FC875579

Overview
NameFC875579
Unique NameFC875579
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length670
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: P2C20_ORYSJ (Probable protein phosphatase 2C 20 OS=Oryza sativa subsp. japonica GN=Os02g0600000 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 7.397e-22
Identity = 75/276 (27.17%), Postives = 124/276 (44.93%), Query Frame = 3
Query:    3 KSEDGKLRCGYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRD----------------------------------DGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVM----------WAGTWRVG-----GVLAMSRAFGNRMLK---------QFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAV 656
            + E+ +++   SS +G    MED +     N+D      FGV+DGHGG+  A Y  +     L  H  + ++   A+   +   D D   S  D +R+                                  +GSTA   ++ G+ L V + GDSR V+S+ G+A  LS DHKP+   ER+R++NAGGV +          W    + G     G +++SR+ G+   K         Q +   P+I  +++ +  E LV+A++GLW  + N++ V
Sbjct:   63 EKENDRIKYVVSSMQGWGEKMEDAH-AAILNLDDTMTSFFGVYDGHGGAEVASYCAKRFHIELCNHEDYDSNLSNAMRSAFYSMDEDLQLS--DAWRELVIPRNNGWMYFIKAGVCANLSPFPQATYTAPSYEGSTACVVVIRGDQLIVGHAGDSRCVLSRNGQASALSVDHKPDSESERERVQNAGGVAVGYSYRKIMGRWVTKKQWGFTDFKGRVSISRSIGDFACKKNERLPPEDQMLTCNPDILTMDITDDMEFLVIATEGLWCNMTNQNVV 335          
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: PPM1G_MOUSE (Protein phosphatase 1G OS=Mus musculus GN=Ppm1g PE=2 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 1.648e-21
Identity = 61/156 (39.10%), Postives = 91/156 (58.33%), Query Frame = 3
Query:  216 DTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLK---------QFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAV 656
            DT+ A  +  ++  V  +E + +   D G+TA  A++ G  L VAN GDSR V+S+AGKA+ +S DHKP    E  RI+NAGG V   G  RV G L +SRA G+   K         Q + A P+I+ L + +  E +V+A DG+W+V+ +++ V
Sbjct:  297 DTEEAEEDDDEEMMVPGMEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDG--RVNGGLNLSRAIGDHFYKRNKNLPPQEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVV 450          
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: SPNA_DICDI (Protein spalten OS=Dictyostelium discoideum GN=spnA PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.152e-21
Identity = 74/239 (30.96%), Postives = 120/239 (50.21%), Query Frame = 3
Query:   18 KLRCGYSSFRGKRATMEDFYDIKTSNVDGQA----------VCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMT-DTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAG-----------KAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQ----FVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAV 656
            KL  G+ S +G+R  MED + I  +N+ G            +  + V+DGHGG+  +  L+  +   L+    F   D + A  + Y + D   +E         GST  +A+LVGN LY ANVGDS  V+++A            + + LS  H  +   E+KR+ + GG++++    R+ G LA+SR+FG++  K+    F V++P     ++       +LA DGLWD V  ++AV
Sbjct:  702 KLESGFGSLQGRRKNMEDTHVI-LNNLMGAVTYNGPPKDIPISYYAVYDGHGGTETSTLLEPTVHNCLVNSQSFRDGDYEQAFRDAYAEADDIVIEK----CEKSGSTGVSALLVGNKLYTANVGDSEIVLARAQPNANPKGPVTYEPVLLSYKHLASDDQEKKRVTDLGGMIIFN---RLFGSLAVSRSFGDKEYKEGEKKFCVSDPYQTTTDLTARDHFFILACDGLWDKVEYDEAV 932          
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: PPM1K_HUMAN (Protein phosphatase 1K, mitochondrial OS=Homo sapiens GN=PPM1K PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.152e-21
Identity = 79/218 (36.24%), Postives = 115/218 (52.75%), Query Frame = 3
Query:   30 GYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHL----FENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILV-GNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMW--AGTWRVGGVLAMSRAFGNRMLK-QFVVAEPEIQDLEV---DEGFELLVLASDGLWDVVPNED 650
            G +S  GKR   ED +D      +   V  F V+DGHGG  AA++   H+     + L K     T   LA  E  +        S   T    G+TA+ A+L  G  L VA+VGDSR ++ + GK + L+ DH P R DE++RI+  GG V W   G   V G LAM+R+ G+  LK   V+AEPE + +++   D+ F  LVL +DG+  +V +++
Sbjct:   96 GCASQIGKRKENEDRFDFAQLTDE---VLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSF--LVLTTDGINFMVNSQE 308          
