FC875580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC9_XENLA (SUMO-conjugating enzyme UBC9 OS=Xenopus laevis GN=ube2i PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16 Identity = 45/144 (31.25%), Postives = 81/144 (56.25%), Query Frame = 2 Query: 239 IKQLAKELKSLDESPPEG-IKVGVNDDDFSTIFAD----IEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLK--KDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 649 + +LA+E K+ + P G + V + D + + I G GTP+E G+F++++L D+P SPPK F +FHPN+ +G +C++ L+ KDW P++ ++ +L+ ++ LL EP + +A + +N EY + R Sbjct: 6 LSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVR 149
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC9_SPETR (SUMO-conjugating enzyme UBC9 OS=Spermophilus tridecemlineatus GN=UBE2I PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16 Identity = 45/144 (31.25%), Postives = 81/144 (56.25%), Query Frame = 2 Query: 239 IKQLAKELKSLDESPPEG-IKVGVNDDDFSTIFAD----IEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLK--KDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 649 + +LA+E K+ + P G + V + D + + I G GTP+E G+F++++L D+P SPPK F +FHPN+ +G +C++ L+ KDW P++ ++ +L+ ++ LL EP + +A + +N EY + R Sbjct: 6 LSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVR 149
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC9_RAT (SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus GN=Ube2i PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16 Identity = 45/144 (31.25%), Postives = 81/144 (56.25%), Query Frame = 2 Query: 239 IKQLAKELKSLDESPPEG-IKVGVNDDDFSTIFAD----IEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLK--KDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 649 + +LA+E K+ + P G + V + D + + I G GTP+E G+F++++L D+P SPPK F +FHPN+ +G +C++ L+ KDW P++ ++ +L+ ++ LL EP + +A + +N EY + R Sbjct: 6 LSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVR 149
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC9_MOUSE (SUMO-conjugating enzyme UBC9 OS=Mus musculus GN=Ube2i PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16 Identity = 45/144 (31.25%), Postives = 81/144 (56.25%), Query Frame = 2 Query: 239 IKQLAKELKSLDESPPEG-IKVGVNDDDFSTIFAD----IEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLK--KDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 649 + +LA+E K+ + P G + V + D + + I G GTP+E G+F++++L D+P SPPK F +FHPN+ +G +C++ L+ KDW P++ ++ +L+ ++ LL EP + +A + +N EY + R Sbjct: 6 LSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVR 149
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC9_HUMAN (SUMO-conjugating enzyme UBC9 OS=Homo sapiens GN=UBE2I PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16 Identity = 45/144 (31.25%), Postives = 81/144 (56.25%), Query Frame = 2 Query: 239 IKQLAKELKSLDESPPEG-IKVGVNDDDFSTIFAD----IEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLK--KDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 649 + +LA+E K+ + P G + V + D + + I G GTP+E G+F++++L D+P SPPK F +FHPN+ +G +C++ L+ KDW P++ ++ +L+ ++ LL EP + +A + +N EY + R Sbjct: 6 LSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVR 149
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC9_CHICK (SUMO-conjugating enzyme UBC9 OS=Gallus gallus GN=UBE2I PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16 Identity = 45/144 (31.25%), Postives = 81/144 (56.25%), Query Frame = 2 Query: 239 IKQLAKELKSLDESPPEG-IKVGVNDDDFSTIFAD----IEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLK--KDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 649 + +LA+E K+ + P G + V + D + + I G GTP+E G+F++++L D+P SPPK F +FHPN+ +G +C++ L+ KDW P++ ++ +L+ ++ LL EP + +A + +N EY + R Sbjct: 6 LSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVR 149
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC9B_DANRE (SUMO-conjugating enzyme UBC9-B OS=Danio rerio GN=ube2ib PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16 Identity = 45/144 (31.25%), Postives = 81/144 (56.25%), Query Frame = 2 Query: 239 IKQLAKELKSLDESPPEG-IKVGVNDDDFSTIFAD----IEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLK--KDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 649 + +LA+E K+ + P G + V + D + + I G GTP+E G+F++++L D+P SPPK F +FHPN+ +G +C++ L+ KDW P++ ++ +L+ ++ LL EP + +A + +N EY + R Sbjct: 6 LSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVR 149
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC1_MIMIV (Probable ubiquitin-conjugating enzyme E2 L460 OS=Acanthamoeba polyphaga mimivirus GN=UBC PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16 Identity = 43/130 (33.08%), Postives = 72/130 (55.38%), Query Frame = 2 Query: 287 EGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKD-WNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAK 673 + ++ + D++ +I+GP + YEN F +++ LS+D+P+S PK F+T I H N+ G+IC+N LKKD WN SL + ++ + LL +P PE N + + + Y + R Y H+K Sbjct: 25 DSFQINMVDENIFLWKVNIKGPENSLYENYNFELEIELSNDYPYSSPKVKFITPIQHMNVNDKGDICLNILKKDGWNASLNIISIIWSIIVLLDQPNPEDPFNSELASLYRNDKLSYDKKIRDYCKTHSK 154
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC12_YEAST (NEDD8-conjugating enzyme UBC12 OS=Saccharomyces cerevisiae GN=UBC12 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15 Identity = 53/156 (33.97%), Postives = 78/156 (50.00%), Query Frame = 2 Query: 215 NEN---LPPNVIK---QLAKELKSLDESPPEGIKVGVNDDDF----STIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARI 652 NEN + PN+ +L ++L SLD P + V + D S I P Y G L + +P PPK L KIFHPNI G +C+N L++DW+P+L L+ ++ + L +EP P LN+ A K+L E +E+A R+ Sbjct: 15 NENSSSIQPNLSAARIRLKRDLDSLDLPPTVTLNVITSPDSADRSQSPKLEVIVRPDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVRL 170
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC_ASFP4 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) GN=UBC PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15 Identity = 44/132 (33.33%), Postives = 74/132 (56.06%), Query Frame = 2 Query: 236 VIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKD--------WNPSLGLRHVLIVVRCLLIEPFPESALNEQAGK 607 V + L E + L E+P E KV VN+++ + ++GPA T YE G+F+ K+ ++P+ PP+ F ++++HPNI ++G +C++ L D W+P + +L+ V LL EP +S N A K Sbjct: 2 VSRFLMAEYRHLTENPSENFKVSVNENNMTEWDVILKGPADTLYEGGLFKAKIGFPPNYPYEPPRLTFTSEMWHPNIYSDGRVCISILHGDNAEEQGMTWSPVQKIDTILLSVISLLNEPNTDSPANVDAAK 133 The following BLAST results are available for this feature:
BLAST of FC875580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 219
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875580 ID=FC875580; Name=FC875580; organism=Citrus clementina; type=EST; length=706bpback to top |