FC875568
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 185.652 bits (470), Expect = 2.146e-46 Identity = 95/195 (48.72%), Postives = 112/195 (57.44%), Query Frame = 2 Query: 119 GSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPS 703 G G G G G G L II MF+D+L YRND +CPA GFYTY+AFI AAK FP FGN+G++ MR REIAAF QT HET G W A G +Y WGYC + NYNY CG+DL LL P+L+ TDP ++FK+A+WFWMT Q PKPSCH VIT+ W PS Sbjct: 66 GGGGGGGGGGGGGGGGDGYLSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGWWPAAQGDQYDWGYCHM------------------------------NYNYGLCGDDL--NLPLLQEPELVETDPFIAFKTALWFWMTPQSPKPSCHAVITESWTPS 228
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 6.243e-46 Identity = 91/176 (51.70%), Postives = 115/176 (65.34%), Query Frame = 2 Query: 176 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPS 703 +G I++ ++F ++L RND RCPA GFYTYDAFI AA +FP FG SG++T R +EIAAFF QT HETTGG A + GYCF+ + +YYGRGPIQLT NY + G + ++L+NNPDL+ATD +SFK+AIWFWMT Q KPS H+VI W PS Sbjct: 27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD-----------RYYGRGPIQLTNQNNYEKAGNAI--RQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPS 187
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.623e-44 Identity = 91/204 (44.61%), Postives = 127/204 (62.25%), Query Frame = 2 Query: 107 ARNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR-GK-YYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWMTAQ-PPKPSCHEVITDEWKPS 703 +R+ G V T G + +++ + FE +LP+R+D CPARGFY Y AF+ AA AFPAF +G+ R RE+AAF AQT H T+ GG Y+WGYC+ S +C N +PC GK Y+ RGP+Q+ +NYNY GE + G +LL NP+L+ATDP ++FK+A+W WMTA+ P +PS H V+T +W P+ Sbjct: 74 SRDGGDDDVAAVLLTAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAI--GADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPT 268
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.623e-44 Identity = 91/204 (44.61%), Postives = 127/204 (62.25%), Query Frame = 2 Query: 107 ARNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR-GK-YYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWMTAQ-PPKPSCHEVITDEWKPS 703 +R+ G V T G + +++ + FE +LP+R+D CPARGFY Y AF+ AA AFPAF +G+ R RE+AAF AQT H T+ GG Y+WGYC+ S +C N +PC GK Y+ RGP+Q+ +NYNY GE + G +LL NP+L+ATDP ++FK+A+W WMTA+ P +PS H V+T +W P+ Sbjct: 74 SRDGGDDDVAAVLLTAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAI--GADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPT 268
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.347e-40 Identity = 84/176 (47.73%), Postives = 107/176 (60.80%), Query Frame = 2 Query: 176 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPS 703 + +IS +FE +L +R GFYTYDAFI AAK+FPAF +G+ +R RE+AAF AQT HETTGGW AP G Y G Y+GRGPIQ+++NYNY G+ + G +LL NPDL+ +D + FK+A+WFWMT Q PKPS H+VIT W PS Sbjct: 1 VSSVISSSLFEKMLLHR--------GFYTYDAFIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGPYELG-------------------STSDYFGRGPIQISYNYNYGAAGKAI--GVDLLRNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPS 147
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 147.517 bits (371), Expect = 6.476e-35 Identity = 73/182 (40.11%), Postives = 114/182 (62.64%), Query Frame = 2 Query: 149 TGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEIS-PPSPYC-NLNYPCRG--KYYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVI 682 +G+ T +++ +F+ + +R D CP++GFY+Y +F+ AA++FPAFG G+ R RE+AAF A T+G D +AWG C I+ + + +C + ++PC KY RGPIQLT N+NY G+ +G E+L+ NPDL+ DP++SFK+A+WFWM+ KPSCH+++ Sbjct: 121 SGNSTANSIGNVVVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSGERSDVEN-PHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNYGLAGQAIG--EDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIV 297
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.018e-28 Identity = 73/181 (40.33%), Postives = 104/181 (57.46%), Query Frame = 2 Query: 116 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSP-YC---NLNYPC-RGK-YYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFW 640 CG+G G D T+ + I++ E F L+ +D C A+GFYT DAF+ AA +P+FG +G+ REIAAFFA HET +C+I EI PS YC + +PC GK YYGRGP+Q++WN+NY G+ + G + L +PD +A PVL+F++A+W+W Sbjct: 49 CGTGCQAGPCDVP-ATNDVSVASIVTPEFFAALVAQADD-GCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETI-------------KFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSI--GFDGLGDPDAVARSPVLAFQTALWYW 212
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.708e-27 Identity = 68/180 (37.78%), Postives = 94/180 (52.22%), Query Frame = 2 Query: 119 GSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC---NLNYPCRG--KYYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWM 643 G G G G G+ G + +++ F + C + FYT AF+ A A+P F + G E REIAAFFA HET +C+ISEI+ + YC N +PC KYYGRGP+Q++WNYNY G D+G L +P+ +A D V++FK+A+WFWM Sbjct: 61 GGGGGGGGGGGGGGSGGANVANVVTDAFFNGIKNQAGS-GCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHET-------------GHFCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNG--LADPNRVAQDAVIAFKTALWFWM 224
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 8.477e-27 Identity = 74/191 (38.74%), Postives = 103/191 (53.93%), Query Frame = 2 Query: 116 CGSGVVCGERDTGHGTD----GGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPS-PYCNLN---YPCR-GK-YYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWMTAQPP 658 CG+G G + GT GG +G I+++ F ++ C + FYT D+FI AA FP F NS + REIA FA HET +C+I EI+ S YC+ N YPC GK Y+GRGPIQL+WNYNY CG+ L LL P+L++++P ++F++ +WFWM + P Sbjct: 48 CGTGCRSGPCRSPGGTPSPPGGGSVGSIVTQAFFNGIINQAGG-GCAGKNFYTRDSFINAANTFPNFANS----VTRREIATMFAHFTHETGH-------------FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSL--NLNLLGQPELVSSNPTVAFRTGLWFWMNSVRP 218
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.467e-26 Identity = 66/188 (35.11%), Postives = 96/188 (51.06%), Query Frame = 2 Query: 116 CGSGVVCGERDTGHGTDGG-----ELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCN---LNYPCRG--KYYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWMTA 649 CG G G +G G G + +++ F + C + FYT AF+ A K +P F + G++ REIAAFFA HET +C+ISEI+ + YC+ +PC KYYGRGP+Q++WNYNY G + G + L +P +A D V++FK+A+WFWM + Sbjct: 44 CGDGCQSGPCRSGRGGGGSGGGGANVASVVTSSFFNGIKNQAGS-GCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHET-------------GHFCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAI--GFDGLGDPGRVARDAVVAFKAALWFWMNS 215 The following BLAST results are available for this feature:
BLAST of FC875568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875568 ID=FC875568; Name=FC875568; organism=Citrus clementina; type=EST; length=703bpback to top |