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: P2C18_ORYSJ (Probable protein phosphatase 2C 18 OS=Oryza sativa subsp. japonica GN=Os02g0599200 PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 3.671e-21
Identity = 75/278 (26.98%), Postives = 121/278 (43.53%), Query Frame = 3
Query:    3 KSEDGKLRCGYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRD---------------------------------DGSTASTAILVGNHLYVANVGDSRTVISK-AGKAIPLSEDHKPNRCD-ERKRIENAGGVVMWAGTWRV---------------GGVLAMSRAFGNRMLKQ---------FVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVA 659
            + E+ +++   SS +G    MED +    S  D  +   FGV+DGHGG+  A Y  +     L  H  +  D   A+   +   D +  +S  D +R+                                 +GSTA   ++ G+ + V + GDSR V+S+  G AI LS DHKP   + ER+R++NAGG+ +     +V               G  + +SR+ G+   KQ          ++ +P+I   ++    E LV+AS GLW  + + D VA
Sbjct:  122 EEENDRIKYIVSSMQGLGHKMEDAHAAILSLDDTTSTSFFGVYDGHGGAEVASYCAKRFHIELCNHEDYHNDLTNALDNVFFSMDENLQQS--DAWRELVIPRDNGWMYFLKAGVCANFWPFPQAYTGPAYEGSTACVVVIRGDQMIVGHAGDSRCVLSRQGGLAIDLSSDHKPRTSESERERVQNAGGISLGVDCEKVMENYVIKEQWILGYFGESVTISRSIGDFAFKQNKDLNREEQMLICDPDIHTHDITGDMEFLVIASQGLWSCMESADVVA 397          
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: P2C16_ORYSJ (Probable protein phosphatase 2C 16 OS=Oryza sativa subsp. japonica GN=Os02g0598400 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.262e-21
Identity = 84/276 (30.43%), Postives = 129/276 (46.74%), Query Frame = 3
Query:    3 KSEDGKLRCGYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTD-------TKLAISETYQQTD-------------VDFLES-------ERDTYRD---DGSTASTAILVGNHLYVANVGDSRTVISK-AGKAIPLSEDHKP--NRCDERKRIENAGGVVMWAGTWRV---------------GGVLAMSRAFG------NRML---KQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVA 659
            + E+ +++   SS +G    MED +    +  D  +   FGV+DGHGG+  A Y  +     L  H  +  D         L++ E  QQ+D             + FL++        + TY     +GSTA   ++ GN + V +VGDSR V+S+  G AI LS DHKP      ER+R++NAGG  +     +V               GG + +SR+ G      N+ L   KQ +V +P+I   ++ +  E LV+AS GLW  V + D V+
Sbjct:   14 EEENDRIKYVVSSMQGWGEKMEDAHAAILNLDDATSTSFFGVYDGHGGAEVALYCAKQFHIELCNHEDYHNDLINALDNVFLSMDENLQQSDAWRELVIPHDNGCMYFLKAGVCAKPFPQATYTGPAYEGSTACVVVIRGNQMIVGHVGDSRCVLSRQGGLAIDLSFDHKPCTRTESERERVQNAGGRSLGLRCEQVMGNYVVKEQWVLGDFGGGVTISRSIGDFAFKKNKDLDREKQMLVCDPDILADDITDDMEFLVIASQGLWSCVDSADVVS 289          
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: PPM1K_XENLA (Protein phosphatase 1K, mitochondrial OS=Xenopus laevis GN=ppm1k PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.178e-21
Identity = 81/230 (35.22%), Postives = 119/230 (51.74%), Query Frame = 3
Query:   24 RCGYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAE--------YLKEHLFEN------LLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILV-GNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMW--AGTWRVGGVLAMSRAFGNRMLKQF-VVAEPEIQDLEV---DEGFELLVLASDGLWDVVPNED 650
            + G S+  GKR   ED + +     D   +  F V+DGHGG+ AAE        Y+KE L E       L+K   F+   K      +   D   L          G+TA+ A+L  G  L VA+VGDSR ++ + GK   L+ DH P R +E+ RI+ +GG V W   G   V G LAM+R+ G+  LK   V+AEPE + +++   D+GF  LVL +DG+  +V +++
Sbjct:   95 KVGCSTQLGKRKENEDRFKLARLTPD---ILYFAVYDGHGGASAAEFCDRFMEDYIKEFLVEEHDMEKVLVK--AFLEINKAFARHAHLSVDASLLTC--------GTTATVALLRDGIELVVASVGDSRALLCRRGKPFKLTIDHTPERKEEKLRIKKSGGFVTWNSLGQPNVNGRLAMTRSIGDLDLKSMGVIAEPETKRVKLQHTDDGF--LVLTTDGINFIVNSQE 309          
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: PPM1G_MACFA (Protein phosphatase 1G OS=Macaca fascicularis GN=PPM1G PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.178e-21
Identity = 59/149 (39.60%), Postives = 87/149 (58.39%), Query Frame = 3
Query:  237 ETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLK---------QFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAV 656
            E  ++  V  +E + +   D G+TA  A++ G  L VAN GDSR V+S+AGKA+ +S DHKP    E  RI+NAGG V   G  RV G L +SRA G+   K         Q + A P+I+ L + +  E +V+A DG+W+V+ +++ V
