FC875580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC9_PAGMA (SUMO-conjugating enzyme UBC9 OS=Pagrus major GN=ube2i PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15 Identity = 46/145 (31.72%), Postives = 81/145 (55.86%), Query Frame = 2 Query: 239 IKQLAKELKSLDESPPEGIKVGV---NDDDFSTIF---ADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLK--KDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 649 + +LA+E K+ + P G+ V V N D + I G GTP+E G+F++++L D+P SPPK F +FHPN+ +G +C++ L+ KDW P++ ++ +L+ ++ LL EP + +A + ++ EY + R Sbjct: 6 LSRLAQERKAWRKDHPLGL-VAVPTKNPDGTMNLMNGECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIFCQDRTEYEKRVR 149
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC20_ARATH (Ubiquitin carrier protein E2 20 OS=Arabidopsis thaliana GN=UBC20 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15 Identity = 48/136 (35.29%), Postives = 71/136 (52.21%), Query Frame = 2 Query: 233 NVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYAR 640 +V+K+L EL L GI +D+ I G T +E +R+ L S+D+P PPK F T FHPN+ G IC++ L+ W+ + +R +L+ ++ LL EP S LN QA + L N EEY + Sbjct: 35 SVLKRLQSELMGLMMGGGPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQ-LWSNQEEYRK 169
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC12_SCHPO (NEDD8-conjugating enzyme ubc12 OS=Schizosaccharomyces pombe GN=ubc12 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15 Identity = 35/95 (36.84%), Postives = 58/95 (61.05%), Query Frame = 2 Query: 365 YENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 649 Y+ G F+ ++ + ++PH PPK L KI+HPNI G +C+N L++DWNP L L +L+ ++ L + P E LN++A L ++ + +A R Sbjct: 65 YKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWNPVLNLNSILVGLQFLFLSPNAEDPLNKEAAADLHKDPQGFASRVR 159
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBE2C_DROME (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.400e-15 Identity = 46/136 (33.82%), Postives = 72/136 (52.94%), Query Frame = 2 Query: 236 VIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARH 643 V K+L KEL +L + GI + ++ I GP T Y +R+ L + +P++ P FLT FHPN+ G IC++ LK W+ +R +L+ ++ LL EP ES LN QA M+ + +EY ++ Sbjct: 33 VSKRLHKELMNLMMANERGISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKFLTSCFHPNVDLQGAICLDILKDKWSALYDVRTILLSIQSLLGEPNNESPLNAQAA-MMWNDQKEYKKY 167
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UE2NL_HUMAN (Putative ubiquitin-conjugating enzyme E2 N-like OS=Homo sapiens GN=UBE2NL PE=5 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15 Identity = 45/143 (31.47%), Postives = 77/143 (53.85%), Query Frame = 2 Query: 245 QLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPA-GTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 ++ KE + L P GIK ++ + I G + +P+E G F+ +LLL+ ++P + PK F+TKI+HPN+ I ++ LK W+P+L +R VL+ ++ LL P P+ L + N + AR +T ++A Sbjct: 7 RIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGESKDSPFEGGTFKRELLLAEEYPMAAPKVRFMTKIYHPNVDKLERISLDILKDKWSPALQIRTVLLSIQALLNAPNPDDPLANDVVEQWKTNEAQAIETARAWTRLYA 149
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBE2C_XENLA (Ubiquitin-conjugating enzyme E2 C OS=Xenopus laevis GN=ube2c PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15 Identity = 46/137 (33.58%), Postives = 75/137 (54.74%), Query Frame = 2 Query: 233 NVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARH 643 +V K+L +EL +L S +GI D+ I+G GT YE+ +++ L +P++ P F+T FHPN+ ++G IC++ LK W+ +R +L+ ++ LL EP ES LN A + L +N Y +H Sbjct: 30 SVGKRLQQELMTLMMSGDKGISAFPESDNLFKWIGTIDGAVGTVYEDLRYKLSLEFPSGYPYNAPTVKFVTPCFHPNVDSHGNICLDILKDKWSALYDVRTILLSLQSLLGEPNNESPLNPYAAE-LWQNQTAYKKH 165
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC19_ARATH (Ubiquitin carrier protein E2 19 OS=Arabidopsis thaliana GN=UBC19 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15 Identity = 49/147 (33.33%), Postives = 76/147 (51.70%), Query Frame = 2 Query: 233 NVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHA-RIYTGIHA 670 +V+K+L EL L GI +D+ I G T +E +R+ L S+D+P PK F T FHPN+ G IC++ L+ W+ + +R +L+ ++ LL EP S LN QA + L N EEY + ++Y ++A Sbjct: 36 SVLKRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQ-LWSNQEEYRKMVEKLYKPLNA 181
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC9_MESAU (SUMO-conjugating enzyme UBC9 OS=Mesocricetus auratus GN=UBE2I PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15 Identity = 45/144 (31.25%), Postives = 79/144 (54.86%), Query Frame = 2 Query: 239 IKQLAKELKSLDESPPEG-IKVGVNDDDFSTIFAD----IEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLK--KDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 649 + +LA+E K+ + P G + V + D + + I G GTP+E G+F++++L D+P SPPK F +FHPN+ +G +C++ L+ KDW P++ + + I ++ LL EP + +A + +N EY + R Sbjct: 6 LSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITINQLFIGIQELLNEPNIQEPAQAEAYTIYCQNRVEYEKRFR 149
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBCX_DICDI (Ubiquitin-conjugating enzyme E2 pex4 OS=Dictyostelium discoideum GN=pex4 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.802e-15 Identity = 53/144 (36.81%), Postives = 77/144 (53.47%), Query Frame = 2 Query: 245 QLAKELKSLDESPPEGIKVGVNDD-DFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNI-ATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLE-NYEEYARHARIYTGIH 667 +L KE K L E I + D+ D A I+GP TPYENG F + + + ++P PP F+TKIFHPNI GEIC++ LK W+ L+ V + LL P +S LN AG ++ + + + AR+YT ++ Sbjct: 4 RLMKEYKVLQNEEFEDILLYPRDESDLYRWVAIIKGPPDTPYENGKFELDISVPTNYPLQPPTIKFVTKIFHPNIHFKTGEICLDLLKTSWSAIYTLQSVCRSIIALLSLPEADSPLNCDAGNLIRNGDVKGHDSLARMYTRLY 147
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC12_DROME (NEDD8-conjugating enzyme Ubc12 OS=Drosophila melanogaster GN=CG7375 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14 Identity = 32/95 (33.68%), Postives = 57/95 (60.00%), Query Frame = 2 Query: 365 YENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 649 Y +G F + ++PH PPK T+++HPNI +G +C+N L++DWNP L + ++ ++ L +EP PE LN++A +L N ++ + + Sbjct: 68 YRDGRFVFNFRVGSNYPHEPPKVKCATQVYHPNIDLDGNVCLNILREDWNPVLNINSIVYGLQFLFLEPNPEDPLNKEAADVLQTNRRQFENNVK 162 The following BLAST results are available for this feature:
BLAST of FC875580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 219
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875580 ID=FC875580; Name=FC875580; organism=Citrus clementina; type=EST; length=706bpback to top |