FC875580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UB2L6_HUMAN (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Homo sapiens GN=UBE2L6 PE=1 SV=4) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 38/139 (27.34%), Postives = 68/139 (48.92%), Query Frame = 2 Query: 245 QLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTL-KKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYT 658 ++ KEL+ L + PP ++ +DD ++ + P PY F +++ ++P PP F TKI+HPN+ NG+IC+ + ++W P VL + L+ P L +L +N E + ++A +T Sbjct: 6 RVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLLPDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFT 144
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UB2L6_BOVIN (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Bos taurus GN=UBE2L6 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 37/140 (26.43%), Postives = 74/140 (52.86%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTL-KKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYT 658 K++AKEL+ L + P+ ++ +++D ++ + P PY FR+ + ++P PP F T+I+HPN+ +G +C+ + KK+W S VL + L+ +P P + + + L ++ E + + A+ +T Sbjct: 5 KRVAKELEDLQKELPKYLRNLCSEEDNVLVWHALLLPERPPYNLKAFRLCISFPREYPFQPPTVKFTTRIYHPNVDRDGRVCLPIISKKNWKASTRTCQVLEALNMLVNQPEPGQPVRLELAEQLTQDPELFDQMAQEFT 144
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UB2L3_MOUSE (Ubiquitin-conjugating enzyme E2 L3 OS=Mus musculus GN=Ube2l3 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 36/148 (24.32%), Postives = 76/148 (51.35%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLK-KDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAKPKP 682 ++L KEL+ + + + + D+ + + P PY+ G FR+++ ++P PPK F TKI+HPNI G++C+ + ++W P+ V+ + L+ +P PE L + ++ +++ ++A +T + + +P Sbjct: 5 RRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIVPDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGEKRP 152
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UB2L3_HUMAN (Ubiquitin-conjugating enzyme E2 L3 OS=Homo sapiens GN=UBE2L3 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 36/148 (24.32%), Postives = 76/148 (51.35%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLK-KDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAKPKP 682 ++L KEL+ + + + + D+ + + P PY+ G FR+++ ++P PPK F TKI+HPNI G++C+ + ++W P+ V+ + L+ +P PE L + ++ +++ ++A +T + + +P Sbjct: 5 RRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIVPDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGEKRP 152
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UB2L3_BOVIN (Ubiquitin-conjugating enzyme E2 L3 OS=Bos taurus GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 36/148 (24.32%), Postives = 76/148 (51.35%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLK-KDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAKPKP 682 ++L KEL+ + + + + D+ + + P PY+ G FR+++ ++P PPK F TKI+HPNI G++C+ + ++W P+ V+ + L+ +P PE L + ++ +++ ++A +T + + +P Sbjct: 5 RRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIVPDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGEKRP 152
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UB12L_ARATH (Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis thaliana GN=RCE2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 33/95 (34.74%), Postives = 52/95 (54.74%), Query Frame = 2 Query: 365 YENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 649 Y +G F +S+ +PH PK TK++HPNI G +C+N L++DW P L + V+ + L EP E LN +A +L +N + + + R Sbjct: 74 YLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTFEYNVR 168
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UB2L3_PONAB (Ubiquitin-conjugating enzyme E2 L3 OS=Pongo abelii GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.034e-11 Identity = 36/148 (24.32%), Postives = 76/148 (51.35%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLK-KDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAKPKP 682 ++L KEL+ + + + + D+ + + P PY+ G FR+++ ++P PPK F TKI+HPNI G++C+ + ++W P+ V+ + L+ +P PE L + ++ +++ ++A +T + + +P Sbjct: 5 RRLMKELEEIRKCGMKNFRNIRVDEANLLTWQGLIVPDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGEKRP 152
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC14_ARATH (Ubiquitin-conjugating enzyme E2 14 OS=Arabidopsis thaliana GN=UBC14 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 40/147 (27.21%), Postives = 71/147 (48.30%), Query Frame = 2 Query: 248 LAKELKSLDESPPEGIKVGVNDDDFSTIF---ADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTL-------------KKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYAR 640 L K+LK L + P +G G+ D+ +F I GP T YE G F + ++P SPP F ++++HPN+ ++G++C++ L + W P + +++ + +L P ES N +A K +N E+ + Sbjct: 10 LQKQLKDLCKKPVDGFSAGLVDE--KNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDNRAEFRK 154
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC13_ARATH (Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis thaliana GN=UBC13 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 42/147 (28.57%), Postives = 69/147 (46.94%), Query Frame = 2 Query: 248 LAKELKSLDESPPEGIKVGVNDDDFSTIF---ADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTL-------------KKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYAR 640 L K+LK L + P +G G+ D+ IF I GP T YE G F + ++P+SPP F + I+HPN+ +G +C++ L + W P + +++ + +L P ES N +A K E +E+ + Sbjct: 9 LQKQLKDLCKHPVDGFSAGLVDE--KNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWREKRDEFKK 153 The following BLAST results are available for this feature:
BLAST of FC875580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 219
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875580 ID=FC875580; Name=FC875580; organism=Citrus clementina; type=EST; length=706bpback to top |