FC875580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC11_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC11 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14 Identity = 46/136 (33.82%), Postives = 72/136 (52.94%), Query Frame = 2 Query: 236 VIKQLAKELKSLDESPPEGIKV-GVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYAR 640 V K+L EL L S E I V+D+D + I GP TPY F++ L ++P PP FL+ ++HPN+ +G IC++ LK+ W+ + +L+ ++ LL EP S LN A ++ + EEY + Sbjct: 9 VTKRLQNELLQLLSSTTESISAFPVDDNDLTYWVGYITGPKDTPYSGLKFKVSLKFPQNYPFHPPMIKFLSPMWHPNVDKSGNICLDILKEKWSAVYNVETILLSLQSLLGEPNNRSPLNAVAAELWDADMEEYRK 144
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBE2C_HUMAN (Ubiquitin-conjugating enzyme E2 C OS=Homo sapiens GN=UBE2C PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 42/123 (34.15%), Postives = 68/123 (55.28%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKM 610 K+L +EL +L S +GI D+ I G AGT YE+ +++ L +P++ P FLT +HPN+ T G IC++ LK+ W+ +R +L+ ++ LL EP +S LN A ++ Sbjct: 33 KRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAEL 155
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC12_CANGA (NEDD8-conjugating enzyme UBC12 OS=Candida glabrata GN=UBC12 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 48/165 (29.09%), Postives = 84/165 (50.91%), Query Frame = 2 Query: 158 QRKRRAITRILSSFVDMATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARI 652 Q+K++ + + S V TN P + +L K+++ L+ P + + D+ I P Y+ G FR +P PPK KIFHPNI +G+IC+N L++DW+P+L L+ +++ + L EP LN++A ++L ++ E+ R+ Sbjct: 9 QQKQQQLAKNAGSSVKANTNSTSPAKL--RLQKDIEELELPPTVRVNIISLDNHKEMSLNIIIIPDEGFYKGGKFRFTATFLETYPIDPPKVICNNKIFHPNIDPHGKICLNILREDWSPALDLQCIVLGLLSLFQEPNGNDPLNKEAAEVLNKDKLEFGNLVRL 171
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBE2C_MACFA (Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis GN=UBE2C PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14 Identity = 42/123 (34.15%), Postives = 67/123 (54.47%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKM 610 K+L +EL +L S +GI D+ I G AGT YE+ +++ L +P++ P FLT +HPN+ T G IC++ LK W+ +R +L+ ++ LL EP +S LN A ++ Sbjct: 33 KRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAEL 155
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBE2C_BOVIN (Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14 Identity = 42/123 (34.15%), Postives = 67/123 (54.47%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKM 610 K+L +EL +L S +GI D+ I G AGT YE+ +++ L +P++ P FLT +HPN+ T G IC++ LK W+ +R +L+ ++ LL EP +S LN A ++ Sbjct: 33 KRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAEL 155
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC7_CAEEL (Probable ubiquitin-conjugating enzyme E2 7 OS=Caenorhabditis elegans GN=ubc-7 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14 Identity = 47/145 (32.41%), Postives = 71/145 (48.97%), Query Frame = 2 Query: 248 LAKELKSLDESPPEGIKVG-VNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTL-------------KKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYAR 640 L K+L + P +G G V+D+D + GP T YE G F+ L D+P PPK F+++I+HPNI G +C++ L ++ W P + +L+ V +L +P ES N A KM ENY E+ + Sbjct: 8 LKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAKMQRENYAEFKK 152
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC9_CAEEL (SUMO-conjugating enzyme UBC9 OS=Caenorhabditis elegans GN=ubc-9 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14 Identity = 46/142 (32.39%), Postives = 75/142 (52.82%), Query Frame = 2 Query: 245 QLAKELKSLDESPPEGI--KVGVNDDDFSTIF---ADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTL--KKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 649 +LA+E K + P G K N D +F I G T +E G++R+++L DFP +PPK F +FHPN+ +G +C++ L KDW PS+ ++ +LI ++ LL P E +A ++ +N EY + + Sbjct: 8 RLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVK 149
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBE2C_MOUSE (Ubiquitin-conjugating enzyme E2 C OS=Mus musculus GN=Ube2c PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14 Identity = 42/123 (34.15%), Postives = 66/123 (53.66%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKM 610 K+L +EL L S +GI D+ I G AGT YE+ +++ L +P++ P FLT +HPN+ T G IC++ LK W+ +R +L+ ++ LL EP +S LN A ++ Sbjct: 33 KRLQQELMILMTSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAEL 155
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC14_SCHPO (Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccharomyces pombe GN=ubc14 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14 Identity = 48/149 (32.21%), Postives = 71/149 (47.65%), Query Frame = 2 Query: 230 PNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKD-WNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAK 673 P+ ++L KE L E P I+V + DD+ GP+ + Y G F L D+P PP F T+I+HPN + G +C+ LK+ + PS+ LR VL + LL EP P+ L + + + + AR Y AK Sbjct: 6 PSSSRRLTKEYSDLREHPIPDIRVNLVDDNLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDPLVASIAEQYRNDRPSFDKIARDYVEQFAK 154
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC12_DICDI (NEDD8-conjugating enzyme Ubc12 OS=Dictyostelium discoideum GN=ube2m PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14 Identity = 38/130 (29.23%), Postives = 68/130 (52.31%), Query Frame = 2 Query: 263 KSLDESP-PEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 649 K +DE P G V D + F P Y++ F+ + + +P+ PPK + T ++HPNI G +C+N L++DW P L + V+ + L +EP P+ LN+ A +++++N + + + R Sbjct: 84 KDIDEMEVPTGCAVSFKDTNDILNFNLSITPTDGLYQSATFQFTINIPSTYPYDPPKVHCDTLVYHPNIDLEGHVCLNILRQDWMPVLNIGTVIFGLMTLFLEPNPDDPLNKDAAQLMIDNKKTFEANVR 213 The following BLAST results are available for this feature:
BLAST of FC875580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 219
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875580 ID=FC875580; Name=FC875580; organism=Citrus clementina; type=EST; length=706bpback to top |