FC875580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBE2T_BOVIN (Ubiquitin-conjugating enzyme E2 T OS=Bos taurus GN=UBE2T PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.255e-19 Identity = 53/149 (35.57%), Postives = 79/149 (53.02%), Query Frame = 2 Query: 245 QLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKD----WNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAKPK 679 +L +EL L PP GI + D + A I G A TPYE GVF++++ + +P PP+ FLT I+HPNI + G IC++ LK W PSL + +L ++ L+ EP P+ L N + ++AR +T HA+ K Sbjct: 6 RLKRELSLLAAEPPPGITCWQDGDRMEDLRAQILGGANTPYEKGVFKLEVHIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATLLTCIQQLMAEPNPDDPLMADISSEFKYNKPVFFKNARQWTEKHARQK 154
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.945e-19 Identity = 51/143 (35.66%), Postives = 78/143 (54.55%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 K++ KEL + PP G D+ + I GP G+ YE GVF + + S ++P PPK F T+I+H NI + G IC++ LK +W+P+L + VL+ + LL + P L L+N EE+ R AR++T +A Sbjct: 89 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQNREEHDRIARLWTKRYA 231
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC37_ARATH (Probable ubiquitin carrier protein E2 37 OS=Arabidopsis thaliana GN=UBC37 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.567e-19 Identity = 60/158 (37.97%), Postives = 79/158 (50.00%), Query Frame = 2 Query: 245 QLAKELKSLDESPPEGIKV--------GVND-DDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTL----KKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAKPK 679 ++ KELK L PP G G D FSTI A IEGP T Y NG+F +K+ + +P PP F T I+HPNI +G IC++ L K W PSL + VL +R LL EP P+ L + + N + + AR T +AK K Sbjct: 10 RMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLSEPNPDDGLMCEVSREYKYNRQTFDYKAREMTEKYAKVK 167
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC2_CANAL (Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans GN=UBC2 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.119e-18 Identity = 41/136 (30.15%), Postives = 77/136 (56.62%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 649 ++L ++ K + + PP G+ D+ A I GP+ TP+E+G FR+ L +P+ PP+ F++++FHPN+ +GE+C++ L+ W+P+ + +L V+ LL +P S N +A + ++ Y + R Sbjct: 7 RRLMRDFKRMQQDPPSGVSASPLPDNVMKWNAVIIGPSDTPFEDGTFRLLLSFDEQYPNKPPQVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSVQSLLNDPNISSPANVEAANLYKDHRSLYVKRVR 142
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UB2E1_MOUSE (Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.119e-18 Identity = 53/159 (33.33%), Postives = 81/159 (50.94%), Query Frame = 2 Query: 194 SFVDMATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 S V M+ N L K++ KEL + PP G D+ + I GP G+ YE GVF + + + ++P PPK F T+I+H NI + G IC++ LK +W+P+L + VL+ + LL + P L + N E+ R AR +T +A Sbjct: 34 SKVSMSKNSKLLSTSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 192
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UB2E1_HUMAN (Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.119e-18 Identity = 53/159 (33.33%), Postives = 81/159 (50.94%), Query Frame = 2 Query: 194 SFVDMATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 S V M+ N L K++ KEL + PP G D+ + I GP G+ YE GVF + + + ++P PPK F T+I+H NI + G IC++ LK +W+P+L + VL+ + LL + P L + N E+ R AR +T +A Sbjct: 34 SKVSMSKNSKLLSTSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 192
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBE2C_DICDI (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum GN=ube2c PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.461e-18 Identity = 52/136 (38.24%), Postives = 72/136 (52.94%), Query Frame = 2 Query: 233 NVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYAR 640 +V K+L EL +L P GI + D+ I+G T YE F+M L D+P+ PP F T+ FHPN+ NG IC++ LK W+P +R +LI ++ LL EP ES LN A L N +EY + Sbjct: 6 SVSKRLQSELMNLMMGPSPGISAFPDGDNIFNWIGTIQGAKDTVYEQMEFKMSLKFPTDYPYKPPTVKFETQCFHPNVDNNGNICLDILKDKWSPVYNVRSLLISIQSLLGEPNNESPLNSYAAS-LWSNQDEYKK 140
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBCB_DICDI (Ubiquitin conjugating enzyme E2 B OS=Dictyostelium discoideum GN=ubcB PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.909e-18 Identity = 48/145 (33.10%), Postives = 79/145 (54.48%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIAT-NGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAK 673 K+L KE+ + ++PP + DD+ A ++GP G+P+E GVF M + + D+P PP F TKI+HPNI T +G IC W+P L + VL +R +L +P P++ L + + + + + A+ +T +AK Sbjct: 5 KRLQKEITDMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEVF-STWSPQLKILDVLTTIRSILTDPNPDNPLETEIAQQFKTDRNAFNKTAKEWTKKYAK 148
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC2_DEBHA (Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces hansenii GN=UBC2 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.909e-18 Identity = 40/136 (29.41%), Postives = 77/136 (56.62%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 649 ++L ++ K + + P G+ D+ + A I GPA TP+E+G FR+ L +P+ PP F++++FHPN+ +GE+C++ L+ W+P+ + +L ++ LL +P S N +A + ++ +Y + R Sbjct: 7 RRLMRDFKRMQQDAPSGVSASPLPDNVMSWNAVIIGPADTPFEDGTFRLILQFDEQYPNKPPSVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSIQSLLNDPNISSPANVEAANLYKDHRSQYIKRVR 142
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC12_ARATH (Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana GN=UBC12 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.909e-18 Identity = 48/144 (33.33%), Postives = 78/144 (54.17%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVG-VNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 K++++EL+ + PP G V ++D A I GP +PY GVF + + S D+P PPK F TK++HPNI + G IC++ LK+ W+P+ VL+ + LL +P P L + + + +Y A+ +T +A Sbjct: 4 KRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPLVPEIAHLYKVDKSKYESTAQKWTQKYA 147 The following BLAST results are available for this feature:
BLAST of FC875580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 219
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875580 ID=FC875580; Name=FC875580; organism=Citrus clementina; type=EST; length=706bpback to top |