FC875580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBE2S_BOVIN (Ubiquitin-conjugating enzyme E2 S OS=Bos taurus GN=UBE2S PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 2.819e-54 Identity = 96/150 (64.00%), Postives = 118/150 (78.67%), Query Frame = 2 Query: 218 ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIH 667 ENLPP++I+ + KE+ +L PP+GIKV N++D + + IEGP GTPY G+FRMKLLL DFP SPPKGYFLTKIFHPN+ NGEICVN LK+DW LG+RHVL+ ++CLLI P PESALNE+AG++LLENYEEYA AR+ T IH Sbjct: 6 ENLPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIH 155
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBE2S_RAT (Ubiquitin-conjugating enzyme E2 S OS=Rattus norvegicus GN=Ube2s PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 3.682e-54 Identity = 96/150 (64.00%), Postives = 118/150 (78.67%), Query Frame = 2 Query: 218 ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIH 667 ENLPP++I+ + KE+ +L PP+GIKV N++D + + IEGP GTPY G+FRMKLLL DFP SPPKGYFLTKIFHPN+ NGEICVN LK+DW LG+RHVL+ ++CLLI P PESALNE+AG++LLENYEEYA AR+ T IH Sbjct: 6 ENLPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIH 155
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBE2S_MOUSE (Ubiquitin-conjugating enzyme E2 S OS=Mus musculus GN=Ube2s PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 3.682e-54 Identity = 96/150 (64.00%), Postives = 118/150 (78.67%), Query Frame = 2 Query: 218 ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIH 667 ENLPP++I+ + KE+ +L PP+GIKV N++D + + IEGP GTPY G+FRMKLLL DFP SPPKGYFLTKIFHPN+ NGEICVN LK+DW LG+RHVL+ ++CLLI P PESALNE+AG++LLENYEEYA AR+ T IH Sbjct: 6 ENLPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIH 155
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UB2SA_XENLA (Ubiquitin-conjugating enzyme E2 S-A OS=Xenopus laevis GN=ube2s-A PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 3.682e-54 Identity = 96/150 (64.00%), Postives = 118/150 (78.67%), Query Frame = 2 Query: 218 ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIH 667 ENLPP++I+ + KE+ +L PP+GIKV N++D + + IEGP GTPY G+FRMKLLL DFP SPPKGYFLTKIFHPN+ NGEICVN LK+DW LG+RHVL+ ++CLLI P PESALNE+AG++LLENYEEYA AR+ T IH Sbjct: 6 ENLPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIH 155
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBE2S_DANRE (Ubiquitin-conjugating enzyme E2 S OS=Danio rerio GN=ube2s PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 3.810e-51 Identity = 91/151 (60.26%), Postives = 115/151 (76.16%), Query Frame = 2 Query: 218 ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 ENLPP V++ + KE+ +L PPEGIK+ +++D + + IEGP GTPY GVFRM+L+L DFP PP+GYFLTKIFHPN+ GEICVN LK+DW LGLRHVL+ ++CLLI P PESALNE+AGK+LLE+Y+EYA A + T IHA Sbjct: 6 ENLPPQVLRLVYKEVSALAADPPEGIKIYPSEEDITELHTSIEGPEGTPYAGGVFRMRLVLGKDFPAVPPRGYFLTKIFHPNVGHKGEICVNVLKRDWKAELGLRHVLLTIKCLLIHPNPESALNEEAGKLLLEDYKEYASRAHLLTEIHA 156
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBE2S_DICDI (Ubiquitin-conjugating enzyme E2 S OS=Dictyostelium discoideum GN=ube2s PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 9.385e-50 Identity = 88/153 (57.52%), Postives = 119/153 (77.78%), Query Frame = 2 Query: 212 TNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 ++ENLPP+VIK++ KELK L+ S EGI + ++D + I A + GPAGTPYE G F+ +L+LS DFP SPPK F+TKIFHPN++ GEICVNTLKKDW LGL+H+L+ ++CLLI P ES+LNE A ++LLENY++Y +HA+++T IHA Sbjct: 2 SSENLPPDVIKRVVKELKELNSSTLEGITLLPCEEDITNIEAVVTGPAGTPYEGGYFKARLILSSDFPRSPPKANFITKIFHPNVSKKGEICVNTLKKDWTEDLGLKHILLTIKCLLIVPNAESSLNEDASRLLLENYDDYCKHAKLFTSIHA 154
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC13_YEAST (Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae GN=UBC13 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.125e-25 Identity = 57/148 (38.51%), Postives = 86/148 (58.11%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAKPKPK 685 K++ KE + L P GI +DD+ IEGP +PYE+G+F ++L L D+P PK FLTKI+HPNI G IC++ LK +W+P+L +R VL+ ++ LL P P L + ++N + AR +T ++AK KP+ Sbjct: 6 KRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAKKKPE 153
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC13_SCHPO (Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe GN=ubc13 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.328e-24 Identity = 54/143 (37.76%), Postives = 85/143 (59.44%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 K++ KE+++L PP GI +D+ +EGP + YE G F ++L L ++P PP FLTKI+HPN+ G IC++TLKKDW+P+L +R VL+ ++ L+ P P+ L+ K+ EN + +AR +T +A Sbjct: 5 KRIIKEIETLTRDPPPGIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWKENEPQAIANAREWTKKYA 147
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC1_SCHPO (Ubiquitin-conjugating enzyme E2 1 OS=Schizosaccharomyces pombe GN=ubc1 PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 3.361e-23 Identity = 54/147 (36.73%), Postives = 87/147 (59.18%), Query Frame = 2 Query: 233 NVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIAT-NGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 N +++AKEL + + GI+V +DD S + GP GTPYE G F + + + D+P PPK F TKI+HPN+++ G IC++ LK W+P ++ LI ++ LL P P + + Q ++ L+NY+++ R AR +T +A Sbjct: 4 NRSRRIAKELADVQQDKQAGIQVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQVAQVYLQNYQQFVRTAREWTSSYA 150
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.733e-23 Identity = 48/133 (36.09%), Postives = 81/133 (60.90%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYAR 640 ++L ++ K L E PP G+ ++++ A I GP GTP+E+G F++ + S ++P+ PP FL+K+FHPN+ +G IC++ L+ W+P+ + +L ++ LL EP P S N QA ++ EN EY + Sbjct: 7 RRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEK 139 The following BLAST results are available for this feature:
BLAST of FC875580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 219
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875580 ID=FC875580; Name=FC875580; organism=Citrus clementina; type=EST; length=706bpback to top |