FC875566
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HSFA3_ORYSJ (Heat stress transcription factor A-3 OS=Oryza sativa subsp. japonica GN=HSFA3 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.589e-31 Identity = 78/192 (40.62%), Postives = 111/192 (57.81%), Query Frame = 2 Query: 62 ERMAQRSVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEI-RRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTSSPE---SKNQGSVETAKFADLSDENAKLRRDNETLSSELAQAKKQCDELITFLTEYVK 625 E + Q PFL KTY LV +P D VISW +G +F+VW + FA+D+LP++FKHNNFSSFVRQLNTYGFRK+ AD+WEFA+E+F R + L +I RRR + T QS P +SGE S PE + + S + L E+ + TL+ L A+ + ++++FL + ++ Sbjct: 57 EALLQGPQLPPFLSKTYDLVCEPELDGVISWGHAGNSFVVWDPSAFARDVLPHHFKHNNFSSFVRQLNTYGFRKVHADRWEFAHEDFLRHSKHLLKKIVRRRSSPTQQS--------GLQPGSSGE-----SGLDPELNTLRREKSALLQEVTRLKQEHLQTIEQMSTLNQRLESAEDRQKQMVSFLAKLLQ 235
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HSFC1_ARATH (Heat stress transcription factor C-1 OS=Arabidopsis thaliana GN=HSFC1 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.767e-31 Identity = 76/200 (38.00%), Postives = 113/200 (56.50%), Query Frame = 2 Query: 56 NRERMAQRSVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTSSPESKNQGSVETAKFADLSDENAKLRRDNETLSSELAQAKKQCDELITFLTEYVKVGPDQINRIM 655 N +V APF++KTYQ+V+DPSTD +I+W + +FIV DF++ +LP YFKHNNFSSFVRQLNTYGFRK+ D+WEFANE+F RG + L I RRK A G G+D+ G + + L +E +L + + ++ + +K+ ++++ FL + V+ PD + R+M Sbjct: 5 NSNNNNNNNVIAPFIVKTYQMVNDPSTDWLITWGPAHNSFIVVDPLDFSQRILPAYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEHFLRGQKHLLNNIARRKHARGM---------------YGQDL-----------EDGEI-VREIERLKEEQRELEAEIQRMNRRIEATEKRPEQMMAFLYKVVE-DPDLLPRMM 176
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HSFA5_ORYSJ (Heat stress transcription factor A-5 OS=Oryza sativa subsp. japonica GN=HSFA5 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.767e-31 Identity = 74/168 (44.05%), Postives = 100/168 (59.52%), Query Frame = 2 Query: 86 PAPFLMKTYQLVDDPSTDDVISWNE-SGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTSSPESKNQGSVETAKFADLSDENAKLRRDNETLSSELAQAKKQ 586 PAPFL+KTY++VDDPSTD V+SW++ S A+F+VW +FA LLP YFKH+NFSSF+RQLNTYGFRKI ++WEFANE F +G + L I RRK P +S S G++ + A DE +L R+ L ++L ++K+Q Sbjct: 19 PAPFLLKTYEMVDDPSTDAVVSWSDASDASFVVWNHPEFAARLLPAYFKHSNFSSFIRQLNTYGFRKIDPERWEFANEYFIKGQKHLLKNIHRRK-----------------PIHS------------HSHPPGALPDNERAIFEDEIERLSREKSNLQADLWKSKQQ 157
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HFA7A_ARATH (Heat stress transcription factor A-7a OS=Arabidopsis thaliana GN=HSFA7A PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.767e-31 Identity = 58/103 (56.31%), Postives = 76/103 (73.79%), Query Frame = 2 Query: 80 SVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTATGQSA 388 + P PFL KT+++VDDP+TD ++SWN G +F+VW F+ LLP +FKH+NFSSF+RQLNTYGFRKI A++WEFANE F G R+ L I+RR T S+ Sbjct: 25 NAPPPFLTKTFEMVDDPNTDHIVSWNRGGTSFVVWDLHSFSTILLPRHFKHSNFSSFIRQLNTYGFRKIEAERWEFANEEFLLGQRQLLKNIKRRNPFTPSSS 127
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HSFA5_ARATH (Heat stress transcription factor A-5 OS=Arabidopsis thaliana GN=HSFA5 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.191e-30 Identity = 59/107 (55.14%), Postives = 77/107 (71.96%), Query Frame = 2 Query: 86 PAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKT 406 PAPFL+KTY++VDD STD ++SW+ + +FIVW A+F++ LLP YFKHNNFSSF+RQLNTYGFRKI ++WEF N++F + + L I RRK S A T Sbjct: 21 PAPFLVKTYEMVDDSSTDQIVSWSANNNSFIVWNHAEFSRLLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFLNDDFIKDQKHLLKNIHRRKPIHSHSHPPASST 127
