIDKIYYKALTDDSLSFDVDN--YYIKITPNKEERTLTVVDTGIGMTKEELENNLGVIAKSGSHTFKSENEIKDGHDIIGQFGVGFYAAFMVADKVEVV 135
[Close]
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPL (Chaperone protein htpG OS=Legionella pneumophila (strain Lens) GN=htpG PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.169e-30
Identity = 65/129 (50.39%), Postives = 98/129 (75.97%), Query Frame = 2 
Query:  314 FQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGAD 694
            FQ EV +++ ++++SLYSNK+IFLRELISNASDALDK+RFL+L++  +     + K+ IQI  +++ + ++I D GIG++ E+ ++NLGTIAKSGT  F+ ++  + + D  LIGQFGVGFYS ++ AD
Sbjct:   10 FQTEVKQMLHLVVHSLYSNKEIFLRELISNASDALDKLRFLALSNGSLFENDSDLKISIQI--NEKLQTITISDNGIGLSWEEAVENLGTIAKSGTKEFISQLTGEQAKDSQLIGQFGVGFYSAFIVAD 136
[Close]
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPH (Chaperone protein htpG OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=htpG PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.169e-30
Identity = 65/129 (50.39%), Postives = 98/129 (75.97%), Query Frame = 2 
Query:  314 FQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGAD 694
            FQ EV +++ ++++SLYSNK+IFLRELISNASDALDK+RFL+L++  +     + K+ IQI  +++ + ++I D GIG++ E+ ++NLGTIAKSGT  F+ ++  + + D  LIGQFGVGFYS ++ AD
Sbjct:   10 FQTEVKQMLHLVVHSLYSNKEIFLRELISNASDALDKLRFLALSNGSLFENDSDLKISIQI--NEKLQTITISDNGIGLSWEEAVENLGTIAKSGTKEFISQLTGEQAKDSQLIGQFGVGFYSAFIVAD 136
[Close]
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPC (Chaperone protein htpG OS=Legionella pneumophila (strain Corby) GN=htpG PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.169e-30
Identity = 65/129 (50.39%), Postives = 98/129 (75.97%), Query Frame = 2 
Query:  314 FQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGAD 694
            FQ EV +++ ++++SLYSNK+IFLRELISNASDALDK+RFL+L++  +     + K+ IQI  +++ + ++I D GIG++ E+ ++NLGTIAKSGT  F+ ++  + + D  LIGQFGVGFYS ++ AD
Sbjct:   10 FQTEVKQMLHLVVHSLYSNKEIFLRELISNASDALDKLRFLALSNGSLFENDSDLKISIQI--NEKLQTITISDNGIGLSWEEAVENLGTIAKSGTKEFISQLTGEQAKDSQLIGQFGVGFYSAFIVAD 136
The following BLAST results are available for this feature:
BLAST of FC875560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HTPG_BACSU7.020e-3050.37Chaperone protein htpG OS=Bacillus subtilis GN=htp... [more]
HTPG_ACTPJ7.020e-3052.17Chaperone protein htpG OS=Actinobacillus pleuropne... [more]
HTPG_ACTP77.020e-3052.17Chaperone protein htpG OS=Actinobacillus pleuropne... [more]
HTPG_ACTP27.020e-3052.17Chaperone protein htpG OS=Actinobacillus pleuropne... [more]
HTPG_ACISJ7.020e-3051.94Chaperone protein htpG OS=Acidovorax sp. (strain J... [more]
HTPG_RHOPA9.169e-3051.88Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
HTPG_OCEIH9.169e-3049.63Chaperone protein htpG OS=Oceanobacillus iheyensis... [more]
HTPG_LEGPL9.169e-3050.39Chaperone protein htpG OS=Legionella pneumophila (... [more]
HTPG_LEGPH9.169e-3050.39Chaperone protein htpG OS=Legionella pneumophila s... [more]
HTPG_LEGPC9.169e-3050.39Chaperone protein htpG OS=Legionella pneumophila (... [more]

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Properties
Property NameValue
Genbank descriptionC31405C07EF CTVClemen1 Citrus clementina cDNA clone C31405C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875560 ID=FC875560; Name=FC875560; organism=Citrus clementina; type=EST; length=751bp
GAATAGGCAATAATTTGATCATTTTTAGCTGATCGAAGATACTAGAACTA
TACTAATTTCAAAGTTAACAATGAGGAAGTGGACAATCCCTTCCATATTG
CTTCTCCTTTTCCTTCTCGCCCTGATTCCAGATCAAGGCCGAAATATACA
GGCAAAAGCAGAGGATGAATCTGATAAACTAGTGGATCCTCCTAAGGTCG
AGGAGAAACTCGGAGCCGTACCAAATGGTTTGTCGACAGATTCTGACGTG
GCAAAGAGGGAAGCGGAGTCGATCTCGAAGAGGTCACTTCGTAATAATGC
GGAGAAATTTGAATTCCAAGCTGAGGTGTCTCGGCTCATGGATATTATCA
TCAATTCTCTTTACAGCAACAAAGATATTTTCCTCAGAGAGTTGATTTCC
AATGCTTCTGATGCACTAGACAAGATTAGATTCCTCTCTTTGACTGACAA
AGAGGTCTTGGGAGAAGGAGACAACACTAAGCTGGAGATCCAGATTAAGC
TAGACAAAGAGAAGAAAATTCTTTCAATTCGTGACAGAGGTATTGGTATG
ACGAAGGAGGATTTAATCAAGAACTTGGGAACCATTGCAAAATCTGGAAC
ATCAGCATTTGTTGAGAAAATGCAGACTAGCGGTGACCTCAATCTTATTG
GGCAATTTGGTGTTGGCTTTTACTCTGTATATCTTGGTGCTGACTATGNT
GAAGTCATTTAGCAACATATGATGACAACAGTATGTATGGGAATCAAGGC
T
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