FC875560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_RHOP2 (Chaperone protein htpG OS=Rhodopseudomonas palustris (strain HaA2) GN=htpG PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.943e-29 Identity = 67/133 (50.38%), Postives = 96/133 (72.18%), Query Frame = 2 Query: 299 AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGD-LNLIGQFGVGFYSVYLGAD 694 +E FQAEV+ L++++++S+YS DIFLRELISNASDALDK+R+ S+ + ++ +G K+ I K K L++ D GIGM +++LI NLGTIAKSGT +F+ K+ + D LIGQFGVGFY+ ++ AD Sbjct: 8 SETKPFQAEVAELLNLMVHSVYSETDIFLRELISNASDALDKLRYESIANPALMADGGEPKIRIVPK--KAPDTLTVIDNGIGMDRQELIDNLGTIAKSGTKSFLTKLTEAKDGAGLIGQFGVGFYAAFMVAD 138
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_RHOFD (Chaperone protein htpG OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=htpG PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.943e-29 Identity = 68/133 (51.13%), Postives = 92/133 (69.17%), Query Frame = 2 Query: 302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGAD 694 + FQAEV++L+ ++ +SLYSNK+IFLRELISNASDA DK+R+ ++ D + D LE+++ D K L+I D GIGM+ ++ I +LGTIAKSGT FV K+ D LIGQFGVGFYS ++ AD Sbjct: 4 QTLSFQAEVAQLLHLVTHSLYSNKEIFLRELISNASDACDKLRYEAINDSGLY--EDAPTLEVRVSFDPAAKTLTISDNGIGMSAQEAIDHLGTIAKSGTKDFVSKLSGDQKADSQLIGQFGVGFYSGFIVAD 134
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_RHIME (Chaperone protein htpG OS=Rhizobium meliloti GN=htpG PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.943e-29 Identity = 64/144 (44.44%), Postives = 104/144 (72.22%), Query Frame = 2 Query: 287 LRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM---QTSGDLNLIGQFGVGFYSVYLGADYXEVI 709 + + EK F+A+V++L+ ++++S+YS+K++FLRELISNA+DA +K+R+ ++ E+LG ++ I + LD+E L I D GIGM +++L+++LGTIA+SGT AF+E++ Q LIGQFGVGFYS ++ AD +V+ Sbjct: 4 VETSVEKHVFEADVAKLLHLMVHSVYSDKNVFLRELISNAADACEKLRYEAIVAPELLGSDPASR--ITLTLDEENARLVIEDNGIGMGRDELVESLGTIARSGTRAFMERIEAAQNKDGAQLIGQFGVGFYSAFMVADNVDVV 145
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_RALME (Chaperone protein htpG OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=htpG PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.943e-29 Identity = 67/133 (50.38%), Postives = 95/133 (71.43%), Query Frame = 2 Query: 302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGAD 694 E FQAEV +L+ ++I+SLYSNK+IFLREL+SNASDA DK+RF ++ + +L ++ L I+I+ D + L I D GIGM++++ I+NLGTIA+SGT F +++ D LIGQFGVGFYS ++ AD Sbjct: 6 ETMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDATDKLRFEAIANPALL--ENDADLAIRIEADPAARTLKITDNGIGMSRDEAIRNLGTIARSGTKEFFQQLSGDQQKDAALIGQFGVGFYSAFIVAD 136
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_MYCUA (Chaperone protein htpG OS=Mycobacterium ulcerans (strain Agy99) GN=htpG PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.943e-29 Identity = 67/140 (47.86%), Postives = 98/140 (70.00%), Query Frame = 2 Query: 302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGT----SAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXEVI 709 E+ EFQAE +L+D++I+S+YSNKD FLRELISNASDALDK+R + +K++ E D + L I+ + DK + L++RD GIGMT+ +++ +GT+AKSGT + E + LIGQFG+GFYS ++ AD E++ Sbjct: 6 EQLEFQAEARQLLDLMIHSVYSNKDSFLRELISNASDALDKLRIEAFRNKDL--EVDTSDLHIETEADKGARTLTVRDNGIGMTRAEVVDLIGTLAKSGTAELRAQLREAKNDAASEELIGQFGIGFYSSFMVADKVELL 143