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HFA6A_ORYSJ (Putative heat stress transcription factor A-6a OS=Oryza sativa subsp. japonica GN=HSFA6A PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.191e-30 Identity = 74/170 (43.53%), Postives = 99/170 (58.24%), Query Frame = 2 Query: 89 APFLMKTYQLVDDPSTDDVISWNESGA-TFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTSSPESKNQGSVETAKFADLSDENAKLRRDNETLSSELAQAKKQCDE 595 APFL+KT+++V+DP+TD V+SW + +F+VW FA LLP +FKH NFSSF+RQLNTYGFRK+ AD+WEFANE+F G R L IRRR+ G + T +A + G +G VE +LRRD E L+ ELA+ ++Q E Sbjct: 42 APFLVKTFEMVEDPATDAVVSWGGAARNSFVVWDPHAFAAGLLPLHFKHANFSSFLRQLNTYGFRKVSADRWEFANEDFLGGQRHLLANIRRRRRGAGTGSTT---PRAVNCGGGG--------------GEGEVE------------RLRRDKEALARELARLRRQQQE 182
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HFA4A_ARATH (Heat stress transcription factor A-4a OS=Arabidopsis thaliana GN=HSFA4A PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.376e-30 Identity = 58/110 (52.73%), Postives = 79/110 (71.82%), Query Frame = 2 Query: 56 NRERMAQRSVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTATGQS 385 N ++ S+P PFL KTY++VDD S+D ++SW++S +FIVW +F++DLLP +FKHNNFSSF+RQLNTYGFRK ++WEFAN++F RG + I RRK S Sbjct: 4 NNHGVSSSSLP-PFLTKTYEMVDDSSSDSIVSWSQSNKSFIVWNPPEFSRDLLPRFFKHNNFSSFIRQLNTYGFRKADPEQWEFANDDFVRGQPHLMKNIHRRKPVHSHS 112
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HSFA2_ARATH (Heat stress transcription factor A-2 OS=Arabidopsis thaliana GN=HSFA2 PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.327e-30 Identity = 72/186 (38.71%), Postives = 102/186 (54.84%), Query Frame = 2 Query: 86 PAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTSSPESKNQGSVETAK--FADLSDENAKLRRDNETLSSELAQ-------AKKQCDELITFLTE 616 P PFL KTY++V+DP+TD V+SW+ +F+VW + F+ LLP YFKH+NFSSF+RQLNTYGFRKI D+WEFANE F G + L I+RR+ Q+ G G + + G VE K L E +LR+ + S++A +K+ +++TFL + Sbjct: 42 PPPFLTKTYEMVEDPATDTVVSWSNGRNSFVVWDSHKFSTTLLPRYFKHSNFSSFIRQLNTYGFRKIDPDRWEFANEGFLAGQKHLLKNIKRRRNMGLQNVNQQGS-------------GMSCVEVGQYGFDGEVERLKRDHGVLVAEVVRLRQQQHSSKSQVAAMEQRLLVTEKRQQQMMTFLAK 214
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HFA2D_ORYSJ (Heat stress transcription factor A-2d OS=Oryza sativa subsp. japonica GN=HSFA2D PE=2 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.088e-29 Identity = 72/194 (37.11%), Postives = 106/194 (54.64%), Query Frame = 2 Query: 86 PAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTAT--GQSAQTAGKTKATSPSNSGEDMGSTSTSSPESKNQGSVETAKFADLSDENAKLRRDNETLSSELAQAKKQCDELITFLTEYVKVGPDQINRIMGQ 661 P PFL KT+ LV DP+TD V+SW +G++F+VW FA LP +FKHNNFSSFVRQLNTYGFRKI D+WEFAN+ F RG R L I+RR+ + S Q G E++ K ++ A+ L + + + + L A+++ +++ FL ++ PD ++++ Q Sbjct: 35 PPPFLTKTFDLVADPATDGVVSWGRAGSSFVVWDPHVFAAVFLPRFFKHNNFSSFVRQLNTYGFRKIDPDRWEFANDGFLRGQRHLLKMIKRRRPLSYLPGSQQALGTCLEVGQFGLDEEI-------DRLKRDKNILLAEVVKLRHKQQSTKANMRAMEERLQHAEQKQVQMMGFLARAMQ-NPDFFHQLIHQ 220
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HSF30_SOLPE (Heat shock factor protein HSF30 OS=Solanum peruvianum GN=HSF30 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.423e-29 Identity = 66/167 (39.52%), Postives = 95/167 (56.89%), Query Frame = 2 Query: 86 PAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTSSPESKNQGSVETAKFADLSDENAKLRRDNETLSSELAQAKKQ 586 P PFL KTY++V+D STD VISW+ + +FIVW + F+ LLP +FKH+NFSSF+RQLNTYGFRK+ D+WEFANE F G + L I+RR+ N G+ M + G+ + + +E +L+RD L +E+ + ++Q Sbjct: 29 PPPFLSKTYEMVEDSSTDQVISWSTTRNSFIVWDSHKFSTTLLPRFFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQKHLLKTIKRRR-------------------NVGQSM--------NQQGSGACIEIGYYGMEEELERLKRDKNVLMTEIVKLRQQ 168 The following BLAST results are available for this feature:
BLAST of FC875566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875566 ID=FC875566; Name=FC875566; organism=Citrus clementina; type=EST; length=710bpback to top |