Sbjct:  308 EEEEEMMVPGMEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDG--RVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVV 454          
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: PPM1G_HUMAN (Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.178e-21
Identity = 59/149 (39.60%), Postives = 87/149 (58.39%), Query Frame = 3
Query:  237 ETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLK---------QFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAV 656
            E  ++  V  +E + +   D G+TA  A++ G  L VAN GDSR V+S+AGKA+ +S DHKP    E  RI+NAGG V   G  RV G L +SRA G+   K         Q + A P+I+ L + +  E +V+A DG+W+V+ +++ V
Sbjct:  307 EEEEEMMVPGMEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDG--RVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVV 453          
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: P2C41_ARATH (Probable protein phosphatase 2C 41 OS=Arabidopsis thaliana GN=At3g16800 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.068e-20
Identity = 82/254 (32.28%), Postives = 123/254 (48.43%), Query Frame = 3
Query:    6 SEDGKLRCGYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHG--GSRAAEYLKEHLFENLLKHPQFMTDT--------------KLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGK------AIPLSEDHKPNRCDERKRIENAGGVVMW----AGTWRVGGV------LAMSRAFGNRMLKQF-VVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR 668
            SE  K      S RG++   +D   +       + +   G+FDGHG  G   A+ +K+    +LL   Q    +              K A  +T+   D+D   S        G TA TA+L G+HL +AN GDSR VI+           + LS D KPN  +E +RI+ + G +       G +RVG        LA+SRAFG+  LK F +V+EPE+   ++ +  + L+LA+DG+WDV+ N +AV + R
Sbjct:   56 SESSKRFTSICSNRGEKGINQDRAIVWEGFGCQEDITFCGMFDGHGPWGHVIAKRVKKSFPSSLLCQWQQTLASLSSSPECSSPFDLWKQACLKTFSIIDLDLKISPSIDSYCSGCTALTAVLQGDHLVIANAGDSRAVIATTSDDGNGLVPVQLSVDFKPNIPEEAERIKQSDGRLFCLDDEPGVYRVGMPNGGSLGLAVSRAFGDYCLKDFGLVSEPEVTYRKITDKDQFLILATDGMWDVMTNNEAVEIVR 309          
The following BLAST results are available for this feature:
BLAST of FC875579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 191
Match NameE-valueIdentityDescription
P2C20_ORYSJ7.397e-2227.17Probable protein phosphatase 2C 20 OS=Oryza sativa... [more]
PPM1G_MOUSE1.648e-2139.10Protein phosphatase 1G OS=Mus musculus GN=Ppm1g PE... [more]
SPNA_DICDI2.152e-2130.96Protein spalten OS=Dictyostelium discoideum GN=spn... [more]
PPM1K_HUMAN2.152e-2136.24Protein phosphatase 1K, mitochondrial OS=Homo sapi... [more]
P2C18_ORYSJ3.671e-2126.98Probable protein phosphatase 2C 18 OS=Oryza sativa... [more]
P2C16_ORYSJ6.262e-2130.43Probable protein phosphatase 2C 16 OS=Oryza sativa... [more]
PPM1K_XENLA8.178e-2135.22Protein phosphatase 1K, mitochondrial OS=Xenopus l... [more]
PPM1G_MACFA8.178e-2139.60Protein phosphatase 1G OS=Macaca fascicularis GN=P... [more]
PPM1G_HUMAN8.178e-2139.60Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE... [more]
P2C41_ARATH1.068e-2032.28Probable protein phosphatase 2C 41 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC31405E04EF CTVClemen1 Citrus clementina cDNA clone C31405E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875579 ID=FC875579; Name=FC875579; organism=Citrus clementina; type=EST; length=670bp
GGAAAAGTGAAGATGGAAAACTGAGATGTGGATACTCAAGTTTTAGGGGA
AAGAGGGCAACTATGGAGGATTTCTATGACATTAAAACTTCCAATGTTGA
TGGGCAAGCTGTCTGCATGTTTGGAGTCTTTGATGGTCATGGTGGTTCCC
GTGCGGCTGAGTATTTGAAGGAGCACCTCTTTGAGAATCTCTTGAAGCAT
CCACAATTTATGACAGACACCAAATTGGCTATAAGTGAAACATATCAACA
GACTGATGTCGACTTTTTGGAATCTGAAAGAGATACTTACAGGGATGATG
GTTCTACTGCTTCAACGGCTATATTGGTTGGTAACCATCTATATGTTGCC
AATGTCGGAGATTCTAGGACTGTAATATCCAAGGCTGGTAAAGCAATTCC
TCTTTCTGAGGATCATAAACCCAACAGATGTGATGAGCGGAAGAGAATTG
AAAATGCCGGAGGCGTTGTAATGTGGGCAGGCACTTGGAGAGTAGGAGGT
GTGCTAGCTATGTCTCGTGCTTTTGGTAACCGCATGCTGAAGCAATTTGT
CGTTGCGGAACCTGAGATCCAGGACCTTGAAGTAGATGAAGGATTTGAGC
TGCTTGTGCTTGCAAGTGATGGACTATGGGATGTAGTACCCAATGAGGAT
GCTGTTGCACTTGCCCGAAC
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