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_BURXL (Chaperone protein htpG OS=Burkholderia xenovorans (strain LB400) GN=htpG PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.943e-29 Identity = 70/133 (52.63%), Postives = 94/133 (70.68%), Query Frame = 2 Query: 302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGAD 694 E FQAEV +L+ ++I+SLYSNK+IFLRELISNASDA DK+RF ++ + L E D L I++ DK+ + ++I D GIGM++++ I NLGTIA+SGT F K+ D LIGQFGVGFYS ++ AD Sbjct: 4 ETMSFQAEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFEAI-ENSALYEND-PNLRIRVSYDKDARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFGKLSGDQQKDAALIGQFGVGFYSGFIVAD 134
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_PELPD (Chaperone protein htpG OS=Pelobacter propionicus (strain DSM 2379) GN=htpG PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.762e-29 Identity = 68/131 (51.91%), Postives = 102/131 (77.86%), Query Frame = 2 Query: 311 EFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQ---TSGDLNLIGQFGVGFYSVYLGAD 694 +FQ EV +L+D++I+SLYSN+DIFLRELISN+SDA+DKIRF + +++E+L EG N+ +I++ DK+ L+I D GIGMT ++ +N+GTIA+SGT AF++ ++ + + LIGQFGVGFY+ ++ AD Sbjct: 7 QFQTEVKQLLDLVIHSLYSNRDIFLRELISNSSDAIDKIRFEAHSNEELL-EG-NSDWKIKLIPDKDAGTLTILDNGIGMTMAEVEENIGTIARSGTKAFMQALKDKSATDNPELIGQFGVGFYASFMVAD 135
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_BURTA (Chaperone protein htpG OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=htpG PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.762e-29 Identity = 70/133 (52.63%), Postives = 93/133 (69.92%), Query Frame = 2 Query: 302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGAD 694 + FQAEV +L+ ++I+SLYSNK+IFLREL+SNASDA DK+RF +L + L E D L I++ DK + L+I D GIGM++++ I NLGTIA+SGT F K+ D LIGQFGVGFYS ++ AD Sbjct: 4 QTMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFEAL-ENNALYESD-PNLRIRLSFDKAARTLTIDDNGIGMSRDEAIANLGTIARSGTKEFFSKLSGDQQKDAALIGQFGVGFYSGFIVAD 134
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_NITHX (Chaperone protein htpG OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=htpG PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.014e-28 Identity = 64/145 (44.14%), Postives = 107/145 (73.79%), Query Frame = 2 Query: 299 AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVE-------KMQTSGD-LNLIGQFGVGFYSVYLGADYXEVI 709 AE F+A+V++L+ ++++S+YS+KD+FLRELISNA+DA +++R+ +++D +L D+ + +I I +D E++ L++ D GIGM++++++ LGTIA+SGT AF+E K +GD + +IGQFGVGFYS ++ AD +VI Sbjct: 11 AESRVFEADVAKLLQMMVHSVYSDKDVFLRELISNAADACERLRYDAISDPALL--ADDARPQIAITIDAERRQLTVDDNGIGMSRDEMVDALGTIARSGTKAFIEQAKVEQAKSAEAGDGVTVIGQFGVGFYSAFMVADQVDVI 153
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_METS4 (Chaperone protein htpG OS=Methylobacterium sp. (strain 4-46) GN=htpG PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.014e-28 Identity = 68/138 (49.28%), Postives = 99/138 (71.74%), Query Frame = 2 Query: 302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM---QTSGDLNLIGQFGVGFYSVYLGADYXEV 706 E+ F AEV RL+D+++++LYS ++IFLREL++NA+DA+D+ RF +LTD + D +++I+ DK + L+I D GIGM+KEDL +NLGTIA+SGT AF + + + +LIGQFGVGFYS ++ AD EV Sbjct: 6 ERHAFGAEVGRLLDLVVHALYSEREIFLRELVANAADAVDRRRFGALTDPALSLPAD---AKVRIRPDKAARTLAISDPGIGMSKEDLAQNLGTIARSGTRAFSQSLADAKPDERPSLIGQFGVGFYSAFMVADRVEV 140 The following BLAST results are available for this feature:
BLAST of FC875560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 380
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875560 ID=FC875560; Name=FC875560; organism=Citrus clementina; type=EST; length=751bpback to top |