FC875580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UB2E3_MOUSE (Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.493e-18 Identity = 57/173 (32.95%), Postives = 87/173 (50.29%), Query Frame = 2 Query: 152 Q*QRKRRAITRILSSFVDMATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 Q +RK A + ++ + T L + K++ KEL + PP G D+ + I GP G+ YE GVF + + S D+P PPK F T+I+H NI + G IC++ LK +W+P+L + VL+ + LL + P L L N E+ R AR +T +A Sbjct: 35 QEERKPSATQQKKNTKLSSKTTAKLSTSA-KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UB2E3_HUMAN (Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.493e-18 Identity = 57/173 (32.95%), Postives = 87/173 (50.29%), Query Frame = 2 Query: 152 Q*QRKRRAITRILSSFVDMATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 Q +RK A + ++ + T L + K++ KEL + PP G D+ + I GP G+ YE GVF + + S D+P PPK F T+I+H NI + G IC++ LK +W+P+L + VL+ + LL + P L L N E+ R AR +T +A Sbjct: 35 QEERKPSATQQKKNTKLSSKTTAKLSTSA-KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UB2E3_BOVIN (Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.493e-18 Identity = 57/173 (32.95%), Postives = 87/173 (50.29%), Query Frame = 2 Query: 152 Q*QRKRRAITRILSSFVDMATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 Q +RK A + ++ + T L + K++ KEL + PP G D+ + I GP G+ YE GVF + + S D+P PPK F T+I+H NI + G IC++ LK +W+P+L + VL+ + LL + P L L N E+ R AR +T +A Sbjct: 35 QEERKPSATQQKKNTKLSSKTTAKLSTSA-KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UB2E2_MOUSE (Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.553e-18 Identity = 50/143 (34.97%), Postives = 75/143 (52.45%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 K++ KEL + PP G D+ + I GP G+ YE GVF + + S D+P PPK F T+I+H NI + G IC++ LK +W+P+L + VL+ + LL + P L + N E+ R AR +T +A Sbjct: 58 KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 200
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UB2E2_HUMAN (Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.553e-18 Identity = 50/143 (34.97%), Postives = 75/143 (52.45%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 K++ KEL + PP G D+ + I GP G+ YE GVF + + S D+P PPK F T+I+H NI + G IC++ LK +W+P+L + VL+ + LL + P L + N E+ R AR +T +A Sbjct: 58 KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 200
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC2_DICDI (Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum GN=ubc2 PE=3 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18 Identity = 42/136 (30.88%), Postives = 74/136 (54.41%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 649 ++L ++ K L PP GI +++ A I GP + +E F++ L S ++P+ P FL+K+FHPN+ +G IC++ L+ W+P + +L ++ LL +P P S N ++ ++ EN EY R + Sbjct: 7 RRLMRDFKRLQSDPPAGISGAPLENNILMWQAVIFGPDDSIWEGATFKLSLQFSEEYPNDAPTVKFLSKMFHPNVYADGSICLDILQNQWSPIYDIAAILTSIQSLLCDPNPNSPANSESARLFRENKREYNRKVK 142
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC1_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC1 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.237e-17 Identity = 46/145 (31.72%), Postives = 83/145 (57.24%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVG-VNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIAT-NGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 K++ KE++++ + P I + V++ D + GP GTPYE G F + + + ++P PPK F TK++HPNI++ G IC++ LK W+P + L+ LI ++ LL P P + + + L + E + + A ++T ++A Sbjct: 5 KRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYA 149
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UB2R1_MOUSE (Ubiquitin-conjugating enzyme E2 R1 OS=Mus musculus GN=Cdc34 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.110e-17 Identity = 59/164 (35.98%), Postives = 82/164 (50.00%), Query Frame = 2 Query: 224 LPPNVIKQLAKELKSLDESPPEGIKVGVNDD-DFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTL-------------KKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAK 673 L P+ K L ELK L E P EG +V + D+ D I GP T YE G F+ +L D+P+SPP FLTK++HPNI G++C++ L + WNP+ +R +L+ V LL EP S N A ++ ++E R YT I K Sbjct: 5 LVPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDA-SVMYRKWKESKGKDREYTDIIRK 167
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UB2R1_HUMAN (Ubiquitin-conjugating enzyme E2 R1 OS=Homo sapiens GN=CDC34 PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.110e-17 Identity = 59/164 (35.98%), Postives = 82/164 (50.00%), Query Frame = 2 Query: 224 LPPNVIKQLAKELKSLDESPPEGIKVGVNDD-DFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTL-------------KKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAK 673 L P+ K L ELK L E P EG +V + D+ D I GP T YE G F+ +L D+P+SPP FLTK++HPNI G++C++ L + WNP+ +R +L+ V LL EP S N A ++ ++E R YT I K Sbjct: 5 LVPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDA-SVMYRKWKESKGKDREYTDIIRK 167
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC21_ARATH (Probable ubiquitin carrier protein E2 21 OS=Arabidopsis thaliana GN=UBC21 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.756e-17 Identity = 52/144 (36.11%), Postives = 83/144 (57.64%), Query Frame = 2 Query: 254 KELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNI-ATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLE-NYEEYARHARIYTGIHAKPK 679 KE++ + P+ I++ +D + A I+GP+ TPYE GVF++ + +P PP+ FLTKIFHPN+ GEIC++ LK W+P+ L+ V + L+ P P+S LN +G +L + + A++YT + A PK Sbjct: 13 KEVQREKVADPD-IQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPK 155 The following BLAST results are available for this feature:
BLAST of FC875580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 219
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875580 ID=FC875580; Name=FC875580; organism=Citrus clementina; type=EST; length=706bpback to top |