FC875580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC12_XENTR (NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13 Identity = 36/113 (31.86%), Postives = 60/113 (53.10%), Query Frame = 2 Query: 284 PEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLEN 622 P+ ++ +D D F + P Y+ G F + +PH PPK T ++HPNI G +C+N L++DW P L + ++ ++ L +EP PE LN++A ++L N Sbjct: 44 PKTCEIEFSDHDDLLNFKLVICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNN 156
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC12_XENLA (NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13 Identity = 36/113 (31.86%), Postives = 60/113 (53.10%), Query Frame = 2 Query: 284 PEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLEN 622 P+ ++ +D D F + P Y+ G F + +PH PPK T ++HPNI G +C+N L++DW P L + ++ ++ L +EP PE LN++A ++L N Sbjct: 44 PKTCEIEFSDHDDLLNFKLVICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNN 156
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC9_DICDI (Sumo-conjugating enzyme ubc9 OS=Dictyostelium discoideum GN=ubc9 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13 Identity = 43/152 (28.29%), Postives = 77/152 (50.66%), Query Frame = 2 Query: 245 QLAKELKSLDESPPEGI--KVGVNDDDFSTIFA---DIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKK--DWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAKPK 679 +L++E K+ P G + N D ++ I G T +E GV+ + + + D+P PPK F FHPN+ +G +C++ L + DW PS+ ++ VL+ ++ LL P P+S + + L N EEY + + + ++ P+ Sbjct: 8 RLSEERKNWRRDHPYGFFARPSTNTDGSLNLYVWNCGIPGKTKTNWEGGVYPLIMEFTEDYPSKPPKCRFPKDFFHPNVYPSGTVCLSILNEEADWKPSVTIKTVLLGIQDLLDNPNPKSPAQQLPIHLFLTNKEEYDKKVKAQSKVYPPPQ 159
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC6_ARATH (Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana GN=UBC6 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 5.379e-13 Identity = 38/136 (27.94%), Postives = 70/136 (51.47%), Query Frame = 2 Query: 296 KVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNI-ATNGEICVNTLKKDWNPSLGLRHVL-IVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAKPKPKFSQE 697 KV +DD + GP + Y+ GV+++K+ L +P+ P F+ KI+HPN+ ++G +C++ + + W+P L +V + LL+ P P N +A +L+ + Y + Y +AKP+ S + Sbjct: 21 KVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYELKVKEYCEKYAKPEEILSDD 156
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC4_ARATH (Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4 PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13 Identity = 36/129 (27.91%), Postives = 69/129 (53.49%), Query Frame = 2 Query: 296 KVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNI-ATNGEICVNTLKKDWNPSLGLRHVL-IVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAKP 676 KV +D + + GP + Y+ GV+++++ L +P+ P F+TKI+HPN+ +G +C++ + + W+P L +V + LL+ P P LN +A +++ + Y + + Y +AKP Sbjct: 21 KVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEYCEKYAKP 149
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC4_WHEAT (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum GN=UBC4 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 35/130 (26.92%), Postives = 69/130 (53.08%), Query Frame = 2 Query: 296 KVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNI-ATNGEICVNTLKKDWNPSLGLRHVL-IVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAKPK 679 KV + +D F GP + Y+ GV+++++ L+ +P+ P F KI+HPN+ +G +C++ + + W+P L ++ + + LL+ P P LN +A +++ + Y + Y +AKP+ Sbjct: 21 KVDMINDGMHEFFVHFHGPKDSIYQGGVWKVRVELTEAYPYKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLLYPNPSDPLNGEAASLMMRDKNAYENKVKEYCERYAKPE 150
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC8_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC8 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12 Identity = 43/135 (31.85%), Postives = 70/135 (51.85%), Query Frame = 2 Query: 296 KVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNI-ATNGEICVNTLKKDWNPSLGLRHVL-IVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAKPKPKFSQ 694 +V + +D GP TPYENGV+R+ + L ++P+ P F+ KIFHPNI +G IC++ + W+P L +++ ++ LL EP LN +A + L + + Y + Y +A K K+ Q Sbjct: 21 QVDLINDSMQEFHVKFLGPKDTPYENGVWRLHVELPDNYPYKSPSIGFVNKIFHPNIDIASGSICLDVINSTWSPLYDLINIVEWMIPGLLKEPNGSDPLNNEAATLQLRDKKLYEEKIKEYIDKYA-TKEKYQQ 154
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: RCE1_ARATH (NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana GN=RCE1 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12 Identity = 42/135 (31.11%), Postives = 63/135 (46.67%), Query Frame = 2 Query: 245 QLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 649 +L K++ L+ I DD I+ G Y NG F +S +PH PK TK++HPNI G +C+N L++DW P L + V+ + L EP E LN A +L +N + + + R Sbjct: 34 RLHKDISELNLPSSCSISFPNGKDDLMNFEVSIKPDDGY-YHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNSEDPLNHDAAAVLRDNPKLFETNVR 167
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBE2Z_XENLA (Ubiquitin-conjugating enzyme E2 Z OS=Xenopus laevis GN=ube2z PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 5.947e-12 Identity = 47/161 (29.19%), Postives = 76/161 (47.20%), Query Frame = 2 Query: 215 NENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTK-----IFHPNIATNGEICVNTL----KKDWNPSLGLRHVLIVVRCLLIE-PF-PESALNEQAGKMLLENYEEYARHARIYTGI 664 NE + ++ +++ S+ + PP G+ V + D + I A I GP TPYE G F D+P PP+ +T F+PN NG++C++ L W+P+ L VLI ++ L+ E P+ E ++ +NY E RH I + Sbjct: 52 NERASTQCVLRIKRDIMSIYKEPPPGMFVVPDPHDMTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSLSSVLISIQSLMTENPYHNEPGFEQERHSGDSKNYNECIRHETIRVAV 212
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBE2Z_XENTR (Ubiquitin-conjugating enzyme E2 Z OS=Xenopus tropicalis GN=ube2z PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.767e-12 Identity = 47/161 (29.19%), Postives = 76/161 (47.20%), Query Frame = 2 Query: 215 NENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTK-----IFHPNIATNGEICVNTL----KKDWNPSLGLRHVLIVVRCLLIE-PF-PESALNEQAGKMLLENYEEYARHARIYTGI 664 NE + ++ +++ S+ + PP G+ V + D + I A I GP TPYE G F D+P PP+ +T F+PN NG++C++ L W+P+ L VLI ++ L+ E P+ E ++ +NY E RH I + Sbjct: 52 NERASNQCVLRIKRDIMSIYKEPPPGMFVVPDPHDMTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSLSSVLISIQSLMTENPYHNEPGFEQERHSGDSKNYNECIRHETIRVAV 212 The following BLAST results are available for this feature:
BLAST of FC875580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 219
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875580 ID=FC875580; Name=FC875580; organism=Citrus clementina; type=EST; length=706bpback to top |